RNA–Protein interactions for RNA: ENST00000355301.8

NPHP1-202, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 1,932 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-202ENST00000355301 ENPEPQ07075 957 aa10.48□□□□□ -0.73
NPHP1-202ENST00000355301 HSP90AA2PQ14568 343 aaPredicted RBP10.48□□□□□ -0.73
NPHP1-202ENST00000355301 ARID5BQ14865 1188 aa10.48□□□□□ -0.73
NPHP1-202ENST00000355301 DCAF17Q5H9S7 520 aaPredicted RBP10.48□□□□□ -0.73
NPHP1-202ENST00000355301 FIGNQ5HY92 759 aa10.48□□□□□ -0.73
NPHP1-202ENST00000355301 TCERG1LQ5VWI1 586 aa10.48□□□□□ -0.73
NPHP1-202ENST00000355301 TAF2Q6P1X5 1199 aa10.48□□□□□ -0.73
NPHP1-202ENST00000355301 RUFY4Q6ZNE9 571 aa10.48□□□□□ -0.73
NPHP1-202ENST00000355301 CBWD2Q8IUF1 395 aa10.48□□□□□ -0.73
NPHP1-202ENST00000355301 ZNF710Q8N1W2 664 aa10.48□□□□□ -0.73
NPHP1-202ENST00000355301 GPD1LQ8N335 351 aa10.48□□□□□ -0.73
NPHP1-202ENST00000355301 NLRP7Q8WX94 980 aa10.48□□□□□ -0.73
NPHP1-202ENST00000355301 SAAL1Q96ER3 474 aa10.48□□□□□ -0.73
NPHP1-202ENST00000355301 ZNF668Q96K58 619 aaPredicted RBP10.48□□□□□ -0.73
NPHP1-202ENST00000355301 NUP58Q9BVL2 599 aa10.48□□□□□ -0.73
NPHP1-202ENST00000355301 HAPLN2Q9GZV7 340 aa10.48□□□□□ -0.73
NPHP1-202ENST00000355301 FAM49AQ9H0Q0 323 aaPredicted RBP10.48□□□□□ -0.73
NPHP1-202ENST00000355301 ADAMTS10Q9H324 1103 aa10.48□□□□□ -0.73
NPHP1-202ENST00000355301 KCNF1Q9H3M0 494 aa10.48□□□□□ -0.73
NPHP1-202ENST00000355301 AGO2Q9UKV8 859 aaKnown RBP10.48□□□□□ -0.73
NPHP1-202ENST00000355301 GTPBP10A4D1E9 387 aaKnown RBP10.47□□□□□ -0.73
NPHP1-202ENST00000355301 MOXD2PA6NHM9 499 aa10.47□□□□□ -0.73
NPHP1-202ENST00000355301 ABLIM1O14639 778 aa10.47□□□□□ -0.73
NPHP1-202ENST00000355301 CLDN3O15551 220 aa10.47□□□□□ -0.73
NPHP1-202ENST00000355301 EXTL3O43909 919 aa10.47□□□□□ -0.73
NPHP1-202ENST00000355301 GPR32O75388 356 aa10.47□□□□□ -0.73
NPHP1-202ENST00000355301 CABYRO75952 493 aa10.47□□□□□ -0.73
NPHP1-202ENST00000355301 LDHAP00338 332 aaKnown RBP10.47□□□□□ -0.73
NPHP1-202ENST00000355301 ADRB2P07550 413 aa10.47□□□□□ -0.73
NPHP1-202ENST00000355301 KRT13P13646 458 aa10.47□□□□□ -0.73
NPHP1-202ENST00000355301 PROZP22891 400 aa10.47□□□□□ -0.73
NPHP1-202ENST00000355301 ZNF200P98182 395 aaPredicted RBP10.47□□□□□ -0.73
NPHP1-202ENST00000355301 RBL2Q08999 1139 aa10.47□□□□□ -0.73
NPHP1-202ENST00000355301 PRPF4BQ13523 1007 aaKnown RBP10.47□□□□□ -0.73
NPHP1-202ENST00000355301 TRIP12Q14669 1992 aaPredicted RBP10.47□□□□□ -0.73
NPHP1-202ENST00000355301 AMHR2Q16671 573 aa10.47□□□□□ -0.73
NPHP1-202ENST00000355301 SRGAP1Q7Z6B7 1085 aa10.47□□□□□ -0.73
NPHP1-202ENST00000355301 PPFIBP1Q86W92 1011 aa10.47□□□□□ -0.73
NPHP1-202ENST00000355301 NME8Q8N427 588 aa10.47□□□□□ -0.73
NPHP1-202ENST00000355301 CCDC155Q8N6L0 562 aa10.47□□□□□ -0.73
NPHP1-202ENST00000355301 TC2NQ8N9U0 490 aa10.47□□□□□ -0.73
NPHP1-202ENST00000355301 IQCDQ96DY2 449 aa10.47□□□□□ -0.73
NPHP1-202ENST00000355301 ZBTB45Q96K62 511 aaPredicted RBP10.47□□□□□ -0.73
NPHP1-202ENST00000355301 MFSD14AQ96MC6 490 aa10.47□□□□□ -0.73
NPHP1-202ENST00000355301 ZNF830Q96NB3 372 aaPredicted RBP10.47□□□□□ -0.73
NPHP1-202ENST00000355301 TSEN34Q9BSV6 310 aaKnown RBP10.47□□□□□ -0.73
NPHP1-202ENST00000355301 TTYH3Q9C0H2 523 aa10.47□□□□□ -0.73
NPHP1-202ENST00000355301 PTPRHQ9HD43 1115 aa10.47□□□□□ -0.73
NPHP1-202ENST00000355301 ANKFY1Q9P2R3 1169 aa10.47□□□□□ -0.73
NPHP1-202ENST00000355301 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.47□□□□□ -0.73
NPHP1-202ENST00000355301 GRIN2DO15399 1336 aa10.47□□□□□ -0.73
NPHP1-202ENST00000355301 CNTNAP2Q9UHC6 1331 aa10.47□□□□□ -0.73
NPHP1-202ENST00000355301 GOLGA8IPA6NC78 632 aa10.46□□□□□ -0.73
NPHP1-202ENST00000355301 GOLGA8JA6NMD2 632 aa10.46□□□□□ -0.73
NPHP1-202ENST00000355301 MYCNP04198 464 aaPredicted RBP10.46□□□□□ -0.73
NPHP1-202ENST00000355301 TPM1P09493 284 aa10.46□□□□□ -0.73
NPHP1-202ENST00000355301 CASP14P31944 242 aa10.46□□□□□ -0.73
NPHP1-202ENST00000355301 VAMP7P51809 220 aa10.46□□□□□ -0.73
NPHP1-202ENST00000355301 ACLYP53396 1101 aa10.46□□□□□ -0.73
NPHP1-202ENST00000355301 MCL1Q07820 350 aa10.46□□□□□ -0.73
NPHP1-202ENST00000355301 KCNMA1Q12791 1236 aa10.46□□□□□ -0.73
NPHP1-202ENST00000355301 PCBP1Q15365 356 aaKnown RBP eCLIP10.46□□□□□ -0.73
NPHP1-202ENST00000355301 KIZQ2M2Z5 673 aa10.46□□□□□ -0.73
NPHP1-202ENST00000355301 ATF7IP2Q5U623 682 aa10.46□□□□□ -0.73
NPHP1-202ENST00000355301 CNGA4Q8IV77 575 aa10.46□□□□□ -0.73
NPHP1-202ENST00000355301 SH3TC2Q8TF17 1288 aa10.46□□□□□ -0.73
NPHP1-202ENST00000355301 DNAJB3Q8WWF6 145 aa10.46□□□□□ -0.73
NPHP1-202ENST00000355301 PPP1R16BQ96T49 567 aa10.46□□□□□ -0.73
NPHP1-202ENST00000355301 FAM213AQ9BRX8 229 aa10.46□□□□□ -0.73
NPHP1-202ENST00000355301 MSTO1Q9BUK6 570 aa10.46□□□□□ -0.73
NPHP1-202ENST00000355301 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.46□□□□□ -0.73
NPHP1-202ENST00000355301 TNFSF13BQ9Y275 285 aa10.46□□□□□ -0.73
NPHP1-202ENST00000355301 ZNF233A6NK53 670 aa10.46□□□□□ -0.74
NPHP1-202ENST00000355301 AKR1B15C9JRZ8 316 aaPredicted RBP10.46□□□□□ -0.74
NPHP1-202ENST00000355301 B4GALT5O43286 388 aa10.46□□□□□ -0.74
NPHP1-202ENST00000355301 FAM189A1O60320 539 aa10.46□□□□□ -0.74
NPHP1-202ENST00000355301 MFAP3LO75121 409 aa10.46□□□□□ -0.74
NPHP1-202ENST00000355301 CSDE1O75534 798 aaKnown RBP10.46□□□□□ -0.74
NPHP1-202ENST00000355301 RPLP2P05387 115 aaKnown RBP10.46□□□□□ -0.74
NPHP1-202ENST00000355301 TRIM49P0CI25 452 aa10.46□□□□□ -0.74
NPHP1-202ENST00000355301 TRIM49CP0CI26 452 aa10.46□□□□□ -0.74
NPHP1-202ENST00000355301 TRIM21P19474 475 aaKnown RBP10.46□□□□□ -0.74
NPHP1-202ENST00000355301 FMO5P49326 533 aa10.46□□□□□ -0.74
NPHP1-202ENST00000355301 KLK7P49862 253 aa10.46□□□□□ -0.74
NPHP1-202ENST00000355301 FXR1P51114 621 aaKnown RBP eCLIP10.46□□□□□ -0.74
NPHP1-202ENST00000355301 CYP24A1Q07973 514 aa10.46□□□□□ -0.74
NPHP1-202ENST00000355301 LRMPQ12912 555 aa10.46□□□□□ -0.74
NPHP1-202ENST00000355301 GDF6Q6KF10 455 aaPredicted RBP10.46□□□□□ -0.74
NPHP1-202ENST00000355301 MPZL3Q6UWV2 235 aa10.46□□□□□ -0.74
NPHP1-202ENST00000355301 CRELD2Q6UXH1 353 aaPredicted RBP10.46□□□□□ -0.74
NPHP1-202ENST00000355301 USP37Q86T82 979 aa10.46□□□□□ -0.74
NPHP1-202ENST00000355301 PLEKHO2Q8TD55 490 aa10.46□□□□□ -0.74
NPHP1-202ENST00000355301 TMC2Q8TDI7 906 aa10.46□□□□□ -0.74
NPHP1-202ENST00000355301 PARD3BQ8TEW8 1205 aa10.46□□□□□ -0.74
NPHP1-202ENST00000355301 SCLT1Q96NL6 688 aa10.46□□□□□ -0.74
NPHP1-202ENST00000355301 GCOM2Q9BZD3 368 aaPredicted RBP10.46□□□□□ -0.74
NPHP1-202ENST00000355301 CAPN11Q9UMQ6 739 aa10.46□□□□□ -0.74
NPHP1-202ENST00000355301 ZKSCAN5Q9Y2L8 839 aa10.46□□□□□ -0.74
NPHP1-202ENST00000355301 A0A1W2PQJ5 194 aa10.45□□□□□ -0.74
NPHP1-202ENST00000355301 TTC26A0AVF1 554 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms