RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 LACTB2Q53H82 288 aaPredicted RBP11.64□□□□□ -0.55
SND1-201ENST00000354725 HIBCHQ6NVY1 386 aaPredicted RBP11.64□□□□□ -0.55
SND1-201ENST00000354725 LRRC55Q6ZSA7 311 aa11.64□□□□□ -0.55
SND1-201ENST00000354725 MYCBPAPQ8TBZ2 947 aa11.64□□□□□ -0.55
SND1-201ENST00000354725 DDX4Q9NQI0 724 aaKnown RBP11.64□□□□□ -0.55
SND1-201ENST00000354725 FAM184BQ9ULE4 1060 aa11.64□□□□□ -0.55
SND1-201ENST00000354725 EPHB6O15197 1021 aa11.63□□□□□ -0.55
SND1-201ENST00000354725 ZNF185O15231 689 aa11.63□□□□□ -0.55
SND1-201ENST00000354725 CCDC166P0CW27 439 aa11.63□□□□□ -0.55
SND1-201ENST00000354725 TUBP50607 506 aa11.63□□□□□ -0.55
SND1-201ENST00000354725 HGSNATQ68CP4 663 aa11.63□□□□□ -0.55
SND1-201ENST00000354725 NLRP14Q86W24 1093 aa11.63□□□□□ -0.55
SND1-201ENST00000354725 RASGRP4Q8TDF6 673 aa11.63□□□□□ -0.55
SND1-201ENST00000354725 EDEM3Q9BZQ6 932 aa11.63□□□□□ -0.55
SND1-201ENST00000354725 BLOC1S4Q9NUP1 217 aa11.63□□□□□ -0.55
SND1-201ENST00000354725 CAPN6Q9Y6Q1 641 aa11.63□□□□□ -0.55
SND1-201ENST00000354725 ATP9BO43861 1147 aa11.63□□□□□ -0.55
SND1-201ENST00000354725 PLOD1Q02809 727 aaPredicted RBP11.63□□□□□ -0.55
SND1-201ENST00000354725 KRT72Q14CN4 511 aa11.63□□□□□ -0.55
SND1-201ENST00000354725 MAP7D1Q3KQU3 841 aa11.63□□□□□ -0.55
SND1-201ENST00000354725 ZCWPW2Q504Y3 356 aa11.63□□□□□ -0.55
SND1-201ENST00000354725 CSGALNACT2Q8N6G5 542 aa11.63□□□□□ -0.55
SND1-201ENST00000354725 SMC1BQ8NDV3 1235 aa11.63□□□□□ -0.55
SND1-201ENST00000354725 AGAP11Q8TF27 550 aa11.63□□□□□ -0.55
SND1-201ENST00000354725 NACC2Q96BF6 587 aa11.63□□□□□ -0.55
SND1-201ENST00000354725 DMAP1Q9NPF5 467 aaPredicted RBP11.63□□□□□ -0.55
SND1-201ENST00000354725 MAFFQ9ULX9 164 aa11.63□□□□□ -0.55
SND1-201ENST00000354725 RASA4O43374 803 aa11.63□□□□□ -0.55
SND1-201ENST00000354725 FOSP01100 380 aaPredicted RBP11.63□□□□□ -0.55
SND1-201ENST00000354725 FXR2P51116 673 aaKnown RBP eCLIP11.63□□□□□ -0.551e-8■■■■■ 29.6
SND1-201ENST00000354725 PSMD7P51665 324 aa11.63□□□□□ -0.55
SND1-201ENST00000354725 SNX16P57768 344 aa11.63□□□□□ -0.55
SND1-201ENST00000354725 ANKRD13BQ86YJ7 626 aa11.63□□□□□ -0.55
SND1-201ENST00000354725 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.63□□□□□ -0.551e-40■■■■■ 58.1
SND1-201ENST00000354725 SH3KBP1Q96B97 665 aa11.63□□□□□ -0.55
SND1-201ENST00000354725 HPS4Q9NQG7 708 aa11.63□□□□□ -0.55
SND1-201ENST00000354725 ABCF3Q9NUQ8 709 aa11.63□□□□□ -0.55
SND1-201ENST00000354725 LOC285556D6RIA3 1793 aa11.63□□□□□ -0.55
SND1-201ENST00000354725 EVI5O60447 810 aa11.62□□□□□ -0.55
SND1-201ENST00000354725 MRPS35P82673 323 aaKnown RBP11.62□□□□□ -0.55
SND1-201ENST00000354725 NNTQ13423 1086 aa11.62□□□□□ -0.55
SND1-201ENST00000354725 SIM2Q14190 667 aaPredicted RBP11.62□□□□□ -0.55
SND1-201ENST00000354725 PTGISQ16647 500 aa11.62□□□□□ -0.55
SND1-201ENST00000354725 SGSM1Q2NKQ1 1148 aa11.62□□□□□ -0.55
SND1-201ENST00000354725 EXOC3L1Q86VI1 746 aa11.62□□□□□ -0.55
SND1-201ENST00000354725 TRIM47Q96LD4 638 aa11.62□□□□□ -0.55
SND1-201ENST00000354725 GDAP1L1Q96MZ0 367 aa11.62□□□□□ -0.55
SND1-201ENST00000354725 PVALEFA0A1B0GWK0 134 aa11.62□□□□□ -0.55
SND1-201ENST00000354725 TOMM70O94826 608 aa11.62□□□□□ -0.55
SND1-201ENST00000354725 FAM107AO95990 144 aa11.62□□□□□ -0.55
SND1-201ENST00000354725 PLEKP08567 350 aaPredicted RBP11.62□□□□□ -0.55
SND1-201ENST00000354725 OR52Z1P0C646 297 aa11.62□□□□□ -0.55
SND1-201ENST00000354725 ZBTB48P10074 688 aaPredicted RBP11.62□□□□□ -0.55
SND1-201ENST00000354725 C10orf76Q5T2E6 689 aa11.62□□□□□ -0.55
SND1-201ENST00000354725 DLK2Q6UY11 383 aa11.62□□□□□ -0.55
SND1-201ENST00000354725 FAM83AQ86UY5 434 aa11.62□□□□□ -0.55
SND1-201ENST00000354725 ZFPM1Q8IX07 1006 aa11.62□□□□□ -0.55
SND1-201ENST00000354725 SH3RF3Q8TEJ3 882 aaPredicted RBP11.62□□□□□ -0.55
SND1-201ENST00000354725 TANGO6Q9C0B7 1094 aa11.62□□□□□ -0.55
SND1-201ENST00000354725 LUC7LQ9NQ29 371 aaKnown RBP11.62□□□□□ -0.55
SND1-201ENST00000354725 ZMAT5Q9UDW3 170 aaKnown RBP11.62□□□□□ -0.55
SND1-201ENST00000354725 SALL4Q9UJQ4 1053 aa11.62□□□□□ -0.55
SND1-201ENST00000354725 TMED5Q9Y3A6 229 aa11.62□□□□□ -0.55
SND1-201ENST00000354725 MAGED1Q9Y5V3 778 aaPredicted RBP11.62□□□□□ -0.55
SND1-201ENST00000354725 SCINQ9Y6U3 715 aa11.62□□□□□ -0.55
SND1-201ENST00000354725 ATP8B3O60423 1300 aa11.62□□□□□ -0.55
SND1-201ENST00000354725 P4HA2O15460 535 aa11.62□□□□□ -0.55
SND1-201ENST00000354725 HSPA1AP0DMV8 641 aaKnown RBP11.62□□□□□ -0.55
SND1-201ENST00000354725 HSPA1BP0DMV9 641 aaKnown RBP11.62□□□□□ -0.55
SND1-201ENST00000354725 FCER1AP12319 257 aa11.62□□□□□ -0.55
SND1-201ENST00000354725 BTDP43251 543 aa11.62□□□□□ -0.55
SND1-201ENST00000354725 MARSP56192 900 aaKnown RBP11.62□□□□□ -0.55
SND1-201ENST00000354725 GSTO1P78417 241 aa11.62□□□□□ -0.55
SND1-201ENST00000354725 FSTL1Q12841 308 aa11.62□□□□□ -0.55
SND1-201ENST00000354725 NFIAQ12857 509 aa11.62□□□□□ -0.55
SND1-201ENST00000354725 GRB10Q13322 594 aa11.62□□□□□ -0.55
SND1-201ENST00000354725 VWA3BQ502W6 1294 aa11.62□□□□□ -0.55
SND1-201ENST00000354725 HAUS3Q68CZ6 603 aa11.62□□□□□ -0.55
SND1-201ENST00000354725 THOC7Q6I9Y2 204 aaKnown RBP11.62□□□□□ -0.55
SND1-201ENST00000354725 PPP4R4Q6NUP7 873 aa11.62□□□□□ -0.55
SND1-201ENST00000354725 DPY19L2P1Q6NXN4 242 aa11.62□□□□□ -0.55
SND1-201ENST00000354725 CABP7Q86V35 215 aa11.62□□□□□ -0.55
SND1-201ENST00000354725 SYN2Q92777 582 aaPredicted RBP11.62□□□□□ -0.55
SND1-201ENST00000354725 HVCN1Q96D96 273 aa11.62□□□□□ -0.55
SND1-201ENST00000354725 PNMA5Q96PV4 448 aa11.62□□□□□ -0.55
SND1-201ENST00000354725 LNPEPQ9UIQ6 1025 aa11.62□□□□□ -0.55
SND1-201ENST00000354725 MRPL42Q9Y6G3 142 aaKnown RBP11.62□□□□□ -0.55
SND1-201ENST00000354725 PARP14Q460N5 1801 aa11.61□□□□□ -0.55
SND1-201ENST00000354725 SSU72P8A0A1W2PR75 194 aa11.61□□□□□ -0.55
SND1-201ENST00000354725 TMEM247A6NEH6 219 aa11.61□□□□□ -0.55
SND1-201ENST00000354725 SUPT3HO75486 399 aa11.61□□□□□ -0.55
SND1-201ENST00000354725 MYBP10242 640 aa11.61□□□□□ -0.55
SND1-201ENST00000354725 BCRP11274 1271 aa11.61□□□□□ -0.55
SND1-201ENST00000354725 IDO1P14902 403 aa11.61□□□□□ -0.55
SND1-201ENST00000354725 RASA1P20936 1047 aa11.61□□□□□ -0.55
SND1-201ENST00000354725 PPP1R7Q15435 360 aa11.61□□□□□ -0.55
SND1-201ENST00000354725 TMEM119Q4V9L6 283 aa11.61□□□□□ -0.55
SND1-201ENST00000354725 ANGEL2Q5VTE6 544 aaKnown RBP11.61□□□□□ -0.55
SND1-201ENST00000354725 CST9Q5W186 159 aa11.61□□□□□ -0.55
SND1-201ENST00000354725 ANO7Q6IWH7 933 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms