RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 T-ENOLP0DO92 83 aa16.43■□□□□ 0.22
LMNA-201ENST00000347559 COILP38432 576 aaPredicted RBP16.43■□□□□ 0.22
LMNA-201ENST00000347559 TMED2Q15363 201 aa16.43■□□□□ 0.22
LMNA-201ENST00000347559 EPM2AIP1Q7L775 607 aaPredicted RBP16.43■□□□□ 0.22
LMNA-201ENST00000347559 APLFQ8IW19 511 aaPredicted RBP16.43■□□□□ 0.22
LMNA-201ENST00000347559 C1orf54Q8WWF1 131 aa16.43■□□□□ 0.22
LMNA-201ENST00000347559 FAM136AQ96C01 138 aa16.43■□□□□ 0.22
LMNA-201ENST00000347559 KRT36O76013 467 aa16.43■□□□□ 0.22
LMNA-201ENST00000347559 CETPP11597 493 aa16.43■□□□□ 0.22
LMNA-201ENST00000347559 CCDC15Q0P6D6 951 aa16.43■□□□□ 0.22
LMNA-201ENST00000347559 PDIA5Q14554 519 aa16.43■□□□□ 0.22
LMNA-201ENST00000347559 UBE2SQ16763 222 aa16.43■□□□□ 0.22
LMNA-201ENST00000347559 TAF1BQ53T94 588 aaPredicted RBP16.43■□□□□ 0.22
LMNA-201ENST00000347559 WASHC2DQ5SRD0 308 aa16.43■□□□□ 0.22
LMNA-201ENST00000347559 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.43■□□□□ 0.22
LMNA-201ENST00000347559 MRRFQ96E11 262 aaKnown RBP16.43■□□□□ 0.22
LMNA-201ENST00000347559 OCEL1Q9H607 264 aa16.43■□□□□ 0.22
LMNA-201ENST00000347559 PCYOX1Q9UHG3 505 aa16.43■□□□□ 0.22
LMNA-201ENST00000347559 PCDHA12Q9UN75 941 aa16.43■□□□□ 0.22
LMNA-201ENST00000347559 NAALADL1Q9UQQ1 740 aa16.43■□□□□ 0.22
LMNA-201ENST00000347559 PCDHA3Q9Y5H8 950 aa16.43■□□□□ 0.22
LMNA-201ENST00000347559 PCDHA2Q9Y5H9 948 aa16.43■□□□□ 0.22
LMNA-201ENST00000347559 RASA4BC9J798 803 aa16.43■□□□□ 0.22
LMNA-201ENST00000347559 RASA4O43374 803 aa16.43■□□□□ 0.22
LMNA-201ENST00000347559 PYGMP11217 842 aa16.43■□□□□ 0.22
LMNA-201ENST00000347559 GSTT1P30711 240 aa16.43■□□□□ 0.22
LMNA-201ENST00000347559 RASSF2P50749 326 aa16.43■□□□□ 0.22
LMNA-201ENST00000347559 JAM2P57087 298 aa16.43■□□□□ 0.22
LMNA-201ENST00000347559 DSTYKQ6XUX3 929 aa16.43■□□□□ 0.22
LMNA-201ENST00000347559 RFX8Q6ZV50 586 aa16.43■□□□□ 0.22
LMNA-201ENST00000347559 MIGA2Q7L4E1 593 aa16.43■□□□□ 0.22
LMNA-201ENST00000347559 FRMD5Q7Z6J6 570 aa16.43■□□□□ 0.22
LMNA-201ENST00000347559 CPNE8Q86YQ8 564 aa16.43■□□□□ 0.22
LMNA-201ENST00000347559 FBXO41Q8TF61 875 aa16.43■□□□□ 0.22
LMNA-201ENST00000347559 SPIRE2Q8WWL2 714 aa16.43■□□□□ 0.22
LMNA-201ENST00000347559 GRAMD1AQ96CP6 724 aa16.43■□□□□ 0.22
LMNA-201ENST00000347559 SAP30BPQ9UHR5 308 aaKnown RBP16.43■□□□□ 0.22
LMNA-201ENST00000347559 BCS1LQ9Y276 419 aa16.43■□□□□ 0.22
LMNA-201ENST00000347559 CAPN9O14815 690 aa16.42■□□□□ 0.22
LMNA-201ENST00000347559 ECEL1O95672 775 aa16.42■□□□□ 0.22
LMNA-201ENST00000347559 BAG3O95817 575 aa16.42■□□□□ 0.22
LMNA-201ENST00000347559 DLATP10515 647 aaKnown RBP16.42■□□□□ 0.22
LMNA-201ENST00000347559 MARK3P27448 753 aa16.42■□□□□ 0.22
LMNA-201ENST00000347559 SOX5P35711 763 aa16.42■□□□□ 0.22
LMNA-201ENST00000347559 ACVR2BQ13705 512 aa16.42■□□□□ 0.22
LMNA-201ENST00000347559 EDRF1Q3B7T1 1238 aa16.42■□□□□ 0.22
LMNA-201ENST00000347559 INPP5DQ92835 1189 aa16.42■□□□□ 0.22
LMNA-201ENST00000347559 IKZF4Q9H2S9 585 aa16.42■□□□□ 0.22
LMNA-201ENST00000347559 AAASQ9NRG9 546 aa16.42■□□□□ 0.22
LMNA-201ENST00000347559 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.42■□□□□ 0.22
LMNA-201ENST00000347559 CHCHD3Q9NX63 227 aaKnown RBP16.42■□□□□ 0.22
LMNA-201ENST00000347559 TFCP2L1Q9NZI6 479 aa16.42■□□□□ 0.22
LMNA-201ENST00000347559 DNAJC12Q9UKB3 198 aa16.42■□□□□ 0.22
LMNA-201ENST00000347559 MTUS1Q9ULD2 1270 aa16.42■□□□□ 0.22
LMNA-201ENST00000347559 NCANO14594 1321 aa16.42■□□□□ 0.22
LMNA-201ENST00000347559 FRMPD2Q68DX3 1309 aaPredicted RBP16.42■□□□□ 0.22
LMNA-201ENST00000347559 GSTTP1A0A1W2PQM5 241 aa16.42■□□□□ 0.22
LMNA-201ENST00000347559 TOM1O60784 492 aa16.42■□□□□ 0.22
LMNA-201ENST00000347559 SCNN1BP51168 640 aa16.42■□□□□ 0.22
LMNA-201ENST00000347559 WDR4P57081 412 aaKnown RBP16.42■□□□□ 0.22
LMNA-201ENST00000347559 DYNC1I2Q13409 638 aaKnown RBP16.42■□□□□ 0.22
LMNA-201ENST00000347559 ZNF746Q6NUN9 644 aaPredicted RBP16.42■□□□□ 0.22
LMNA-201ENST00000347559 FOXR2Q6PJQ5 311 aa16.42■□□□□ 0.22
LMNA-201ENST00000347559 SLC30A5Q8TAD4 765 aa16.42■□□□□ 0.22
LMNA-201ENST00000347559 USP20Q9Y2K6 914 aa16.42■□□□□ 0.22
LMNA-201ENST00000347559 CYP11B2P19099 503 aa16.41■□□□□ 0.22
LMNA-201ENST00000347559 CDR2Q01850 454 aa16.41■□□□□ 0.22
LMNA-201ENST00000347559 KRT17Q04695 432 aa16.41■□□□□ 0.22
LMNA-201ENST00000347559 PPP1R21Q6ZMI0 780 aa16.41■□□□□ 0.22
LMNA-201ENST00000347559 SYCP3Q8IZU3 236 aa16.41■□□□□ 0.22
LMNA-201ENST00000347559 KLHL23Q8NBE8 558 aa16.41■□□□□ 0.22
LMNA-201ENST00000347559 NRG4Q8WWG1 115 aa16.41■□□□□ 0.22
LMNA-201ENST00000347559 C9orf72Q96LT7 481 aa16.41■□□□□ 0.22
LMNA-201ENST00000347559 DDX25Q9UHL0 483 aaKnown RBP16.41■□□□□ 0.22
LMNA-201ENST00000347559 MEIS1O00470 390 aa16.41■□□□□ 0.22
LMNA-201ENST00000347559 ATMINO43313 823 aaPredicted RBP16.41■□□□□ 0.22
LMNA-201ENST00000347559 CREB3O43889 395 aa16.41■□□□□ 0.22
LMNA-201ENST00000347559 DCTN3O75935 186 aa16.41■□□□□ 0.22
LMNA-201ENST00000347559 COMTP21964 271 aa16.41■□□□□ 0.22
LMNA-201ENST00000347559 KLRK1P26718 216 aa16.41■□□□□ 0.22
LMNA-201ENST00000347559 YARSP54577 528 aaKnown RBP16.41■□□□□ 0.22
LMNA-201ENST00000347559 SFR1Q86XK3 245 aa16.41■□□□□ 0.22
LMNA-201ENST00000347559 SLC35C1Q96A29 364 aa16.41■□□□□ 0.22
LMNA-201ENST00000347559 FAM84BQ96KN1 310 aaPredicted RBP16.41■□□□□ 0.22
LMNA-201ENST00000347559 ZSWIM1Q9BR11 485 aa16.41■□□□□ 0.22
LMNA-201ENST00000347559 BCAS3Q9H6U6 928 aa16.41■□□□□ 0.22
LMNA-201ENST00000347559 TTC4O95801 387 aa16.41■□□□□ 0.22
LMNA-201ENST00000347559 IL2RBP14784 551 aa16.41■□□□□ 0.22
LMNA-201ENST00000347559 CTNNA2P26232 953 aa16.41■□□□□ 0.22
LMNA-201ENST00000347559 ADCY7P51828 1080 aa16.41■□□□□ 0.22
LMNA-201ENST00000347559 KNOP1Q1ED39 458 aaKnown RBP16.41■□□□□ 0.22
LMNA-201ENST00000347559 HHATQ5VTY9 493 aa16.41■□□□□ 0.22
LMNA-201ENST00000347559 CYP4F22Q6NT55 531 aa16.41■□□□□ 0.22
LMNA-201ENST00000347559 BICD1Q96G01 975 aa16.41■□□□□ 0.22
LMNA-201ENST00000347559 BTBD6Q96KE9 485 aa16.41■□□□□ 0.22
LMNA-201ENST00000347559 TRAPPC9Q96Q05 1148 aa16.41■□□□□ 0.22
LMNA-201ENST00000347559 NDNQ99608 321 aa16.41■□□□□ 0.22
LMNA-201ENST00000347559 PRDM11Q9NQV5 511 aa16.41■□□□□ 0.22
LMNA-201ENST00000347559 ZFP69BQ9UJL9 534 aa16.41■□□□□ 0.22
LMNA-201ENST00000347559 RPS6KL1Q9Y6S9 549 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms