RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 GRID2IPA4D2P6 1211 aa9.33□□□□□ -0.92
TRIM55-204ENST00000353317 A6NNZ2 444 aa9.33□□□□□ -0.92
TRIM55-204ENST00000353317 RAD51CO43502 376 aa9.33□□□□□ -0.92
TRIM55-204ENST00000353317 HIP1RO75146 1068 aa9.33□□□□□ -0.92
TRIM55-204ENST00000353317 ATG7O95352 703 aa9.33□□□□□ -0.92
TRIM55-204ENST00000353317 LYPLA2O95372 231 aa9.33□□□□□ -0.92
TRIM55-204ENST00000353317 LSP1P33241 339 aa9.33□□□□□ -0.92
TRIM55-204ENST00000353317 RAPGEF1Q13905 1077 aa9.33□□□□□ -0.92
TRIM55-204ENST00000353317 HSDL1Q3SXM5 330 aa9.33□□□□□ -0.92
TRIM55-204ENST00000353317 TUBB8Q3ZCM7 444 aa9.33□□□□□ -0.92
TRIM55-204ENST00000353317 FBXW10Q5XX13 1052 aa9.33□□□□□ -0.92
TRIM55-204ENST00000353317 RGMBQ6NW40 437 aa9.33□□□□□ -0.92
TRIM55-204ENST00000353317 MAMDC4Q6UXC1 1216 aa9.33□□□□□ -0.92
TRIM55-204ENST00000353317 KDM7AQ6ZMT4 941 aa9.33□□□□□ -0.92
TRIM55-204ENST00000353317 TRIM59Q8IWR1 403 aa9.33□□□□□ -0.92
TRIM55-204ENST00000353317 CCDC65Q8IXS2 484 aa9.33□□□□□ -0.92
TRIM55-204ENST00000353317 C4orf19Q8IY42 314 aa9.33□□□□□ -0.92
TRIM55-204ENST00000353317 SHCBP1Q8NEM2 672 aa9.33□□□□□ -0.92
TRIM55-204ENST00000353317 MAF1Q9H063 256 aa9.33□□□□□ -0.92
TRIM55-204ENST00000353317 EVPLQ92817 2033 aa9.32□□□□□ -0.92
TRIM55-204ENST00000353317 STAM2O75886 525 aa9.32□□□□□ -0.92
TRIM55-204ENST00000353317 MUTP22033 750 aa9.32□□□□□ -0.92
TRIM55-204ENST00000353317 CTGFP29279 349 aa9.32□□□□□ -0.92
TRIM55-204ENST00000353317 ZNF131P52739 623 aa9.32□□□□□ -0.92
TRIM55-204ENST00000353317 PSMC5P62195 406 aa9.32□□□□□ -0.92
TRIM55-204ENST00000353317 CAP1Q01518 475 aa9.32□□□□□ -0.92
TRIM55-204ENST00000353317 EMC10Q5UCC4 262 aa9.32□□□□□ -0.92
TRIM55-204ENST00000353317 CCDC62Q6P9F0 684 aa9.32□□□□□ -0.92
TRIM55-204ENST00000353317 MMS22LQ6ZRQ5 1243 aa9.32□□□□□ -0.92
TRIM55-204ENST00000353317 GPR142Q7Z601 462 aa9.32□□□□□ -0.92
TRIM55-204ENST00000353317 SUGP1Q8IWZ8 645 aaKnown RBP9.32□□□□□ -0.92
TRIM55-204ENST00000353317 USP38Q8NB14 1042 aa9.32□□□□□ -0.92
TRIM55-204ENST00000353317 NPLOC4Q8TAT6 608 aa9.32□□□□□ -0.92
TRIM55-204ENST00000353317 MORC4Q8TE76 937 aa9.32□□□□□ -0.92
TRIM55-204ENST00000353317 LRRC27Q9C0I9 530 aa9.32□□□□□ -0.92
TRIM55-204ENST00000353317 AIPL1Q9NZN9 384 aa9.32□□□□□ -0.92
TRIM55-204ENST00000353317 TMEM59LQ9UK28 342 aa9.32□□□□□ -0.92
TRIM55-204ENST00000353317 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.32□□□□□ -0.92
TRIM55-204ENST00000353317 STK24Q9Y6E0 443 aa9.32□□□□□ -0.92
TRIM55-204ENST00000353317 ZMYM2Q9UBW7 1377 aa9.32□□□□□ -0.92
TRIM55-204ENST00000353317 ADCY6O43306 1168 aa9.32□□□□□ -0.92
TRIM55-204ENST00000353317 NR1D1P20393 614 aa9.32□□□□□ -0.92
TRIM55-204ENST00000353317 JAK3P52333 1124 aa9.32□□□□□ -0.92
TRIM55-204ENST00000353317 MARSP56192 900 aaKnown RBP9.32□□□□□ -0.92
TRIM55-204ENST00000353317 KLHL30Q0D2K2 578 aa9.32□□□□□ -0.92
TRIM55-204ENST00000353317 GNPTABQ3T906 1256 aa9.32□□□□□ -0.92
TRIM55-204ENST00000353317 TRIM50Q86XT4 487 aa9.32□□□□□ -0.92
TRIM55-204ENST00000353317 CD302Q8IX05 232 aa9.32□□□□□ -0.92
TRIM55-204ENST00000353317 KLHL7Q8IXQ5 586 aa9.32□□□□□ -0.92
TRIM55-204ENST00000353317 MYCT1Q8N699 235 aa9.32□□□□□ -0.92
TRIM55-204ENST00000353317 KATNBL1Q9H079 304 aa9.32□□□□□ -0.92
TRIM55-204ENST00000353317 GOLPH3Q9H4A6 298 aa9.32□□□□□ -0.92
TRIM55-204ENST00000353317 LUC7LQ9NQ29 371 aaKnown RBP9.32□□□□□ -0.92
TRIM55-204ENST00000353317 DBR1Q9UK59 544 aaKnown RBP9.32□□□□□ -0.92
TRIM55-204ENST00000353317 IGKV6D-21A0A0A0MT36 114 aa9.31□□□□□ -0.92
TRIM55-204ENST00000353317 ARHGEF35A5YM69 484 aa9.31□□□□□ -0.92
TRIM55-204ENST00000353317 TISP43B9A030 160 aa9.31□□□□□ -0.92
TRIM55-204ENST00000353317 TGFB1I1O43294 461 aa9.31□□□□□ -0.92
TRIM55-204ENST00000353317 GGPS1O95749 300 aa9.31□□□□□ -0.92
TRIM55-204ENST00000353317 SNAI1O95863 264 aaPredicted RBP9.31□□□□□ -0.92
TRIM55-204ENST00000353317 SLC10A3P09131 477 aa9.31□□□□□ -0.92
TRIM55-204ENST00000353317 SUPT20HL2P0C7V6 817 aa9.31□□□□□ -0.92
TRIM55-204ENST00000353317 GUCY2CP25092 1073 aa9.31□□□□□ -0.92
TRIM55-204ENST00000353317 ECHS1P30084 290 aa9.31□□□□□ -0.92
TRIM55-204ENST00000353317 SFNP31947 248 aa9.31□□□□□ -0.92
TRIM55-204ENST00000353317 KCTD19Q17RG1 926 aaPredicted RBP9.31□□□□□ -0.92
TRIM55-204ENST00000353317 NAA35Q5VZE5 725 aa9.31□□□□□ -0.92
TRIM55-204ENST00000353317 TAPT1Q6NXT6 567 aa9.31□□□□□ -0.92
TRIM55-204ENST00000353317 KCNV1Q6PIU1 500 aa9.31□□□□□ -0.92
TRIM55-204ENST00000353317 ARMCX2Q7L311 632 aa9.31□□□□□ -0.92
TRIM55-204ENST00000353317 DNAAF5Q86Y56 855 aa9.31□□□□□ -0.92
TRIM55-204ENST00000353317 NEK9Q8TD19 979 aa9.31□□□□□ -0.92
TRIM55-204ENST00000353317 WHAMMQ8TF30 809 aa9.31□□□□□ -0.92
TRIM55-204ENST00000353317 BSNDQ8WZ55 320 aa9.31□□□□□ -0.92
TRIM55-204ENST00000353317 ATP6V1G3Q96LB4 118 aa9.31□□□□□ -0.92
TRIM55-204ENST00000353317 CEP63Q96MT8 703 aa9.31□□□□□ -0.92
TRIM55-204ENST00000353317 CEP89Q96ST8 783 aa9.31□□□□□ -0.92
TRIM55-204ENST00000353317 EPN3Q9H201 632 aa9.31□□□□□ -0.92
TRIM55-204ENST00000353317 GANQ9H2C0 597 aa9.31□□□□□ -0.92
TRIM55-204ENST00000353317 GPBP1L1Q9HC44 474 aaPredicted RBP9.31□□□□□ -0.92
TRIM55-204ENST00000353317 TLL2Q9Y6L7 1015 aa9.31□□□□□ -0.92
TRIM55-204ENST00000353317 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.31□□□□□ -0.92
TRIM55-204ENST00000353317 KCNK3O14649 394 aa9.31□□□□□ -0.92
TRIM55-204ENST00000353317 PPP1R37O75864 691 aa9.31□□□□□ -0.92
TRIM55-204ENST00000353317 CLSTN1O94985 981 aa9.31□□□□□ -0.92
TRIM55-204ENST00000353317 GCLCP48506 637 aaPredicted RBP9.31□□□□□ -0.92
TRIM55-204ENST00000353317 SEC24CP53992 1094 aa9.31□□□□□ -0.92
TRIM55-204ENST00000353317 PRKCEQ02156 737 aa9.31□□□□□ -0.92
TRIM55-204ENST00000353317 PTK2Q05397 1052 aa9.31□□□□□ -0.92
TRIM55-204ENST00000353317 GRM1Q13255 1194 aa9.31□□□□□ -0.92
TRIM55-204ENST00000353317 FAM110CQ1W6H9 321 aa9.31□□□□□ -0.92
TRIM55-204ENST00000353317 XKR9Q5GH70 373 aa9.31□□□□□ -0.92
TRIM55-204ENST00000353317 B4GALNT4Q76KP1 1039 aa9.31□□□□□ -0.92
TRIM55-204ENST00000353317 ZNF720Q7Z2F6 126 aa9.31□□□□□ -0.92
TRIM55-204ENST00000353317 IFNL1Q8IU54 200 aa9.31□□□□□ -0.92
TRIM55-204ENST00000353317 ZBTB10Q96DT7 871 aa9.31□□□□□ -0.92
TRIM55-204ENST00000353317 STRA6Q9BX79 667 aa9.31□□□□□ -0.92
TRIM55-204ENST00000353317 XPNPEP1Q9NQW7 623 aa9.31□□□□□ -0.92
TRIM55-204ENST00000353317 PDLIM7Q9NR12 457 aa9.31□□□□□ -0.92
TRIM55-204ENST00000353317 FLRT1Q9NZU1 646 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms