RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 ATP6V1G3Q96LB4 118 aa6.54□□□□□ -1.36
CLCN3-201ENST00000347613 FAM107BQ9H098 131 aa6.54□□□□□ -1.36
CLCN3-201ENST00000347613 GLT8D2Q9H1C3 349 aa6.54□□□□□ -1.36
CLCN3-201ENST00000347613 HERC5Q9UII4 1024 aaKnown RBP6.54□□□□□ -1.36
CLCN3-201ENST00000347613 GOLGA8KD6RF30 607 aa6.53□□□□□ -1.36
CLCN3-201ENST00000347613 FLOT1O75955 427 aa6.53□□□□□ -1.36
CLCN3-201ENST00000347613 ICAM1P05362 532 aa6.53□□□□□ -1.36
CLCN3-201ENST00000347613 TMEM253P0C7T8 217 aa6.53□□□□□ -1.36
CLCN3-201ENST00000347613 RPL21P46778 160 aaKnown RBP6.53□□□□□ -1.36
CLCN3-201ENST00000347613 SP4Q02446 784 aa6.53□□□□□ -1.36
CLCN3-201ENST00000347613 NFIL3Q16649 462 aa6.53□□□□□ -1.36
CLCN3-201ENST00000347613 SEZ6Q53EL9 994 aa6.53□□□□□ -1.36
CLCN3-201ENST00000347613 DUPD1Q68J44 220 aa6.53□□□□□ -1.36
CLCN3-201ENST00000347613 SPOPLQ6IQ16 392 aa6.53□□□□□ -1.36
CLCN3-201ENST00000347613 KCNV1Q6PIU1 500 aa6.53□□□□□ -1.36
CLCN3-201ENST00000347613 KDM7AQ6ZMT4 941 aa6.53□□□□□ -1.36
CLCN3-201ENST00000347613 MIER3Q7Z3K6 550 aa6.53□□□□□ -1.36
CLCN3-201ENST00000347613 HAUS6Q7Z4H7 955 aa6.53□□□□□ -1.36
CLCN3-201ENST00000347613 CD302Q8IX05 232 aa6.53□□□□□ -1.36
CLCN3-201ENST00000347613 ZKSCAN4Q969J2 545 aaPredicted RBP6.53□□□□□ -1.36
CLCN3-201ENST00000347613 METTL14Q9HCE5 456 aaKnown RBP6.53□□□□□ -1.36
CLCN3-201ENST00000347613 ATP8A1Q9Y2Q0 1164 aa6.53□□□□□ -1.36
CLCN3-201ENST00000347613 PAPPA2Q9BXP8 1791 aa6.53□□□□□ -1.36
CLCN3-201ENST00000347613 ARHGEF35A5YM69 484 aa6.53□□□□□ -1.36
CLCN3-201ENST00000347613 KIAA0391O15091 583 aaKnown RBP6.53□□□□□ -1.36
CLCN3-201ENST00000347613 TCF4P15884 667 aa6.53□□□□□ -1.36
CLCN3-201ENST00000347613 FERP16591 822 aa6.53□□□□□ -1.36
CLCN3-201ENST00000347613 GAP43P17677 238 aa6.53□□□□□ -1.36
CLCN3-201ENST00000347613 NR1D1P20393 614 aa6.53□□□□□ -1.36
CLCN3-201ENST00000347613 RPL13P26373 211 aaKnown RBP6.53□□□□□ -1.36
CLCN3-201ENST00000347613 USP8P40818 1118 aa6.53□□□□□ -1.36
CLCN3-201ENST00000347613 ADCY2Q08462 1091 aa6.53□□□□□ -1.36
CLCN3-201ENST00000347613 PAK2Q13177 524 aa6.53□□□□□ -1.36
CLCN3-201ENST00000347613 RASA3Q14644 834 aa6.53□□□□□ -1.36
CLCN3-201ENST00000347613 MAATS1Q7Z4T9 603 aa6.53□□□□□ -1.36
CLCN3-201ENST00000347613 CCDC125Q86Z20 511 aa6.53□□□□□ -1.36
CLCN3-201ENST00000347613 SYCP3Q8IZU3 236 aa6.53□□□□□ -1.36
CLCN3-201ENST00000347613 TMEM161BQ8NDZ6 487 aa6.53□□□□□ -1.36
CLCN3-201ENST00000347613 RFFLQ8WZ73 363 aa6.53□□□□□ -1.36
CLCN3-201ENST00000347613 ZBTB45Q96K62 511 aaPredicted RBP6.53□□□□□ -1.36
CLCN3-201ENST00000347613 TEKT3Q9BXF9 490 aa6.53□□□□□ -1.36
CLCN3-201ENST00000347613 SEMA4AQ9H3S1 761 aa6.53□□□□□ -1.36
CLCN3-201ENST00000347613 ARHGEF10LQ9HCE6 1279 aa6.53□□□□□ -1.36
CLCN3-201ENST00000347613 GOPCQ9HD26 462 aa6.53□□□□□ -1.36
CLCN3-201ENST00000347613 PPANQ9NQ55 473 aaKnown RBP6.53□□□□□ -1.36
CLCN3-201ENST00000347613 TSKSQ9UJT2 592 aa6.53□□□□□ -1.36
CLCN3-201ENST00000347613 MKI67P46013 3256 aaKnown RBP6.53□□□□□ -1.36
CLCN3-201ENST00000347613 ZNF541Q9H0D2 1346 aa6.53□□□□□ -1.36
CLCN3-201ENST00000347613 COL2A1P02458 1487 aaPredicted RBP6.52□□□□□ -1.36
CLCN3-201ENST00000347613 A0A0A6YYK5 440 aaPredicted RBP6.52□□□□□ -1.36
CLCN3-201ENST00000347613 ATP4AP20648 1035 aa6.52□□□□□ -1.36
CLCN3-201ENST00000347613 GTF2BQ00403 316 aa6.52□□□□□ -1.36
CLCN3-201ENST00000347613 MAP3K10Q02779 954 aa6.52□□□□□ -1.36
CLCN3-201ENST00000347613 MTMR2Q13614 643 aa6.52□□□□□ -1.36
CLCN3-201ENST00000347613 MESDQ14696 234 aa6.52□□□□□ -1.36
CLCN3-201ENST00000347613 PTGISQ16647 500 aa6.52□□□□□ -1.36
CLCN3-201ENST00000347613 DEFB132Q7Z7B7 95 aa6.52□□□□□ -1.36
CLCN3-201ENST00000347613 LARGE2Q8N3Y3 721 aa6.52□□□□□ -1.36
CLCN3-201ENST00000347613 UBLCP1Q8WVY7 318 aaPredicted RBP6.52□□□□□ -1.36
CLCN3-201ENST00000347613 PBKQ96KB5 322 aa6.52□□□□□ -1.36
CLCN3-201ENST00000347613 JPH2Q9BR39 696 aaPredicted RBP6.52□□□□□ -1.36
CLCN3-201ENST00000347613 XPNPEP1Q9NQW7 623 aa6.52□□□□□ -1.36
CLCN3-201ENST00000347613 AAASQ9NRG9 546 aa6.52□□□□□ -1.36
CLCN3-201ENST00000347613 RNF14Q9UBS8 474 aa6.52□□□□□ -1.36
CLCN3-201ENST00000347613 NOVA2Q9UNW9 492 aaKnown RBP6.52□□□□□ -1.36
CLCN3-201ENST00000347613 PTPN22Q9Y2R2 807 aa6.52□□□□□ -1.36
CLCN3-201ENST00000347613 BZW2Q9Y6E2 419 aaKnown RBP6.52□□□□□ -1.36
CLCN3-201ENST00000347613 UMODL1Q5DID0 1318 aa6.52□□□□□ -1.37
CLCN3-201ENST00000347613 CES2O00748 559 aa6.52□□□□□ -1.37
CLCN3-201ENST00000347613 RARAP10276 462 aa6.52□□□□□ -1.37
CLCN3-201ENST00000347613 TNFAIP3P21580 790 aa6.52□□□□□ -1.37
CLCN3-201ENST00000347613 MDH1P40925 334 aaKnown RBP6.52□□□□□ -1.37
CLCN3-201ENST00000347613 PSMC4P43686 418 aa6.52□□□□□ -1.37
CLCN3-201ENST00000347613 NPTX2P47972 431 aa6.52□□□□□ -1.37
CLCN3-201ENST00000347613 FNTAP49354 379 aa6.52□□□□□ -1.37
CLCN3-201ENST00000347613 MTMR1Q13613 665 aa6.52□□□□□ -1.37
CLCN3-201ENST00000347613 TMEM63BQ5T3F8 832 aa6.52□□□□□ -1.37
CLCN3-201ENST00000347613 NBPF12Q5TAG4 269 aaPredicted RBP6.52□□□□□ -1.37
CLCN3-201ENST00000347613 EMC10Q5UCC4 262 aa6.52□□□□□ -1.37
CLCN3-201ENST00000347613 SLC9A9Q8IVB4 645 aa6.52□□□□□ -1.37
CLCN3-201ENST00000347613 ZNF473Q8WTR7 871 aaKnown RBP6.52□□□□□ -1.37
CLCN3-201ENST00000347613 ATG4AQ8WYN0 398 aa6.52□□□□□ -1.37
CLCN3-201ENST00000347613 ATG4CQ96DT6 458 aa6.52□□□□□ -1.37
CLCN3-201ENST00000347613 ZBTB10Q96DT7 871 aa6.52□□□□□ -1.37
CLCN3-201ENST00000347613 CAMKK2Q96RR4 588 aa6.52□□□□□ -1.37
CLCN3-201ENST00000347613 CCT8L2Q96SF2 557 aa6.52□□□□□ -1.37
CLCN3-201ENST00000347613 SLC38A10Q9HBR0 1119 aa6.52□□□□□ -1.37
CLCN3-201ENST00000347613 AMFRQ9UKV5 643 aa6.52□□□□□ -1.37
CLCN3-201ENST00000347613 PHIPQ8WWQ0 1821 aa6.52□□□□□ -1.37
CLCN3-201ENST00000347613 POLR2AP24928 1970 aaKnown RBP6.52□□□□□ -1.37
CLCN3-201ENST00000347613 SLC26A4O43511 780 aa6.52□□□□□ -1.37
CLCN3-201ENST00000347613 PLS3P13797 630 aa6.52□□□□□ -1.37
CLCN3-201ENST00000347613 FGFR4P22455 802 aa6.52□□□□□ -1.37
CLCN3-201ENST00000347613 CNGA1P29973 690 aa6.52□□□□□ -1.37
CLCN3-201ENST00000347613 CTNNA1P35221 906 aaKnown RBP6.52□□□□□ -1.37
CLCN3-201ENST00000347613 PLTPP55058 493 aa6.52□□□□□ -1.37
CLCN3-201ENST00000347613 PTENP60484 403 aa6.52□□□□□ -1.37
CLCN3-201ENST00000347613 MAGOHP61326 146 aaKnown RBP6.52□□□□□ -1.37
CLCN3-201ENST00000347613 C10orf76Q5T2E6 689 aa6.52□□□□□ -1.37
CLCN3-201ENST00000347613 FAM102BQ5T8I3 360 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms