RNA–Protein interactions for RNA: ENST00000353468.4

SIGMAR1-202, Transcript of sigma non-opioid intracellular receptor 1, humanhuman

TSL 1 (best)

Gene SIGMAR1, Length 1,582 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIGMAR1-202ENST00000353468 AKAP3O75969 853 aa21.99■■□□□ 1.11
SIGMAR1-202ENST00000353468 CAPN2P17655 700 aa21.99■■□□□ 1.11
SIGMAR1-202ENST00000353468 TRIM71Q2Q1W2 868 aaKnown RBP21.99■■□□□ 1.11
SIGMAR1-202ENST00000353468 CCDC40Q4G0X9 1142 aa21.99■■□□□ 1.11
SIGMAR1-202ENST00000353468 XXYLT1Q8NBI6 393 aa21.99■■□□□ 1.11
SIGMAR1-202ENST00000353468 TRIM5Q9C035 493 aa21.99■■□□□ 1.11
SIGMAR1-202ENST00000353468 LRRC10BA6NIK2 292 aa21.98■■□□□ 1.11
SIGMAR1-202ENST00000353468 TOM1L1O75674 476 aa21.98■■□□□ 1.11
SIGMAR1-202ENST00000353468 ERLIN2O94905 339 aa21.98■■□□□ 1.11
SIGMAR1-202ENST00000353468 CHRNA1P02708 482 aa21.98■■□□□ 1.11
SIGMAR1-202ENST00000353468 EPB41P11171 864 aaKnown RBP21.98■■□□□ 1.11
SIGMAR1-202ENST00000353468 FGFR4P22455 802 aa21.98■■□□□ 1.11
SIGMAR1-202ENST00000353468 PSMC2P35998 433 aaKnown RBP21.98■■□□□ 1.11
SIGMAR1-202ENST00000353468 MARSP56192 900 aaKnown RBP21.98■■□□□ 1.11
SIGMAR1-202ENST00000353468 MGAT3Q09327 533 aa21.98■■□□□ 1.11
SIGMAR1-202ENST00000353468 KRT31Q15323 416 aa21.98■■□□□ 1.11
SIGMAR1-202ENST00000353468 PCBP1Q15365 356 aaKnown RBP eCLIP21.98■■□□□ 1.119e-9■■■■■ 27.3
SIGMAR1-202ENST00000353468 TMEM132AQ24JP5 1023 aa21.98■■□□□ 1.11
SIGMAR1-202ENST00000353468 SLC39A5Q6ZMH5 540 aa21.98■■□□□ 1.11
SIGMAR1-202ENST00000353468 TSHZ1Q6ZSZ6 1077 aa21.98■■□□□ 1.11
SIGMAR1-202ENST00000353468 APTXQ7Z2E3 356 aaKnown RBP21.98■■□□□ 1.11
SIGMAR1-202ENST00000353468 FAM126BQ8IXS8 530 aa21.98■■□□□ 1.11
SIGMAR1-202ENST00000353468 TMEM40Q8WWA1 233 aa21.98■■□□□ 1.11
SIGMAR1-202ENST00000353468 MKNK1Q9BUB5 465 aa21.98■■□□□ 1.11
SIGMAR1-202ENST00000353468 FRMD4BQ9Y2L6 1034 aa21.98■■□□□ 1.11
SIGMAR1-202ENST00000353468 SLC16A3O15427 465 aaKnown RBP21.97■■□□□ 1.11
SIGMAR1-202ENST00000353468 CLDN3O15551 220 aa21.97■■□□□ 1.11
SIGMAR1-202ENST00000353468 CTSHP09668 335 aa21.97■■□□□ 1.11
SIGMAR1-202ENST00000353468 COL6A1P12109 1028 aa21.97■■□□□ 1.11
SIGMAR1-202ENST00000353468 MATR3P43243 847 aaKnown RBP eCLIP21.97■■□□□ 1.11
SIGMAR1-202ENST00000353468 MTIF2P46199 727 aaKnown RBP21.97■■□□□ 1.11
SIGMAR1-202ENST00000353468 ATN1P54259 1190 aaPredicted RBP21.97■■□□□ 1.11
SIGMAR1-202ENST00000353468 UBASH3AP57075 661 aa21.97■■□□□ 1.11
SIGMAR1-202ENST00000353468 ATF7IP2Q5U623 682 aa21.97■■□□□ 1.11
SIGMAR1-202ENST00000353468 CATSPER4Q7RTX7 472 aa21.97■■□□□ 1.11
SIGMAR1-202ENST00000353468 DIS3LQ8TF46 1054 aaKnown RBP21.97■■□□□ 1.11
SIGMAR1-202ENST00000353468 IFNKQ9P0W0 207 aa21.97■■□□□ 1.11
SIGMAR1-202ENST00000353468 TNFSF13BQ9Y275 285 aa21.97■■□□□ 1.11
SIGMAR1-202ENST00000353468 MROH7Q68CQ1 1323 aa21.97■■□□□ 1.11
SIGMAR1-202ENST00000353468 CNTNAP2Q9UHC6 1331 aa21.97■■□□□ 1.11
SIGMAR1-202ENST00000353468 KIAA0391O15091 583 aaKnown RBP21.96■■□□□ 1.11
SIGMAR1-202ENST00000353468 TSPAN1O60635 241 aa21.96■■□□□ 1.11
SIGMAR1-202ENST00000353468 CAND2O75155 1236 aa21.96■■□□□ 1.11
SIGMAR1-202ENST00000353468 ARF4P18085 180 aaPredicted RBP21.96■■□□□ 1.11
SIGMAR1-202ENST00000353468 SFPQP23246 707 aaKnown RBP eCLIP21.96■■□□□ 1.11
SIGMAR1-202ENST00000353468 FRMD5Q7Z6J6 570 aa21.96■■□□□ 1.11
SIGMAR1-202ENST00000353468 FAM186BQ8IYM0 893 aa21.96■■□□□ 1.11
SIGMAR1-202ENST00000353468 RDH13Q8NBN7 331 aa21.96■■□□□ 1.11
SIGMAR1-202ENST00000353468 ZSWIM2Q8NEG5 633 aa21.96■■□□□ 1.11
SIGMAR1-202ENST00000353468 ANP32BQ92688 251 aaKnown RBP21.96■■□□□ 1.11
SIGMAR1-202ENST00000353468 TUBGCP2Q9BSJ2 902 aa21.96■■□□□ 1.11
SIGMAR1-202ENST00000353468 TCHPQ9BT92 498 aa21.96■■□□□ 1.11
SIGMAR1-202ENST00000353468 HAPLN2Q9GZV7 340 aa21.96■■□□□ 1.11
SIGMAR1-202ENST00000353468 PTPRHQ9HD43 1115 aa21.96■■□□□ 1.11
SIGMAR1-202ENST00000353468 TAB2Q9NYJ8 693 aa21.96■■□□□ 1.11
SIGMAR1-202ENST00000353468 ANKFY1Q9P2R3 1169 aa21.96■■□□□ 1.11
SIGMAR1-202ENST00000353468 AGO2Q9UKV8 859 aaKnown RBP21.96■■□□□ 1.11
SIGMAR1-202ENST00000353468 DNAH12Q6ZR08 3092 aa21.96■■□□□ 1.11
SIGMAR1-202ENST00000353468 A0A0B4J269 797 aa21.95■■□□□ 1.11
SIGMAR1-202ENST00000353468 GOLGA8IPA6NC78 632 aa21.95■■□□□ 1.11
SIGMAR1-202ENST00000353468 GOLGA8JA6NMD2 632 aa21.95■■□□□ 1.11
SIGMAR1-202ENST00000353468 ADCY5O95622 1261 aa21.95■■□□□ 1.11
SIGMAR1-202ENST00000353468 CD4P01730 458 aa21.95■■□□□ 1.11
SIGMAR1-202ENST00000353468 PROZP22891 400 aa21.95■■□□□ 1.11
SIGMAR1-202ENST00000353468 COPB1P53618 953 aaKnown RBP21.95■■□□□ 1.11
SIGMAR1-202ENST00000353468 NCBP1Q09161 790 aaKnown RBP21.95■■□□□ 1.11
SIGMAR1-202ENST00000353468 FAM26DQ5JW98 314 aa21.95■■□□□ 1.11
SIGMAR1-202ENST00000353468 SAAL1Q96ER3 474 aa21.95■■□□□ 1.11
SIGMAR1-202ENST00000353468 CPB2Q96IY4 423 aa21.95■■□□□ 1.11
SIGMAR1-202ENST00000353468 FBXL18Q96ME1 805 aa21.95■■□□□ 1.11
SIGMAR1-202ENST00000353468 NAP1L5Q96NT1 182 aaPredicted RBP21.95■■□□□ 1.11
SIGMAR1-202ENST00000353468 MSTO1Q9BUK6 570 aa21.95■■□□□ 1.11
SIGMAR1-202ENST00000353468 VPS16Q9H269 839 aa21.95■■□□□ 1.11
SIGMAR1-202ENST00000353468 METTL14Q9HCE5 456 aaKnown RBP21.95■■□□□ 1.11
SIGMAR1-202ENST00000353468 ARMCX3Q9UH62 379 aaPredicted RBP21.95■■□□□ 1.11
SIGMAR1-202ENST00000353468 ABLIM1O14639 778 aa21.95■■□□□ 1.1
SIGMAR1-202ENST00000353468 CKBP12277 381 aa21.95■■□□□ 1.1
SIGMAR1-202ENST00000353468 PRKCSHP14314 528 aaPredicted RBP21.95■■□□□ 1.1
SIGMAR1-202ENST00000353468 MCL1Q07820 350 aa21.95■■□□□ 1.1
SIGMAR1-202ENST00000353468 ZNF618Q5T7W0 954 aa21.95■■□□□ 1.1
SIGMAR1-202ENST00000353468 EEF1DP3Q658K8 133 aa21.95■■□□□ 1.1
SIGMAR1-202ENST00000353468 MPZL3Q6UWV2 235 aa21.95■■□□□ 1.1
SIGMAR1-202ENST00000353468 GPD1LQ8N335 351 aa21.95■■□□□ 1.1
SIGMAR1-202ENST00000353468 BORCS6Q96GS4 357 aa21.95■■□□□ 1.1
SIGMAR1-202ENST00000353468 XPO4Q9C0E2 1151 aaKnown RBP21.95■■□□□ 1.1
SIGMAR1-202ENST00000353468 NOC2LQ9Y3T9 749 aaKnown RBP21.95■■□□□ 1.1
SIGMAR1-202ENST00000353468 A0A1B0GTH6 734 aa21.94■■□□□ 1.1
SIGMAR1-202ENST00000353468 A0A1B0GUA9 196 aa21.94■■□□□ 1.1
SIGMAR1-202ENST00000353468 MAPK13O15264 365 aa21.94■■□□□ 1.1
SIGMAR1-202ENST00000353468 TLR3O15455 904 aaKnown RBP21.94■■□□□ 1.1
SIGMAR1-202ENST00000353468 CBFA2T2O43439 604 aa21.94■■□□□ 1.1
SIGMAR1-202ENST00000353468 EXTL3O43909 919 aa21.94■■□□□ 1.1
SIGMAR1-202ENST00000353468 LDHAP00338 332 aaKnown RBP21.94■■□□□ 1.1
SIGMAR1-202ENST00000353468 TPM2P07951 284 aa21.94■■□□□ 1.1
SIGMAR1-202ENST00000353468 HOXA11P31270 313 aaPredicted RBP21.94■■□□□ 1.1
SIGMAR1-202ENST00000353468 ZNF75DP51815 510 aa21.94■■□□□ 1.1
SIGMAR1-202ENST00000353468 FILIP1LQ4L180 1135 aa21.94■■□□□ 1.1
SIGMAR1-202ENST00000353468 C1orf53Q5VUE5 145 aa21.94■■□□□ 1.1
SIGMAR1-202ENST00000353468 ANKRD33Q7Z3H0 272 aa21.94■■□□□ 1.1
SIGMAR1-202ENST00000353468 ZBTB33Q86T24 672 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms