RNA–Protein interactions for RNA: ENST00000355371.8

SHTN1-202, Transcript of shootin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SHTN1, Length 5,361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-202ENST00000355371 C19orf81C9J6K1 198 aa17.4■□□□□ 0.38
SHTN1-202ENST00000355371 GCKP35557 465 aa17.4■□□□□ 0.38
SHTN1-202ENST00000355371 NR1I3Q14994 352 aa17.4■□□□□ 0.38
SHTN1-202ENST00000355371 LINC00116Q8NCU8 138 aa17.4■□□□□ 0.38
SHTN1-202ENST00000355371 RBM46Q8TBY0 533 aaKnown RBP17.4■□□□□ 0.38
SHTN1-202ENST00000355371 PACSIN2Q9UNF0 486 aaPredicted RBP17.4■□□□□ 0.38
SHTN1-202ENST00000355371 ORC6Q9Y5N6 252 aa17.4■□□□□ 0.38
SHTN1-202ENST00000355371 CNTNAP4Q9C0A0 1308 aa17.4■□□□□ 0.38
SHTN1-202ENST00000355371 RASIP1Q5U651 963 aa17.4■□□□□ 0.38
SHTN1-202ENST00000355371 TTC17Q96AE7 1141 aa17.4■□□□□ 0.38
SHTN1-202ENST00000355371 ZNF560Q96MR9 790 aa17.4■□□□□ 0.38
SHTN1-202ENST00000355371 KRT14P02533 472 aa17.39■□□□□ 0.38
SHTN1-202ENST00000355371 PDHBP11177 359 aa17.39■□□□□ 0.38
SHTN1-202ENST00000355371 MAGOHP61326 146 aaKnown RBP17.39■□□□□ 0.38
SHTN1-202ENST00000355371 OTUD5Q96G74 571 aa17.39■□□□□ 0.38
SHTN1-202ENST00000355371 TRIM62Q9BVG3 475 aa17.39■□□□□ 0.38
SHTN1-202ENST00000355371 FAM217BQ9NTX9 383 aaPredicted RBP17.39■□□□□ 0.38
SHTN1-202ENST00000355371 APEX2Q9UBZ4 518 aa17.39■□□□□ 0.38
SHTN1-202ENST00000355371 SNX12Q9UMY4 172 aa17.39■□□□□ 0.38
SHTN1-202ENST00000355371 FIS1Q9Y3D6 152 aa17.39■□□□□ 0.38
SHTN1-202ENST00000355371 CNTNAP5Q8WYK1 1306 aa17.39■□□□□ 0.37
SHTN1-202ENST00000355371 STAT5BP51692 787 aa17.39■□□□□ 0.37
SHTN1-202ENST00000355371 NKX1-1Q15270 411 aaPredicted RBP17.39■□□□□ 0.37
SHTN1-202ENST00000355371 RASGRP2Q7LDG7 609 aa17.39■□□□□ 0.37
SHTN1-202ENST00000355371 SPATA4Q8NEY3 305 aa17.39■□□□□ 0.37
SHTN1-202ENST00000355371 HSPBP1Q9NZL4 362 aa17.39■□□□□ 0.37
SHTN1-202ENST00000355371 ZC3H13Q5T200 1668 aaKnown RBP17.39■□□□□ 0.37
SHTN1-202ENST00000355371 GNGT2O14610 69 aa17.39■□□□□ 0.37
SHTN1-202ENST00000355371 MAP3K7O43318 606 aa17.39■□□□□ 0.37
SHTN1-202ENST00000355371 ROR1Q01973 937 aa17.39■□□□□ 0.37
SHTN1-202ENST00000355371 HEATR6Q6AI08 1181 aaKnown RBP17.39■□□□□ 0.37
SHTN1-202ENST00000355371 SYDE1Q6ZW31 735 aaPredicted RBP17.39■□□□□ 0.37
SHTN1-202ENST00000355371 MAGEB5Q9BZ81 275 aa17.39■□□□□ 0.37
SHTN1-202ENST00000355371 GSTA4O15217 222 aa17.39■□□□□ 0.37
SHTN1-202ENST00000355371 SKIP12755 728 aa17.39■□□□□ 0.37
SHTN1-202ENST00000355371 ZC3H15Q8WU90 426 aaKnown RBP17.39■□□□□ 0.37
SHTN1-202ENST00000355371 FSD1LQ9BXM9 530 aa17.39■□□□□ 0.37
SHTN1-202ENST00000355371 TEX13BQ9BXU2 312 aa17.39■□□□□ 0.37
SHTN1-202ENST00000355371 AGLP35573 1532 aa17.39■□□□□ 0.37
SHTN1-202ENST00000355371 FDPSP14324 419 aaKnown RBP17.39■□□□□ 0.37
SHTN1-202ENST00000355371 GUCY2CP25092 1073 aa17.39■□□□□ 0.37
SHTN1-202ENST00000355371 BCAR1P56945 870 aa17.39■□□□□ 0.37
SHTN1-202ENST00000355371 CDC42EP1Q00587 391 aa17.39■□□□□ 0.37
SHTN1-202ENST00000355371 MTMR2Q13614 643 aa17.39■□□□□ 0.37
SHTN1-202ENST00000355371 ITPRIPL1Q6GPH6 555 aa17.39■□□□□ 0.37
SHTN1-202ENST00000355371 URGCPQ8TCY9 931 aa17.39■□□□□ 0.37
SHTN1-202ENST00000355371 REEP2Q9BRK0 252 aa17.39■□□□□ 0.37
SHTN1-202ENST00000355371 SPATA31A6Q5VVP1 1343 aa17.38■□□□□ 0.37
SHTN1-202ENST00000355371 NPHP3-ACAD11A0A0J9YXS1 232 aa17.38■□□□□ 0.37
SHTN1-202ENST00000355371 ASAP2O43150 1006 aa17.38■□□□□ 0.37
SHTN1-202ENST00000355371 LMNAP02545 664 aaKnown RBP17.38■□□□□ 0.37
SHTN1-202ENST00000355371 HMGCS2P54868 508 aa17.38■□□□□ 0.37
SHTN1-202ENST00000355371 SNRPFP62306 86 aaKnown RBP17.38■□□□□ 0.37
SHTN1-202ENST00000355371 CCZ1BP86790 482 aa17.38■□□□□ 0.37
SHTN1-202ENST00000355371 CCZ1P86791 482 aaPredicted RBP17.38■□□□□ 0.37
SHTN1-202ENST00000355371 FSCBQ5H9T9 825 aa17.38■□□□□ 0.37
SHTN1-202ENST00000355371 EFHC2Q5JST6 749 aa17.38■□□□□ 0.37
SHTN1-202ENST00000355371 EP400NLQ6ZTU2 488 aa17.38■□□□□ 0.37
SHTN1-202ENST00000355371 TRAIPQ9BWF2 469 aa17.38■□□□□ 0.37
SHTN1-202ENST00000355371 UVRAGQ9P2Y5 699 aa17.38■□□□□ 0.37
SHTN1-202ENST00000355371 PCSK1NQ9UHG2 260 aa17.38■□□□□ 0.37
SHTN1-202ENST00000355371 NRXN1Q9ULB1 1477 aa17.38■□□□□ 0.37
SHTN1-202ENST00000355371 GPS1Q13098 491 aa17.38■□□□□ 0.37
SHTN1-202ENST00000355371 ATP11CQ8NB49 1132 aa17.38■□□□□ 0.37
SHTN1-202ENST00000355371 ATP6V1G3Q96LB4 118 aa17.38■□□□□ 0.37
SHTN1-202ENST00000355371 ACAP3Q96P50 834 aa17.38■□□□□ 0.37
SHTN1-202ENST00000355371 FXR2P51116 673 aaKnown RBP eCLIP17.38■□□□□ 0.376e-6■■■■□ 25.8
SHTN1-202ENST00000355371 CYFIP1Q7L576 1253 aa17.38■□□□□ 0.37
SHTN1-202ENST00000355371 RNPC3Q96LT9 517 aaKnown RBP17.38■□□□□ 0.37
SHTN1-202ENST00000355371 ADAMTS13Q76LX8 1427 aa17.37■□□□□ 0.37
SHTN1-202ENST00000355371 GMNCA6NCL1 334 aa17.37■□□□□ 0.37
SHTN1-202ENST00000355371 SPECC1L-ADORA2AF8WAN1 911 aa17.37■□□□□ 0.37
SHTN1-202ENST00000355371 NVLO15381 856 aaKnown RBP17.37■□□□□ 0.37
SHTN1-202ENST00000355371 MTF1Q14872 753 aa17.37■□□□□ 0.37
SHTN1-202ENST00000355371 FAM102AQ5T9C2 384 aaPredicted RBP17.37■□□□□ 0.37
SHTN1-202ENST00000355371 GSPT2Q8IYD1 628 aaKnown RBP17.37■□□□□ 0.37
SHTN1-202ENST00000355371 WDR24Q96S15 920 aa17.37■□□□□ 0.37
SHTN1-202ENST00000355371 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.37■□□□□ 0.37
SHTN1-202ENST00000355371 APOBEC2Q9Y235 224 aaKnown RBP17.37■□□□□ 0.37
SHTN1-202ENST00000355371 A0A1W2PQJ5 194 aa17.37■□□□□ 0.37
SHTN1-202ENST00000355371 MGEA5O60502 916 aa17.37■□□□□ 0.37
SHTN1-202ENST00000355371 PRKCBP05771 671 aa17.37■□□□□ 0.37
SHTN1-202ENST00000355371 MXD4Q14582 209 aaPredicted RBP17.37■□□□□ 0.37
SHTN1-202ENST00000355371 CNPY4Q8N129 248 aa17.37■□□□□ 0.37
SHTN1-202ENST00000355371 COG1Q8WTW3 980 aa17.37■□□□□ 0.37
SHTN1-202ENST00000355371 TRIM15Q9C019 465 aa17.37■□□□□ 0.37
SHTN1-202ENST00000355371 PRR12Q9ULL5 1215 aa17.37■□□□□ 0.37
SHTN1-202ENST00000355371 GPR75-ASB3A0A0A6YYF3 556 aa17.37■□□□□ 0.37
SHTN1-202ENST00000355371 MYMKA6NI61 221 aa17.37■□□□□ 0.37
SHTN1-202ENST00000355371 A8MXQ7 604 aa17.37■□□□□ 0.37
SHTN1-202ENST00000355371 H3BRJ5 948 aa17.37■□□□□ 0.37
SHTN1-202ENST00000355371 EIF3DO15371 548 aaKnown RBP eCLIP17.37■□□□□ 0.37
SHTN1-202ENST00000355371 FMO5P49326 533 aa17.37■□□□□ 0.37
SHTN1-202ENST00000355371 MARCH10Q8NA82 808 aaPredicted RBP17.37■□□□□ 0.37
SHTN1-202ENST00000355371 FAM151AQ8WW52 585 aa17.37■□□□□ 0.37
SHTN1-202ENST00000355371 VCPKMTQ9H867 229 aa17.37■□□□□ 0.37
SHTN1-202ENST00000355371 INPP5FQ9Y2H2 1132 aa17.37■□□□□ 0.37
SHTN1-202ENST00000355371 FNDC3AQ9Y2H6 1198 aaKnown RBP17.37■□□□□ 0.37
SHTN1-202ENST00000355371 A0A0G2JND7 137 aa17.37■□□□□ 0.37
SHTN1-202ENST00000355371 ESYT3A0FGR9 886 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms