RNA–Protein interactions for RNA: ENST00000352845.3

PKP1-202, Transcript of plakophilin 1, humanhuman

TSL 5 BASIC

Gene PKP1, Length 2,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP1-202ENST00000352845 MIGA1Q8NAN2 632 aa11.36□□□□□ -0.59
PKP1-202ENST00000352845 SERPINB12Q96P63 405 aa11.36□□□□□ -0.59
PKP1-202ENST00000352845 MAGEF1Q9HAY2 307 aa11.36□□□□□ -0.59
PKP1-202ENST00000352845 PACSIN2Q9UNF0 486 aaPredicted RBP11.36□□□□□ -0.59
PKP1-202ENST00000352845 STXBP5LQ9Y2K9 1186 aa11.36□□□□□ -0.59
PKP1-202ENST00000352845 DUOX1Q9NRD9 1551 aa11.36□□□□□ -0.59
PKP1-202ENST00000352845 CNTNAP5Q8WYK1 1306 aa11.35□□□□□ -0.59
PKP1-202ENST00000352845 ANKRD36CQ5JPF3 1778 aa11.35□□□□□ -0.59
PKP1-202ENST00000352845 CCDC162PA2VCL2 907 aa11.35□□□□□ -0.59
PKP1-202ENST00000352845 TMEM110-MUSTN1A8MSY1 372 aa11.35□□□□□ -0.59
PKP1-202ENST00000352845 A8MXQ7 604 aa11.35□□□□□ -0.59
PKP1-202ENST00000352845 IRS4O14654 1257 aaPredicted RBP11.35□□□□□ -0.59
PKP1-202ENST00000352845 NKRFO15226 690 aaKnown RBP eCLIP11.35□□□□□ -0.59
PKP1-202ENST00000352845 STX2P32856 288 aa11.35□□□□□ -0.59
PKP1-202ENST00000352845 CDR2Q01850 454 aa11.35□□□□□ -0.59
PKP1-202ENST00000352845 DSG1Q02413 1049 aa11.35□□□□□ -0.59
PKP1-202ENST00000352845 TTLL12Q14166 644 aaPredicted RBP11.35□□□□□ -0.59
PKP1-202ENST00000352845 MAN2A1Q16706 1144 aa11.35□□□□□ -0.59
PKP1-202ENST00000352845 TCERG1LQ5VWI1 586 aa11.35□□□□□ -0.59
PKP1-202ENST00000352845 ARL6IP4Q66PJ3 421 aaKnown RBP11.35□□□□□ -0.59
PKP1-202ENST00000352845 KIF6Q6ZMV9 814 aa11.35□□□□□ -0.59
PKP1-202ENST00000352845 TMTC3Q6ZXV5 915 aa11.35□□□□□ -0.59
PKP1-202ENST00000352845 TMEM110Q86TL2 294 aa11.35□□□□□ -0.59
PKP1-202ENST00000352845 SDR16C5Q8N3Y7 309 aa11.35□□□□□ -0.59
PKP1-202ENST00000352845 CERKQ8TCT0 537 aa11.35□□□□□ -0.59
PKP1-202ENST00000352845 DQX1Q8TE96 717 aaKnown RBP11.35□□□□□ -0.59
PKP1-202ENST00000352845 LRRC15Q8TF66 581 aa11.35□□□□□ -0.59
PKP1-202ENST00000352845 DHRS1Q96LJ7 313 aa11.35□□□□□ -0.59
PKP1-202ENST00000352845 SIKE1Q9BRV8 207 aa11.35□□□□□ -0.59
PKP1-202ENST00000352845 NACAP1Q9BZK3 213 aa11.35□□□□□ -0.59
PKP1-202ENST00000352845 RNF41Q9H4P4 317 aaPredicted RBP11.35□□□□□ -0.59
PKP1-202ENST00000352845 NRDE2Q9H7Z3 1164 aa11.35□□□□□ -0.59
PKP1-202ENST00000352845 FAIMQ9NVQ4 179 aa11.35□□□□□ -0.59
PKP1-202ENST00000352845 DNAJB4Q9UDY4 337 aa11.35□□□□□ -0.59
PKP1-202ENST00000352845 CROTQ9UKG9 612 aa11.35□□□□□ -0.59
PKP1-202ENST00000352845 SLIT2O94813 1529 aa11.35□□□□□ -0.59
PKP1-202ENST00000352845 SPATA31A5Q5VU36 1347 aa11.35□□□□□ -0.59
PKP1-202ENST00000352845 SPATA31A7Q8IWB4 1347 aa11.35□□□□□ -0.59
PKP1-202ENST00000352845 HTR3EA5X5Y0 456 aa11.35□□□□□ -0.59
PKP1-202ENST00000352845 P4HA2O15460 535 aa11.35□□□□□ -0.59
PKP1-202ENST00000352845 ZWINTO95229 277 aa11.35□□□□□ -0.59
PKP1-202ENST00000352845 ZCCHC18P0CG32 403 aa11.35□□□□□ -0.59
PKP1-202ENST00000352845 HDAC4P56524 1084 aa11.35□□□□□ -0.59
PKP1-202ENST00000352845 PTENP60484 403 aa11.35□□□□□ -0.59
PKP1-202ENST00000352845 PDCD4Q53EL6 469 aaKnown RBP11.35□□□□□ -0.59
PKP1-202ENST00000352845 RC3H1Q5TC82 1133 aaKnown RBP11.35□□□□□ -0.59
PKP1-202ENST00000352845 CGB2Q6NT52 195 aa11.35□□□□□ -0.59
PKP1-202ENST00000352845 PIK3AP1Q6ZUJ8 805 aa11.35□□□□□ -0.59
PKP1-202ENST00000352845 ACAD11Q709F0 780 aa11.35□□□□□ -0.59
PKP1-202ENST00000352845 PHLDB2Q86SQ0 1253 aa11.35□□□□□ -0.59
PKP1-202ENST00000352845 CROCCP3Q8IVE0 287 aa11.35□□□□□ -0.59
PKP1-202ENST00000352845 SYCE1Q8N0S2 351 aa11.35□□□□□ -0.59
PKP1-202ENST00000352845 RIBC1Q8N443 379 aaPredicted RBP11.35□□□□□ -0.59
PKP1-202ENST00000352845 ARL10Q8N8L6 244 aa11.35□□□□□ -0.59
PKP1-202ENST00000352845 ARHGEF2Q92974 986 aaKnown RBP11.35□□□□□ -0.59
PKP1-202ENST00000352845 EIF2AQ9BY44 585 aaKnown RBP11.35□□□□□ -0.59
PKP1-202ENST00000352845 PITPNM3Q9BZ71 974 aa11.35□□□□□ -0.59
PKP1-202ENST00000352845 NACA2Q9H009 215 aa11.35□□□□□ -0.59
PKP1-202ENST00000352845 TMEM60Q9H2L4 133 aa11.35□□□□□ -0.59
PKP1-202ENST00000352845 CEP72Q9P209 647 aa11.35□□□□□ -0.59
PKP1-202ENST00000352845 ATP6V0A2Q9Y487 856 aa11.35□□□□□ -0.59
PKP1-202ENST00000352845 SMIM23A6NLE4 172 aa11.34□□□□□ -0.59
PKP1-202ENST00000352845 DDX3XO00571 662 aaKnown RBP eCLIP11.34□□□□□ -0.59
PKP1-202ENST00000352845 EPHB6O15197 1021 aa11.34□□□□□ -0.59
PKP1-202ENST00000352845 ZBTB48P10074 688 aaPredicted RBP11.34□□□□□ -0.59
PKP1-202ENST00000352845 ETS2P15036 469 aa11.34□□□□□ -0.59
PKP1-202ENST00000352845 HOXA7P31268 230 aaPredicted RBP11.34□□□□□ -0.59
PKP1-202ENST00000352845 MCM7P33993 719 aa11.34□□□□□ -0.59
PKP1-202ENST00000352845 DR1Q01658 176 aa11.34□□□□□ -0.59
PKP1-202ENST00000352845 MAP3K10Q02779 954 aa11.34□□□□□ -0.59
PKP1-202ENST00000352845 MYBPC2Q14324 1141 aa11.34□□□□□ -0.59
PKP1-202ENST00000352845 LRRC14Q15048 493 aa11.34□□□□□ -0.59
PKP1-202ENST00000352845 INF2Q27J81 1249 aa11.34□□□□□ -0.59
PKP1-202ENST00000352845 HSP90AA5PQ58FG0 334 aa11.34□□□□□ -0.59
PKP1-202ENST00000352845 SOGA3Q5TF21 947 aa11.34□□□□□ -0.59
PKP1-202ENST00000352845 TMEM53Q6P2H8 277 aa11.34□□□□□ -0.59
PKP1-202ENST00000352845 TMC4Q7Z404 712 aa11.34□□□□□ -0.59
PKP1-202ENST00000352845 SRBD1Q8N5C6 995 aaKnown RBP11.34□□□□□ -0.59
PKP1-202ENST00000352845 METTL13Q8N6R0 699 aa11.34□□□□□ -0.59
PKP1-202ENST00000352845 LRRC57Q8N9N7 239 aa11.34□□□□□ -0.59
PKP1-202ENST00000352845 SDR42E1Q8WUS8 393 aa11.34□□□□□ -0.59
PKP1-202ENST00000352845 CTNNBL1Q8WYA6 563 aaPredicted RBP11.34□□□□□ -0.59
PKP1-202ENST00000352845 C8orf37Q96NL8 207 aa11.34□□□□□ -0.59
PKP1-202ENST00000352845 ZSCAN10Q96SZ4 725 aaPredicted RBP11.34□□□□□ -0.59
PKP1-202ENST00000352845 CHKBQ9Y259 395 aa11.34□□□□□ -0.59
PKP1-202ENST00000352845 RPTORQ8N122 1335 aa11.34□□□□□ -0.59
PKP1-202ENST00000352845 MYH1P12882 1939 aa11.34□□□□□ -0.59
PKP1-202ENST00000352845 MAGEB2O15479 319 aa11.33□□□□□ -0.59
PKP1-202ENST00000352845 CCDC22O60826 627 aa11.33□□□□□ -0.59
PKP1-202ENST00000352845 T-ENOLP0DO92 83 aa11.33□□□□□ -0.59
PKP1-202ENST00000352845 RARGP13631 454 aa11.33□□□□□ -0.59
PKP1-202ENST00000352845 NAT1P18440 290 aa11.33□□□□□ -0.59
PKP1-202ENST00000352845 RPL26P61254 145 aaKnown RBP11.33□□□□□ -0.59
PKP1-202ENST00000352845 ANKRD40Q6AI12 368 aa11.33□□□□□ -0.59
PKP1-202ENST00000352845 THOC7Q6I9Y2 204 aaKnown RBP11.33□□□□□ -0.59
PKP1-202ENST00000352845 VSTM1Q6UX27 236 aa11.33□□□□□ -0.59
PKP1-202ENST00000352845 MARCH10Q8NA82 808 aaPredicted RBP11.33□□□□□ -0.59
PKP1-202ENST00000352845 MGARPQ8TDB4 240 aa11.33□□□□□ -0.59
PKP1-202ENST00000352845 EPS8L3Q8TE67 593 aaKnown RBP11.33□□□□□ -0.59
PKP1-202ENST00000352845 ESR2Q92731 530 aa11.33□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms