RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 TFDP1Q14186 410 aa18.54■□□□□ 0.56
PDLIM7-201ENST00000355572 PUS10Q3MIT2 529 aaKnown RBP18.54■□□□□ 0.56
PDLIM7-201ENST00000355572 EEF1DP3Q658K8 133 aa18.54■□□□□ 0.56
PDLIM7-201ENST00000355572 NOTUMQ6P988 496 aa18.54■□□□□ 0.56
PDLIM7-201ENST00000355572 ADHFE1Q8IWW8 467 aa18.54■□□□□ 0.56
PDLIM7-201ENST00000355572 VPS52Q8N1B4 723 aa18.54■□□□□ 0.56
PDLIM7-201ENST00000355572 SNX29Q8TEQ0 813 aa18.54■□□□□ 0.56
PDLIM7-201ENST00000355572 PGBD4Q96DM1 585 aa18.54■□□□□ 0.56
PDLIM7-201ENST00000355572 PNMA5Q96PV4 448 aa18.54■□□□□ 0.56
PDLIM7-201ENST00000355572 FZD8Q9H461 694 aa18.54■□□□□ 0.56
PDLIM7-201ENST00000355572 MYH15Q9Y2K3 1946 aa18.54■□□□□ 0.56
PDLIM7-201ENST00000355572 PDCD11Q14690 1871 aaKnown RBP18.54■□□□□ 0.56
PDLIM7-201ENST00000355572 ARHGEF35A5YM69 484 aa18.53■□□□□ 0.56
PDLIM7-201ENST00000355572 ARL5CA6NH57 179 aa18.53■□□□□ 0.56
PDLIM7-201ENST00000355572 PI4K2BG5E9Z4 385 aa18.53■□□□□ 0.56
PDLIM7-201ENST00000355572 INPPL1O15357 1258 aa18.53■□□□□ 0.56
PDLIM7-201ENST00000355572 ITGA4P13612 1032 aa18.53■□□□□ 0.56
PDLIM7-201ENST00000355572 AXLP30530 894 aa18.53■□□□□ 0.56
PDLIM7-201ENST00000355572 ALDH7A1P49419 539 aaKnown RBP18.53■□□□□ 0.56
PDLIM7-201ENST00000355572 ATP2C1P98194 919 aaPredicted RBP18.53■□□□□ 0.56
PDLIM7-201ENST00000355572 RNASELQ05823 741 aaKnown RBP18.53■□□□□ 0.56
PDLIM7-201ENST00000355572 MAPK7Q13164 816 aa18.53■□□□□ 0.56
PDLIM7-201ENST00000355572 PPP4R3CPQ6ZMV5 832 aa18.53■□□□□ 0.56
PDLIM7-201ENST00000355572 TAS1R1Q7RTX1 841 aa18.53■□□□□ 0.56
PDLIM7-201ENST00000355572 COLGALT2Q8IYK4 626 aa18.53■□□□□ 0.56
PDLIM7-201ENST00000355572 MRPL43Q8N983 215 aaKnown RBP18.53■□□□□ 0.56
PDLIM7-201ENST00000355572 ERMNQ8TAM6 284 aa18.53■□□□□ 0.56
PDLIM7-201ENST00000355572 RABGGTAQ92696 567 aa18.53■□□□□ 0.56
PDLIM7-201ENST00000355572 RUSC1Q9BVN2 902 aa18.53■□□□□ 0.56
PDLIM7-201ENST00000355572 PDZD7Q9H5P4 517 aa18.53■□□□□ 0.56
PDLIM7-201ENST00000355572 KLK14Q9P0G3 267 aa18.53■□□□□ 0.56
PDLIM7-201ENST00000355572 HCFC2Q9Y5Z7 792 aa18.53■□□□□ 0.56
PDLIM7-201ENST00000355572 CNTNAP2Q9UHC6 1331 aa18.52■□□□□ 0.56
PDLIM7-201ENST00000355572 A0A1B0GUA9 196 aa18.52■□□□□ 0.56
PDLIM7-201ENST00000355572 NRP1O14786 923 aa18.52■□□□□ 0.56
PDLIM7-201ENST00000355572 EFEMP2O95967 443 aa18.52■□□□□ 0.56
PDLIM7-201ENST00000355572 KRT17Q04695 432 aa18.52■□□□□ 0.56
PDLIM7-201ENST00000355572 GRIN1Q05586 938 aa18.52■□□□□ 0.56
PDLIM7-201ENST00000355572 DSC1Q08554 894 aa18.52■□□□□ 0.56
PDLIM7-201ENST00000355572 PDE12Q6L8Q7 609 aaKnown RBP18.52■□□□□ 0.56
PDLIM7-201ENST00000355572 ANKRD54Q6NXT1 300 aa18.52■□□□□ 0.56
PDLIM7-201ENST00000355572 TMEM184AQ6ZMB5 413 aa18.52■□□□□ 0.56
PDLIM7-201ENST00000355572 DDX53Q86TM3 631 aaKnown RBP18.52■□□□□ 0.56
PDLIM7-201ENST00000355572 MCPH1Q8NEM0 835 aa18.52■□□□□ 0.56
PDLIM7-201ENST00000355572 SUSD6Q92537 303 aa18.52■□□□□ 0.56
PDLIM7-201ENST00000355572 PPP2R3CQ969Q6 453 aa18.52■□□□□ 0.56
PDLIM7-201ENST00000355572 TMEM169Q96HH4 297 aa18.52■□□□□ 0.56
PDLIM7-201ENST00000355572 LRFN3Q9BTN0 628 aa18.52■□□□□ 0.56
PDLIM7-201ENST00000355572 NGRNQ9NPE2 291 aaKnown RBP18.52■□□□□ 0.56
PDLIM7-201ENST00000355572 PUF60Q9UHX1 559 aaKnown RBP18.52■□□□□ 0.56
PDLIM7-201ENST00000355572 MTCL1Q9Y4B5 1905 aaKnown RBP18.52■□□□□ 0.56
PDLIM7-201ENST00000355572 CXCL14O95715 111 aa18.51■□□□□ 0.55
PDLIM7-201ENST00000355572 SSBP05455 408 aaKnown RBP eCLIP18.51■□□□□ 0.55
PDLIM7-201ENST00000355572 EPCAMP16422 314 aa18.51■□□□□ 0.55
PDLIM7-201ENST00000355572 COL9A1P20849 921 aa18.51■□□□□ 0.55
PDLIM7-201ENST00000355572 IGFBP6P24592 240 aaPredicted RBP18.51■□□□□ 0.55
PDLIM7-201ENST00000355572 PRPHP41219 470 aa18.51■□□□□ 0.55
PDLIM7-201ENST00000355572 CUL4AQ13619 759 aa18.51■□□□□ 0.55
PDLIM7-201ENST00000355572 PDIA5Q14554 519 aa18.51■□□□□ 0.55
PDLIM7-201ENST00000355572 SMC1AQ14683 1233 aaKnown RBP18.51■□□□□ 0.55
PDLIM7-201ENST00000355572 PTPN14Q15678 1187 aa18.51■□□□□ 0.55
PDLIM7-201ENST00000355572 HAUS3Q68CZ6 603 aa18.51■□□□□ 0.55
PDLIM7-201ENST00000355572 TAS1R3Q7RTX0 852 aa18.51■□□□□ 0.55
PDLIM7-201ENST00000355572 URGCPQ8TCY9 931 aa18.51■□□□□ 0.55
PDLIM7-201ENST00000355572 PLIN2Q99541 437 aa18.51■□□□□ 0.55
PDLIM7-201ENST00000355572 CDCA3Q99618 268 aaPredicted RBP18.51■□□□□ 0.55
PDLIM7-201ENST00000355572 PAAF1Q9BRP4 392 aa18.51■□□□□ 0.55
PDLIM7-201ENST00000355572 PRKAG3Q9UGI9 489 aa18.51■□□□□ 0.55
PDLIM7-201ENST00000355572 SMC3Q9UQE7 1217 aa18.51■□□□□ 0.55
PDLIM7-201ENST00000355572 PRG3Q9Y2Y8 225 aaPredicted RBP18.51■□□□□ 0.55
PDLIM7-201ENST00000355572 CITO14578 2027 aa18.5■□□□□ 0.55
PDLIM7-201ENST00000355572 MYO10Q9HD67 2058 aa18.5■□□□□ 0.55
PDLIM7-201ENST00000355572 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.5■□□□□ 0.55
PDLIM7-201ENST00000355572 WEE2P0C1S8 567 aa18.5■□□□□ 0.55
PDLIM7-201ENST00000355572 CTSAP10619 480 aa18.5■□□□□ 0.55
PDLIM7-201ENST00000355572 LIG1P18858 919 aa18.5■□□□□ 0.55
PDLIM7-201ENST00000355572 MUTP22033 750 aa18.5■□□□□ 0.55
PDLIM7-201ENST00000355572 NAMPTP43490 491 aa18.5■□□□□ 0.55
PDLIM7-201ENST00000355572 PCBP1Q15365 356 aaKnown RBP eCLIP18.5■□□□□ 0.553e-7■■■■■ 32.7
PDLIM7-201ENST00000355572 FAM187BQ17R55 369 aa18.5■□□□□ 0.55
PDLIM7-201ENST00000355572 NT5DC1Q5TFE4 455 aa18.5■□□□□ 0.55
PDLIM7-201ENST00000355572 SLC27A1Q6PCB7 646 aa18.5■□□□□ 0.55
PDLIM7-201ENST00000355572 RNF168Q8IYW5 571 aaPredicted RBP18.5■□□□□ 0.55
PDLIM7-201ENST00000355572 C12orf76Q8N812 135 aaPredicted RBP18.5■□□□□ 0.55
PDLIM7-201ENST00000355572 SLC22A17Q8WUG5 538 aa18.5■□□□□ 0.55
PDLIM7-201ENST00000355572 CCDC51Q96ER9 411 aa18.5■□□□□ 0.55
PDLIM7-201ENST00000355572 BACH2Q9BYV9 841 aa18.5■□□□□ 0.55
PDLIM7-201ENST00000355572 UPF2Q9HAU5 1272 aaKnown RBP18.5■□□□□ 0.55
PDLIM7-201ENST00000355572 GTF3C3Q9Y5Q9 886 aa18.5■□□□□ 0.55
PDLIM7-201ENST00000355572 DOCK6Q96HP0 2047 aa18.5■□□□□ 0.55
PDLIM7-201ENST00000355572 PTGESO14684 152 aa18.49■□□□□ 0.55
PDLIM7-201ENST00000355572 LILRB3O75022 631 aa18.49■□□□□ 0.55
PDLIM7-201ENST00000355572 PRKCBP05771 671 aa18.49■□□□□ 0.55
PDLIM7-201ENST00000355572 CA8P35219 290 aa18.49■□□□□ 0.55
PDLIM7-201ENST00000355572 RILPL1Q5EBL4 403 aa18.49■□□□□ 0.55
PDLIM7-201ENST00000355572 RINT1Q6NUQ1 792 aa18.49■□□□□ 0.55
PDLIM7-201ENST00000355572 DTHD1Q6ZMT9 781 aa18.49■□□□□ 0.55
PDLIM7-201ENST00000355572 C1orf186Q6ZWK4 172 aa18.49■□□□□ 0.55
PDLIM7-201ENST00000355572 CNNM3Q8NE01 707 aa18.49■□□□□ 0.55
PDLIM7-201ENST00000355572 B3GALT6Q96L58 329 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms