RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 KHDC1Q4VXA5 237 aaKnown RBP8.17□□□□□ -1.1
BRCA1-201ENST00000352993 TAF1BQ53T94 588 aaPredicted RBP8.17□□□□□ -1.1
BRCA1-201ENST00000352993 CFAP157Q5JU67 520 aa8.17□□□□□ -1.1
BRCA1-201ENST00000352993 CEP128Q6ZU80 1094 aa8.17□□□□□ -1.1
BRCA1-201ENST00000352993 ZNF365Q70YC5 407 aa8.17□□□□□ -1.1
BRCA1-201ENST00000352993 APLFQ8IW19 511 aaPredicted RBP8.17□□□□□ -1.1
BRCA1-201ENST00000352993 PRELID2Q8N945 189 aa8.17□□□□□ -1.1
BRCA1-201ENST00000352993 SLC44A5Q8NCS7 719 aa8.17□□□□□ -1.1
BRCA1-201ENST00000352993 ZFAND2BQ8WV99 257 aa8.17□□□□□ -1.1
BRCA1-201ENST00000352993 KRT35Q92764 455 aa8.17□□□□□ -1.1
BRCA1-201ENST00000352993 COA7Q96BR5 231 aa8.17□□□□□ -1.1
BRCA1-201ENST00000352993 GRAMD1AQ96CP6 724 aa8.17□□□□□ -1.1
BRCA1-201ENST00000352993 LRMDAQ9H2I8 198 aa8.17□□□□□ -1.1
BRCA1-201ENST00000352993 RHBDL2Q9NX52 303 aa8.17□□□□□ -1.1
BRCA1-201ENST00000352993 MAD2L2Q9UI95 211 aa8.17□□□□□ -1.1
BRCA1-201ENST00000352993 DIS3Q9Y2L1 958 aaKnown RBP8.17□□□□□ -1.1
BRCA1-201ENST00000352993 SYNGAP1Q96PV0 1343 aa8.17□□□□□ -1.1
BRCA1-201ENST00000352993 IGSF9BQ9UPX0 1349 aa8.17□□□□□ -1.1
BRCA1-201ENST00000352993 CFAP69A5D8W1 941 aa8.17□□□□□ -1.1
BRCA1-201ENST00000352993 ABLIM1O14639 778 aa8.17□□□□□ -1.1
BRCA1-201ENST00000352993 KRT36O76013 467 aa8.17□□□□□ -1.1
BRCA1-201ENST00000352993 LMNAP02545 664 aaKnown RBP8.17□□□□□ -1.1
BRCA1-201ENST00000352993 ADCY8P40145 1251 aa8.17□□□□□ -1.1
BRCA1-201ENST00000352993 SKIV2L2P42285 1042 aaKnown RBP8.17□□□□□ -1.1
BRCA1-201ENST00000352993 GRM4Q14833 912 aa8.17□□□□□ -1.1
BRCA1-201ENST00000352993 SGSM1Q2NKQ1 1148 aa8.17□□□□□ -1.1
BRCA1-201ENST00000352993 TTC27Q6P3X3 843 aa8.17□□□□□ -1.1
BRCA1-201ENST00000352993 SLFN11Q7Z7L1 901 aa8.17□□□□□ -1.1
BRCA1-201ENST00000352993 ANKRD35Q8N283 1001 aa8.17□□□□□ -1.1
BRCA1-201ENST00000352993 PHC3Q8NDX5 983 aa8.17□□□□□ -1.1
BRCA1-201ENST00000352993 SCFD1Q8WVM8 642 aa8.17□□□□□ -1.1
BRCA1-201ENST00000352993 C9orf72Q96LT7 481 aa8.17□□□□□ -1.1
BRCA1-201ENST00000352993 SERPINB12Q96P63 405 aa8.17□□□□□ -1.1
BRCA1-201ENST00000352993 NDNQ99608 321 aa8.17□□□□□ -1.1
BRCA1-201ENST00000352993 PCDHA12Q9UN75 941 aa8.17□□□□□ -1.1
BRCA1-201ENST00000352993 NIP7Q9Y221 180 aaKnown RBP eCLIP8.17□□□□□ -1.1
BRCA1-201ENST00000352993 CHKBQ9Y259 395 aa8.17□□□□□ -1.1
BRCA1-201ENST00000352993 PCDH11YQ9BZA8 1340 aa8.17□□□□□ -1.1
BRCA1-201ENST00000352993 GPR75-ASB3A0A0A6YYF3 556 aa8.17□□□□□ -1.1
BRCA1-201ENST00000352993 ERVV-2B6SEH9 535 aa8.17□□□□□ -1.1
BRCA1-201ENST00000352993 OPHN1O60890 802 aa8.17□□□□□ -1.1
BRCA1-201ENST00000352993 TTLL1O95922 423 aa8.17□□□□□ -1.1
BRCA1-201ENST00000352993 PLA2G4BP0C869 781 aa8.17□□□□□ -1.1
BRCA1-201ENST00000352993 SETSIPP0DME0 302 aa8.17□□□□□ -1.1
BRCA1-201ENST00000352993 DLATP10515 647 aaKnown RBP8.17□□□□□ -1.1
BRCA1-201ENST00000352993 DEUP1Q05D60 604 aa8.17□□□□□ -1.1
BRCA1-201ENST00000352993 RRP1BQ14684 758 aaKnown RBP8.17□□□□□ -1.1
BRCA1-201ENST00000352993 HP1BP3Q5SSJ5 553 aaPredicted RBP8.17□□□□□ -1.1
BRCA1-201ENST00000352993 ZNF746Q6NUN9 644 aaPredicted RBP8.17□□□□□ -1.1
BRCA1-201ENST00000352993 RFWD3Q6PCD5 774 aa8.17□□□□□ -1.1
BRCA1-201ENST00000352993 TRMT10CQ7L0Y3 403 aaKnown RBP8.17□□□□□ -1.1
BRCA1-201ENST00000352993 PDCD7Q8N8D1 485 aaKnown RBP8.17□□□□□ -1.1
BRCA1-201ENST00000352993 LNX1Q8TBB1 728 aaPredicted RBP8.17□□□□□ -1.1
BRCA1-201ENST00000352993 OPTNQ96CV9 577 aa8.17□□□□□ -1.1
BRCA1-201ENST00000352993 PWWP2AQ96N64 755 aa8.17□□□□□ -1.1
BRCA1-201ENST00000352993 CYTH2Q99418 400 aa8.17□□□□□ -1.1
BRCA1-201ENST00000352993 UBN1Q9NPG3 1134 aa8.17□□□□□ -1.1
BRCA1-201ENST00000352993 SAP30BPQ9UHR5 308 aaKnown RBP8.17□□□□□ -1.1
BRCA1-201ENST00000352993 AJAP1Q9UKB5 411 aaPredicted RBP8.17□□□□□ -1.1
BRCA1-201ENST00000352993 BCS1LQ9Y276 419 aa8.17□□□□□ -1.1
BRCA1-201ENST00000352993 SUGT1Q9Y2Z0 365 aa8.17□□□□□ -1.1
BRCA1-201ENST00000352993 ASB3Q9Y575 518 aa8.17□□□□□ -1.1
BRCA1-201ENST00000352993 SCN11AQ9UI33 1791 aa8.16□□□□□ -1.1
BRCA1-201ENST00000352993 A0A0A6YYK5 440 aaPredicted RBP8.16□□□□□ -1.1
BRCA1-201ENST00000352993 MAGEA13PA6NCF6 341 aa8.16□□□□□ -1.1
BRCA1-201ENST00000352993 CCDC160A6NGH7 325 aa8.16□□□□□ -1.1
BRCA1-201ENST00000352993 M0R2N6 131 aa8.16□□□□□ -1.1
BRCA1-201ENST00000352993 GYG2O15488 501 aa8.16□□□□□ -1.1
BRCA1-201ENST00000352993 GSTA2P09210 222 aa8.16□□□□□ -1.1
BRCA1-201ENST00000352993 TAC1P20366 129 aa8.16□□□□□ -1.1
BRCA1-201ENST00000352993 FOXN2P32314 431 aa8.16□□□□□ -1.1
BRCA1-201ENST00000352993 DRAP1Q14919 205 aaPredicted RBP8.16□□□□□ -1.1
BRCA1-201ENST00000352993 ECM1Q16610 540 aa8.16□□□□□ -1.1
BRCA1-201ENST00000352993 WASHC2DQ5SRD0 308 aa8.16□□□□□ -1.1
BRCA1-201ENST00000352993 MIGA2Q7L4E1 593 aa8.16□□□□□ -1.1
BRCA1-201ENST00000352993 CYP4X1Q8N118 509 aa8.16□□□□□ -1.1
BRCA1-201ENST00000352993 ZNF333Q96JL9 665 aa8.16□□□□□ -1.1
BRCA1-201ENST00000352993 TMEM165Q9HC07 324 aa8.16□□□□□ -1.1
BRCA1-201ENST00000352993 NPHS2Q9NP85 383 aa8.16□□□□□ -1.1
BRCA1-201ENST00000352993 TAS2R14Q9NYV8 317 aa8.16□□□□□ -1.1
BRCA1-201ENST00000352993 DNAJC12Q9UKB3 198 aa8.16□□□□□ -1.1
BRCA1-201ENST00000352993 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.16□□□□□ -1.1
BRCA1-201ENST00000352993 TCRBV7S2A1N4TA0A589 114 aa8.16□□□□□ -1.1
BRCA1-201ENST00000352993 POTEB3A0JP26 581 aa8.16□□□□□ -1.1
BRCA1-201ENST00000352993 POTECB2RU33 542 aa8.16□□□□□ -1.1
BRCA1-201ENST00000352993 CHKAP35790 457 aa8.16□□□□□ -1.1
BRCA1-201ENST00000352993 COILP38432 576 aaPredicted RBP8.16□□□□□ -1.1
BRCA1-201ENST00000352993 CASP4P49662 377 aa8.16□□□□□ -1.1
BRCA1-201ENST00000352993 DRG2P55039 364 aaKnown RBP8.16□□□□□ -1.1
BRCA1-201ENST00000352993 KRT17Q04695 432 aa8.16□□□□□ -1.1
BRCA1-201ENST00000352993 MCL1Q07820 350 aa8.16□□□□□ -1.1
BRCA1-201ENST00000352993 ZCWPW2Q504Y3 356 aa8.16□□□□□ -1.1
BRCA1-201ENST00000352993 FYB2Q5VWT5 728 aa8.16□□□□□ -1.1
BRCA1-201ENST00000352993 CGB2Q6NT52 195 aa8.16□□□□□ -1.1
BRCA1-201ENST00000352993 POTEBQ6S5H4 581 aa8.16□□□□□ -1.1
BRCA1-201ENST00000352993 DGKHQ86XP1 1220 aa8.16□□□□□ -1.1
BRCA1-201ENST00000352993 DZIP1Q86YF9 867 aaKnown RBP8.16□□□□□ -1.1
BRCA1-201ENST00000352993 C4orf33Q8N1A6 199 aa8.16□□□□□ -1.1
BRCA1-201ENST00000352993 DAGLBQ8NCG7 672 aa8.16□□□□□ -1.1
BRCA1-201ENST00000352993 SPIRE2Q8WWL2 714 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms