RNA–Protein interactions for RNA: ENST00000354500.6

TRPM3-201, Transcript of transient receptor potential cation channel subfamily M member 3, humanhuman

TSL 1 (best)

Gene TRPM3, Length 4,459 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM3-201ENST00000354500 ORC2Q13416 577 aaPredicted RBP13.04□□□□□ -0.32
TRPM3-201ENST00000354500 EP400NLQ6ZTU2 488 aa13.04□□□□□ -0.32
TRPM3-201ENST00000354500 ZC3H18Q86VM9 953 aaKnown RBP13.04□□□□□ -0.32
TRPM3-201ENST00000354500 TMEM35BQ8NCS4 154 aa13.04□□□□□ -0.32
TRPM3-201ENST00000354500 MTMR8Q96EF0 704 aa13.04□□□□□ -0.32
TRPM3-201ENST00000354500 SEL1LQ9UBV2 794 aa13.04□□□□□ -0.32
TRPM3-201ENST00000354500 ODF2LQ9ULJ1 636 aa13.04□□□□□ -0.32
TRPM3-201ENST00000354500 CPP00450 1065 aa13.04□□□□□ -0.32
TRPM3-201ENST00000354500 SLC4A1P02730 911 aa13.04□□□□□ -0.32
TRPM3-201ENST00000354500 JAK3P52333 1124 aa13.04□□□□□ -0.32
TRPM3-201ENST00000354500 SARNPP82979 210 aaKnown RBP13.04□□□□□ -0.32
TRPM3-201ENST00000354500 RINT1Q6NUQ1 792 aa13.04□□□□□ -0.32
TRPM3-201ENST00000354500 MAML1Q92585 1016 aa13.04□□□□□ -0.32
TRPM3-201ENST00000354500 CNOT10Q9H9A5 744 aaKnown RBP13.04□□□□□ -0.32
TRPM3-201ENST00000354500 NAGPAQ9UK23 515 aa13.04□□□□□ -0.32
TRPM3-201ENST00000354500 AGO2Q9UKV8 859 aaKnown RBP13.04□□□□□ -0.32
TRPM3-201ENST00000354500 USP20Q9Y2K6 914 aa13.04□□□□□ -0.32
TRPM3-201ENST00000354500 TARSL2A2RTX5 802 aaKnown RBP13.04□□□□□ -0.32
TRPM3-201ENST00000354500 FOXN3O00409 490 aaPredicted RBP13.04□□□□□ -0.32
TRPM3-201ENST00000354500 GYS1P13807 737 aa13.04□□□□□ -0.32
TRPM3-201ENST00000354500 NAB2Q15742 525 aa13.04□□□□□ -0.32
TRPM3-201ENST00000354500 LONRF1Q17RB8 773 aa13.04□□□□□ -0.32
TRPM3-201ENST00000354500 ZNF699Q32M78 642 aa13.04□□□□□ -0.32
TRPM3-201ENST00000354500 TRAPPC11Q7Z392 1133 aa13.04□□□□□ -0.32
TRPM3-201ENST00000354500 SRLQ86TD4 932 aa13.04□□□□□ -0.32
TRPM3-201ENST00000354500 SLC38A10Q9HBR0 1119 aa13.04□□□□□ -0.32
TRPM3-201ENST00000354500 OSGEPQ9NPF4 335 aa13.04□□□□□ -0.32
TRPM3-201ENST00000354500 POLRMTO00411 1230 aaKnown RBP13.03□□□□□ -0.32
TRPM3-201ENST00000354500 AKAP3O75969 853 aa13.03□□□□□ -0.32
TRPM3-201ENST00000354500 ZBED1O96006 694 aa13.03□□□□□ -0.32
TRPM3-201ENST00000354500 ARP10275 920 aa13.03□□□□□ -0.32
TRPM3-201ENST00000354500 COMTP21964 271 aa13.03□□□□□ -0.32
TRPM3-201ENST00000354500 KIF22Q14807 665 aa13.03□□□□□ -0.32
TRPM3-201ENST00000354500 ARHGAP24Q8N264 748 aa13.03□□□□□ -0.32
TRPM3-201ENST00000354500 SLC17A8Q8NDX2 589 aa13.03□□□□□ -0.32
TRPM3-201ENST00000354500 PPP4R1Q8TF05 950 aa13.03□□□□□ -0.32
TRPM3-201ENST00000354500 ACSF2Q96CM8 615 aaPredicted RBP13.03□□□□□ -0.32
TRPM3-201ENST00000354500 STK33Q9BYT3 514 aa13.03□□□□□ -0.32
TRPM3-201ENST00000354500 MIS12Q9H081 205 aa13.03□□□□□ -0.32
TRPM3-201ENST00000354500 ZNRF3Q9ULT6 936 aa13.03□□□□□ -0.32
TRPM3-201ENST00000354500 KRT17Q04695 432 aa13.03□□□□□ -0.32
TRPM3-201ENST00000354500 SNRNP35Q16560 246 aaKnown RBP13.03□□□□□ -0.32
TRPM3-201ENST00000354500 CENPPQ6IPU0 288 aa13.03□□□□□ -0.32
TRPM3-201ENST00000354500 RAPH1Q70E73 1250 aa13.03□□□□□ -0.32
TRPM3-201ENST00000354500 ANKMY2Q8IV38 441 aa13.03□□□□□ -0.32
TRPM3-201ENST00000354500 ZFPM1Q8IX07 1006 aa13.03□□□□□ -0.32
TRPM3-201ENST00000354500 ZBED8Q8IZ13 594 aa13.03□□□□□ -0.32
TRPM3-201ENST00000354500 PDCD7Q8N8D1 485 aaKnown RBP13.03□□□□□ -0.32
TRPM3-201ENST00000354500 CCT8L2Q96SF2 557 aa13.03□□□□□ -0.32
TRPM3-201ENST00000354500 DNAJC7Q99615 494 aa13.03□□□□□ -0.32
TRPM3-201ENST00000354500 DUSP9Q99956 384 aaKnown RBP13.03□□□□□ -0.32
TRPM3-201ENST00000354500 THAP2Q9H0W7 228 aa13.03□□□□□ -0.32
TRPM3-201ENST00000354500 ANKZF1Q9H8Y5 726 aa13.03□□□□□ -0.32
TRPM3-201ENST00000354500 DDX4Q9NQI0 724 aaKnown RBP13.03□□□□□ -0.32
TRPM3-201ENST00000354500 KCNH7Q9NS40 1196 aa13.03□□□□□ -0.32
TRPM3-201ENST00000354500 HERC5Q9UII4 1024 aaKnown RBP13.03□□□□□ -0.32
TRPM3-201ENST00000354500 ITSN1Q15811 1721 aa13.03□□□□□ -0.32
TRPM3-201ENST00000354500 DPEP1P16444 411 aa13.03□□□□□ -0.32
TRPM3-201ENST00000354500 BARGINQ6ZT62 677 aa13.03□□□□□ -0.32
TRPM3-201ENST00000354500 RNF149Q8NC42 400 aa13.03□□□□□ -0.32
TRPM3-201ENST00000354500 SCFD1Q8WVM8 642 aa13.03□□□□□ -0.32
TRPM3-201ENST00000354500 SPIRE2Q8WWL2 714 aa13.03□□□□□ -0.32
TRPM3-201ENST00000354500 TMEM117Q9H0C3 514 aa13.03□□□□□ -0.32
TRPM3-201ENST00000354500 PFDN4Q9NQP4 134 aa13.03□□□□□ -0.32
TRPM3-201ENST00000354500 SPATA31A6Q5VVP1 1343 aa13.03□□□□□ -0.32
TRPM3-201ENST00000354500 SPATA31D1Q6ZQQ2 1576 aa13.03□□□□□ -0.32
TRPM3-201ENST00000354500 ALCAMQ13740 583 aa13.03□□□□□ -0.32
TRPM3-201ENST00000354500 COG2Q14746 738 aa13.03□□□□□ -0.32
TRPM3-201ENST00000354500 KIAA1755Q5JYT7 1200 aa13.03□□□□□ -0.32
TRPM3-201ENST00000354500 CENPUQ71F23 418 aa13.03□□□□□ -0.32
TRPM3-201ENST00000354500 RSRC2Q7L4I2 434 aaKnown RBP13.03□□□□□ -0.32
TRPM3-201ENST00000354500 PCGF5Q86SE9 256 aa13.03□□□□□ -0.32
TRPM3-201ENST00000354500 KCNV2Q8TDN2 545 aa13.03□□□□□ -0.32
TRPM3-201ENST00000354500 POP1Q99575 1024 aaKnown RBP13.03□□□□□ -0.32
TRPM3-201ENST00000354500 AP5M1Q9H0R1 490 aa13.03□□□□□ -0.32
TRPM3-201ENST00000354500 KITP10721 976 aa13.02□□□□□ -0.32
TRPM3-201ENST00000354500 PSMC1P62191 440 aaKnown RBP13.02□□□□□ -0.32
TRPM3-201ENST00000354500 KYNUQ16719 465 aa13.02□□□□□ -0.32
TRPM3-201ENST00000354500 EDRF1Q3B7T1 1238 aa13.02□□□□□ -0.32
TRPM3-201ENST00000354500 WDR72Q3MJ13 1102 aa13.02□□□□□ -0.32
TRPM3-201ENST00000354500 RFX8Q6ZV50 586 aa13.02□□□□□ -0.32
TRPM3-201ENST00000354500 NKX2-3Q8TAU0 364 aa13.02□□□□□ -0.32
TRPM3-201ENST00000354500 CBWD1Q9BRT8 395 aa13.02□□□□□ -0.32
TRPM3-201ENST00000354500 ZNF302Q9NR11 478 aa13.02□□□□□ -0.32
TRPM3-201ENST00000354500 PLEKHG2Q9H7P9 1386 aa13.02□□□□□ -0.32
TRPM3-201ENST00000354500 TMEM150BA6NC51 233 aa13.02□□□□□ -0.33
TRPM3-201ENST00000354500 NR3C2P08235 984 aa13.02□□□□□ -0.33
TRPM3-201ENST00000354500 GCKP35557 465 aa13.02□□□□□ -0.33
TRPM3-201ENST00000354500 SOX10P56693 466 aa13.02□□□□□ -0.33
TRPM3-201ENST00000354500 HHIPL2Q6UWX4 724 aa13.02□□□□□ -0.33
TRPM3-201ENST00000354500 COL23A1Q86Y22 540 aaPredicted RBP13.02□□□□□ -0.33
TRPM3-201ENST00000354500 CCT6BQ92526 530 aa13.02□□□□□ -0.33
TRPM3-201ENST00000354500 ZNF70Q9UC06 446 aaPredicted RBP13.02□□□□□ -0.33
TRPM3-201ENST00000354500 TJP3O95049 919 aa13.02□□□□□ -0.33
TRPM3-201ENST00000354500 CHRNA3P32297 505 aa13.02□□□□□ -0.33
TRPM3-201ENST00000354500 TPD52P55327 224 aaPredicted RBP13.02□□□□□ -0.33
TRPM3-201ENST00000354500 MDM2Q00987 491 aaPredicted RBP13.02□□□□□ -0.33
TRPM3-201ENST00000354500 PDIA2Q13087 525 aaKnown RBP13.02□□□□□ -0.33
TRPM3-201ENST00000354500 CCDC117Q8IWD4 279 aaPredicted RBP13.02□□□□□ -0.33
TRPM3-201ENST00000354500 FBXL16Q8N461 479 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms