RNA–Protein interactions for RNA: ENST00000347662.8

TRAF3-201, Transcript of TNF receptor associated factor 3, humanhuman

TSL 5 BASIC

Gene TRAF3, Length 7,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-201ENST00000347662 SNRNP48Q6IEG0 339 aaKnown RBP12.51□□□□□ -0.41
TRAF3-201ENST00000347662 LUZP2Q86TE4 346 aa12.51□□□□□ -0.41
TRAF3-201ENST00000347662 ZNF668Q96K58 619 aaPredicted RBP12.51□□□□□ -0.41
TRAF3-201ENST00000347662 RMDN3Q96TC7 470 aa12.51□□□□□ -0.41
TRAF3-201ENST00000347662 SPON2Q9BUD6 331 aa12.51□□□□□ -0.41
TRAF3-201ENST00000347662 MAGEB5Q9BZ81 275 aa12.51□□□□□ -0.41
TRAF3-201ENST00000347662 CLASP1Q7Z460 1538 aa12.51□□□□□ -0.41
TRAF3-201ENST00000347662 MDM2Q00987 491 aaPredicted RBP12.51□□□□□ -0.41
TRAF3-201ENST00000347662 CACNB2Q08289 660 aaPredicted RBP12.51□□□□□ -0.41
TRAF3-201ENST00000347662 BFSP2Q13515 415 aa12.51□□□□□ -0.41
TRAF3-201ENST00000347662 LRRC41Q15345 812 aa12.51□□□□□ -0.41
TRAF3-201ENST00000347662 SIX5Q8N196 739 aa12.51□□□□□ -0.41
TRAF3-201ENST00000347662 ACCSQ96QU6 501 aa12.51□□□□□ -0.41
TRAF3-201ENST00000347662 NEUROD4Q9HD90 331 aa12.51□□□□□ -0.41
TRAF3-201ENST00000347662 ALKQ9UM73 1620 aa12.51□□□□□ -0.41
TRAF3-201ENST00000347662 RFX3P48380 749 aa12.51□□□□□ -0.41
TRAF3-201ENST00000347662 C1orf146Q5VVC0 180 aa12.51□□□□□ -0.41
TRAF3-201ENST00000347662 EXOC4Q96A65 974 aa12.51□□□□□ -0.41
TRAF3-201ENST00000347662 BRIP1Q9BX63 1249 aa12.51□□□□□ -0.41
TRAF3-201ENST00000347662 BBS2Q9BXC9 721 aa12.51□□□□□ -0.41
TRAF3-201ENST00000347662 AURKCQ9UQB9 309 aa12.51□□□□□ -0.41
TRAF3-201ENST00000347662 MYO3BQ8WXR4 1341 aa12.51□□□□□ -0.41
TRAF3-201ENST00000347662 ADCY10Q96PN6 1610 aa12.51□□□□□ -0.41
TRAF3-201ENST00000347662 SERPINB10P48595 397 aa12.51□□□□□ -0.41
TRAF3-201ENST00000347662 AP1B1Q10567 949 aa12.51□□□□□ -0.41
TRAF3-201ENST00000347662 NME3Q13232 169 aa12.51□□□□□ -0.41
TRAF3-201ENST00000347662 RFX8Q6ZV50 586 aa12.51□□□□□ -0.41
TRAF3-201ENST00000347662 COG1Q8WTW3 980 aa12.51□□□□□ -0.41
TRAF3-201ENST00000347662 LSG1Q9H089 658 aaKnown RBP12.51□□□□□ -0.41
TRAF3-201ENST00000347662 TARSL2A2RTX5 802 aaKnown RBP12.51□□□□□ -0.41
TRAF3-201ENST00000347662 CCDC151A5D8V7 595 aa12.51□□□□□ -0.41
TRAF3-201ENST00000347662 PYGMP11217 842 aa12.51□□□□□ -0.41
TRAF3-201ENST00000347662 S100A5P33763 92 aa12.51□□□□□ -0.41
TRAF3-201ENST00000347662 SYT2Q8N9I0 419 aaPredicted RBP12.51□□□□□ -0.41
TRAF3-201ENST00000347662 AGR3Q8TD06 166 aa12.51□□□□□ -0.41
TRAF3-201ENST00000347662 CYP2E1P05181 493 aaPredicted RBP12.5□□□□□ -0.41
TRAF3-201ENST00000347662 C2orf54Q08AI8 447 aa12.5□□□□□ -0.41
TRAF3-201ENST00000347662 SEMA3FQ13275 785 aa12.5□□□□□ -0.41
TRAF3-201ENST00000347662 FAM160B2Q86V87 743 aa12.5□□□□□ -0.41
TRAF3-201ENST00000347662 CHAMP1Q96JM3 812 aa12.5□□□□□ -0.41
TRAF3-201ENST00000347662 USP17L10C9JJH3 530 aa12.5□□□□□ -0.41
TRAF3-201ENST00000347662 ALDH6A1Q02252 535 aaKnown RBP12.5□□□□□ -0.41
TRAF3-201ENST00000347662 C6orf118Q5T5N4 469 aa12.5□□□□□ -0.41
TRAF3-201ENST00000347662 USP17L5A8MUK1 530 aa12.5□□□□□ -0.41
TRAF3-201ENST00000347662 SOAT1P35610 550 aa12.5□□□□□ -0.41
TRAF3-201ENST00000347662 HPCAP84074 193 aa12.5□□□□□ -0.41
TRAF3-201ENST00000347662 ALS2CLQ60I27 953 aa12.5□□□□□ -0.41
TRAF3-201ENST00000347662 KDELC2Q7Z4H8 507 aa12.5□□□□□ -0.41
TRAF3-201ENST00000347662 ZNF555Q8NEP9 628 aa12.5□□□□□ -0.41
TRAF3-201ENST00000347662 TADA1Q96BN2 335 aa12.5□□□□□ -0.41
TRAF3-201ENST00000347662 BTBD6Q96KE9 485 aa12.5□□□□□ -0.41
TRAF3-201ENST00000347662 LBHD1Q9BQE6 289 aaPredicted RBP12.5□□□□□ -0.41
TRAF3-201ENST00000347662 RNF26Q9BY78 433 aaPredicted RBP12.5□□□□□ -0.41
TRAF3-201ENST00000347662 GALNT8Q9NY28 637 aa12.5□□□□□ -0.41
TRAF3-201ENST00000347662 HOXC10Q9NYD6 342 aa12.5□□□□□ -0.41
TRAF3-201ENST00000347662 SPATA31A6Q5VVP1 1343 aa12.5□□□□□ -0.41
TRAF3-201ENST00000347662 CLTCL1P53675 1640 aa12.5□□□□□ -0.41
TRAF3-201ENST00000347662 H0Y3Z8 333 aa12.5□□□□□ -0.41
TRAF3-201ENST00000347662 RAB14P61106 215 aa12.5□□□□□ -0.41
TRAF3-201ENST00000347662 CENPUQ71F23 418 aa12.5□□□□□ -0.41
TRAF3-201ENST00000347662 SH3GL3Q99963 347 aa12.5□□□□□ -0.41
TRAF3-201ENST00000347662 WDR11Q9BZH6 1224 aa12.5□□□□□ -0.41
TRAF3-201ENST00000347662 MCM8Q9UJA3 840 aa12.5□□□□□ -0.41
TRAF3-201ENST00000347662 CPDO75976 1380 aa12.5□□□□□ -0.41
TRAF3-201ENST00000347662 GFPT2O94808 682 aa12.5□□□□□ -0.41
TRAF3-201ENST00000347662 ACSL3O95573 720 aa12.5□□□□□ -0.41
TRAF3-201ENST00000347662 TCP1P17987 556 aaKnown RBP12.5□□□□□ -0.41
TRAF3-201ENST00000347662 PRAMEP78395 509 aa12.5□□□□□ -0.41
TRAF3-201ENST00000347662 MICALL2Q8IY33 904 aa12.5□□□□□ -0.41
TRAF3-201ENST00000347662 RMDN1Q96DB5 314 aa12.5□□□□□ -0.41
TRAF3-201ENST00000347662 AIFM3Q96NN9 605 aa12.5□□□□□ -0.41
TRAF3-201ENST00000347662 XPO4Q9C0E2 1151 aaKnown RBP12.5□□□□□ -0.41
TRAF3-201ENST00000347662 KLHL31Q9H511 634 aa12.5□□□□□ -0.41
TRAF3-201ENST00000347662 SESN1Q9Y6P5 492 aa12.5□□□□□ -0.41
TRAF3-201ENST00000347662 NDUFA8P51970 172 aa12.5□□□□□ -0.41
TRAF3-201ENST00000347662 ICA1LQ8NDH6 482 aa12.5□□□□□ -0.41
TRAF3-201ENST00000347662 RAET1EQ8TD07 263 aa12.5□□□□□ -0.41
TRAF3-201ENST00000347662 ELP3Q9H9T3 547 aa12.5□□□□□ -0.41
TRAF3-201ENST00000347662 PDE11AQ9HCR9 933 aa12.5□□□□□ -0.41
TRAF3-201ENST00000347662 RNF123Q5XPI4 1314 aa12.49□□□□□ -0.41
TRAF3-201ENST00000347662 COPEO14579 308 aa12.49□□□□□ -0.41
TRAF3-201ENST00000347662 KRT75O95678 551 aa12.49□□□□□ -0.41
TRAF3-201ENST00000347662 ST13P50502 369 aaKnown RBP12.49□□□□□ -0.41
TRAF3-201ENST00000347662 NANOGNBQ7Z5D8 188 aa12.49□□□□□ -0.41
TRAF3-201ENST00000347662 TSSK1BQ9BXA7 367 aa12.49□□□□□ -0.41
TRAF3-201ENST00000347662 DFFAO00273 331 aa12.49□□□□□ -0.41
TRAF3-201ENST00000347662 NMT2O60551 498 aa12.49□□□□□ -0.41
TRAF3-201ENST00000347662 COBLL1Q53SF7 1204 aa12.49□□□□□ -0.41
TRAF3-201ENST00000347662 ANKRD40Q6AI12 368 aa12.49□□□□□ -0.41
TRAF3-201ENST00000347662 PPIEQ9UNP9 301 aaKnown RBP12.49□□□□□ -0.41
TRAF3-201ENST00000347662 ZC3H4Q9UPT8 1303 aaKnown RBP12.49□□□□□ -0.41
TRAF3-201ENST00000347662 SMARCA1P28370 1054 aa12.49□□□□□ -0.41
TRAF3-201ENST00000347662 TWF2Q6IBS0 349 aaKnown RBP12.49□□□□□ -0.41
TRAF3-201ENST00000347662 MARCH10Q8NA82 808 aaPredicted RBP12.49□□□□□ -0.41
TRAF3-201ENST00000347662 RNPEPQ9H4A4 650 aa12.49□□□□□ -0.41
TRAF3-201ENST00000347662 GDAQ9Y2T3 454 aa12.49□□□□□ -0.41
TRAF3-201ENST00000347662 JRKLQ9Y4A0 524 aa12.49□□□□□ -0.41
TRAF3-201ENST00000347662 PEX1O43933 1283 aa12.49□□□□□ -0.41
TRAF3-201ENST00000347662 ZNF157P51786 506 aaPredicted RBP12.49□□□□□ -0.41
TRAF3-201ENST00000347662 WDR75Q8IWA0 830 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms