RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 KLHL35Q6PF15 583 aa16.84■□□□□ 0.29
RTN3-205ENST00000356000 POTEEQ6S8J3 1075 aa16.84■□□□□ 0.29
RTN3-205ENST00000356000 TRIM67Q6ZTA4 783 aa16.84■□□□□ 0.29
RTN3-205ENST00000356000 UHMK1Q8TAS1 419 aaKnown RBP16.84■□□□□ 0.29
RTN3-205ENST00000356000 ECSITQ9BQ95 431 aa16.84■□□□□ 0.29
RTN3-205ENST00000356000 PACSIN1Q9BY11 444 aa16.84■□□□□ 0.29
RTN3-205ENST00000356000 NT5C3AQ9H0P0 336 aa16.84■□□□□ 0.29
RTN3-205ENST00000356000 FAM196BA6NMK8 535 aa16.83■□□□□ 0.29
RTN3-205ENST00000356000 TLR2O60603 784 aa16.83■□□□□ 0.29
RTN3-205ENST00000356000 PLTPP55058 493 aa16.83■□□□□ 0.29
RTN3-205ENST00000356000 MOGSQ13724 837 aa16.83■□□□□ 0.29
RTN3-205ENST00000356000 MPP2Q14168 576 aa16.83■□□□□ 0.29
RTN3-205ENST00000356000 RABL6Q3YEC7 729 aaPredicted RBP16.83■□□□□ 0.29
RTN3-205ENST00000356000 ACAD11Q709F0 780 aa16.83■□□□□ 0.29
RTN3-205ENST00000356000 SAMD3Q8N6K7 520 aa16.83■□□□□ 0.29
RTN3-205ENST00000356000 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.83■□□□□ 0.291e-10■■■□□ 14.8
RTN3-205ENST00000356000 FBXO25Q8TCJ0 367 aa16.83■□□□□ 0.29
RTN3-205ENST00000356000 SRPK1Q96SB4 655 aaKnown RBP16.83■□□□□ 0.29
RTN3-205ENST00000356000 GPR108Q9NPR9 543 aa16.83■□□□□ 0.29
RTN3-205ENST00000356000 CRABP2P29373 138 aa16.83■□□□□ 0.28
RTN3-205ENST00000356000 ARFIP2P53365 341 aa16.83■□□□□ 0.28
RTN3-205ENST00000356000 LRRC8BQ6P9F7 803 aa16.83■□□□□ 0.28
RTN3-205ENST00000356000 SLC2A7Q6PXP3 512 aa16.83■□□□□ 0.28
RTN3-205ENST00000356000 IZUMO2Q6UXV1 221 aa16.83■□□□□ 0.28
RTN3-205ENST00000356000 NUP93Q8N1F7 819 aa16.83■□□□□ 0.28
RTN3-205ENST00000356000 STMN2Q93045 179 aa16.83■□□□□ 0.28
RTN3-205ENST00000356000 EIF2AQ9BY44 585 aaKnown RBP16.83■□□□□ 0.28
RTN3-205ENST00000356000 PUS7LQ9H0K6 701 aaKnown RBP16.83■□□□□ 0.28
RTN3-205ENST00000356000 KCNK9Q9NPC2 374 aa16.83■□□□□ 0.28
RTN3-205ENST00000356000 SAR1AQ9NR31 198 aa16.83■□□□□ 0.28
RTN3-205ENST00000356000 STXBP5LQ9Y2K9 1186 aa16.83■□□□□ 0.28
RTN3-205ENST00000356000 TDRKHQ9Y2W6 561 aaKnown RBP16.83■□□□□ 0.28
RTN3-205ENST00000356000 VILLO15195 856 aa16.83■□□□□ 0.28
RTN3-205ENST00000356000 ACADVLP49748 655 aa16.83■□□□□ 0.28
RTN3-205ENST00000356000 SPIDRQ14159 915 aa16.83■□□□□ 0.28
RTN3-205ENST00000356000 Q6ZNX1 250 aa16.83■□□□□ 0.28
RTN3-205ENST00000356000 OTUD6AQ7L8S5 288 aa16.83■□□□□ 0.28
RTN3-205ENST00000356000 ALDH16A1Q8IZ83 802 aa16.83■□□□□ 0.28
RTN3-205ENST00000356000 APPBP2Q92624 585 aa16.83■□□□□ 0.28
RTN3-205ENST00000356000 SHISA4Q96DD7 197 aa16.83■□□□□ 0.28
RTN3-205ENST00000356000 ANGPTL2Q9UKU9 493 aa16.83■□□□□ 0.28
RTN3-205ENST00000356000 FADS3Q9Y5Q0 445 aa16.83■□□□□ 0.28
RTN3-205ENST00000356000 FAM187AA6NFU0 413 aa16.82■□□□□ 0.28
RTN3-205ENST00000356000 CA8P35219 290 aa16.82■□□□□ 0.28
RTN3-205ENST00000356000 VPS41P49754 854 aa16.82■□□□□ 0.28
RTN3-205ENST00000356000 PTENP60484 403 aa16.82■□□□□ 0.28
RTN3-205ENST00000356000 TIMM10P62072 90 aa16.82■□□□□ 0.28
RTN3-205ENST00000356000 IL17AQ16552 155 aa16.82■□□□□ 0.28
RTN3-205ENST00000356000 RTN1Q16799 776 aa16.82■□□□□ 0.28
RTN3-205ENST00000356000 TTC38Q5R3I4 469 aa16.82■□□□□ 0.28
RTN3-205ENST00000356000 RIC3Q7Z5B4 369 aa16.82■□□□□ 0.28
RTN3-205ENST00000356000 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.82■□□□□ 0.28
RTN3-205ENST00000356000 TTC7AQ9ULT0 858 aaPredicted RBP16.82■□□□□ 0.28
RTN3-205ENST00000356000 SYNPO2Q9UMS6 1093 aa16.82■□□□□ 0.28
RTN3-205ENST00000356000 WASF2Q9Y6W5 498 aa16.82■□□□□ 0.28
RTN3-205ENST00000356000 A0A087X0T9 212 aa16.82■□□□□ 0.28
RTN3-205ENST00000356000 E9PBE3 544 aa16.82■□□□□ 0.28
RTN3-205ENST00000356000 EIF3FO00303 357 aaPredicted RBP16.82■□□□□ 0.28
RTN3-205ENST00000356000 OPHN1O60890 802 aa16.82■□□□□ 0.28
RTN3-205ENST00000356000 PDE5AO76074 875 aa16.82■□□□□ 0.28
RTN3-205ENST00000356000 FAM228BP0C875 321 aa16.82■□□□□ 0.28
RTN3-205ENST00000356000 ATP5DP30049 168 aa16.82■□□□□ 0.28
RTN3-205ENST00000356000 KRT2P35908 639 aa16.82■□□□□ 0.28
RTN3-205ENST00000356000 PTGER2P43116 358 aa16.82■□□□□ 0.28
RTN3-205ENST00000356000 DR1Q01658 176 aa16.82■□□□□ 0.28
RTN3-205ENST00000356000 C16orf87Q6PH81 154 aa16.82■□□□□ 0.28
RTN3-205ENST00000356000 BBS5Q8N3I7 341 aa16.82■□□□□ 0.28
RTN3-205ENST00000356000 BHMT2Q9H2M3 363 aa16.82■□□□□ 0.28
RTN3-205ENST00000356000 GOLPH3Q9H4A6 298 aa16.82■□□□□ 0.28
RTN3-205ENST00000356000 USP29Q9HBJ7 922 aa16.82■□□□□ 0.28
RTN3-205ENST00000356000 ATP6V0A2Q9Y487 856 aa16.82■□□□□ 0.28
RTN3-205ENST00000356000 MYPNQ86TC9 1320 aa16.81■□□□□ 0.28
RTN3-205ENST00000356000 KIAA0391O15091 583 aaKnown RBP16.81■□□□□ 0.28
RTN3-205ENST00000356000 GSTT2P0CG29 244 aa16.81■□□□□ 0.28
RTN3-205ENST00000356000 GSTT2BP0CG30 244 aa16.81■□□□□ 0.28
RTN3-205ENST00000356000 FOXN2P32314 431 aa16.81■□□□□ 0.28
RTN3-205ENST00000356000 NEK2P51955 445 aa16.81■□□□□ 0.28
RTN3-205ENST00000356000 TCIRG1Q13488 830 aa16.81■□□□□ 0.28
RTN3-205ENST00000356000 HNRNPDQ14103 355 aaKnown RBP16.81■□□□□ 0.28
RTN3-205ENST00000356000 PPP2R5EQ16537 467 aa16.81■□□□□ 0.28
RTN3-205ENST00000356000 MAN2A1Q16706 1144 aa16.81■□□□□ 0.28
RTN3-205ENST00000356000 SMUG1Q53HV7 270 aa16.81■□□□□ 0.28
RTN3-205ENST00000356000 KIAA1755Q5JYT7 1200 aa16.81■□□□□ 0.28
RTN3-205ENST00000356000 SERPINB12Q96P63 405 aa16.81■□□□□ 0.28
RTN3-205ENST00000356000 FNBP1Q96RU3 617 aa16.81■□□□□ 0.28
RTN3-205ENST00000356000 GPAA1O43292 621 aa16.81■□□□□ 0.28
RTN3-205ENST00000356000 NDUFB5O43674 189 aa16.81■□□□□ 0.28
RTN3-205ENST00000356000 STRN3Q13033 797 aa16.81■□□□□ 0.28
RTN3-205ENST00000356000 ARHGEF18Q6ZSZ5 1173 aa16.81■□□□□ 0.28
RTN3-205ENST00000356000 PROM2Q8N271 834 aa16.81■□□□□ 0.28
RTN3-205ENST00000356000 HSPBAP1Q96EW2 488 aa16.81■□□□□ 0.28
RTN3-205ENST00000356000 EMILIN3Q9NT22 766 aa16.81■□□□□ 0.28
RTN3-205ENST00000356000 MAGEB2O15479 319 aa16.8■□□□□ 0.28
RTN3-205ENST00000356000 GSC2O15499 205 aa16.8■□□□□ 0.28
RTN3-205ENST00000356000 CCDC22O60826 627 aa16.8■□□□□ 0.28
RTN3-205ENST00000356000 CCDC82Q8N4S0 544 aa16.8■□□□□ 0.28
RTN3-205ENST00000356000 LBHD1Q9BQE6 289 aaPredicted RBP16.8■□□□□ 0.28
RTN3-205ENST00000356000 BTBD10Q9BSF8 475 aa16.8■□□□□ 0.28
RTN3-205ENST00000356000 TAOK3Q9H2K8 898 aa16.8■□□□□ 0.28
RTN3-205ENST00000356000 LGR6Q9HBX8 967 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms