RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 DCUN1D1Q96GG9 259 aa24.51■■□□□ 1.51
NPAS3-201ENST00000346562 CYTH2Q99418 400 aa24.51■■□□□ 1.51
NPAS3-201ENST00000346562 WNT8AQ9H1J5 351 aa24.51■■□□□ 1.51
NPAS3-201ENST00000346562 ABCB6Q9NP58 842 aa24.51■■□□□ 1.51
NPAS3-201ENST00000346562 GRID2IPA4D2P6 1211 aa24.51■■□□□ 1.51
NPAS3-201ENST00000346562 BCAR1P56945 870 aa24.51■■□□□ 1.51
NPAS3-201ENST00000346562 MTA3Q9BTC8 594 aa24.51■■□□□ 1.51
NPAS3-201ENST00000346562 SLC9A2Q9UBY0 812 aa24.51■■□□□ 1.51
NPAS3-201ENST00000346562 CDV3Q9UKY7 258 aaKnown RBP24.51■■□□□ 1.51
NPAS3-201ENST00000346562 FAM102AQ5T9C2 384 aaPredicted RBP24.51■■□□□ 1.51
NPAS3-201ENST00000346562 BTBD6Q96KE9 485 aa24.51■■□□□ 1.51
NPAS3-201ENST00000346562 TMEM260Q9NX78 707 aa24.51■■□□□ 1.51
NPAS3-201ENST00000346562 NDE1Q9NXR1 346 aa24.51■■□□□ 1.51
NPAS3-201ENST00000346562 CFAP69A5D8W1 941 aa24.5■■□□□ 1.51
NPAS3-201ENST00000346562 APOL1O14791 398 aa24.5■■□□□ 1.51
NPAS3-201ENST00000346562 LARGE1O95461 756 aa24.5■■□□□ 1.51
NPAS3-201ENST00000346562 OR6J1Q8NGC5 347 aa24.5■■□□□ 1.51
NPAS3-201ENST00000346562 TMEM106CQ9BVX2 250 aa24.5■■□□□ 1.51
NPAS3-201ENST00000346562 GUCY2CP25092 1073 aa24.5■■□□□ 1.51
NPAS3-201ENST00000346562 PMS2P54278 862 aa24.5■■□□□ 1.51
NPAS3-201ENST00000346562 RHOT1Q8IXI2 618 aa24.5■■□□□ 1.51
NPAS3-201ENST00000346562 DHX35Q9H5Z1 703 aaKnown RBP24.5■■□□□ 1.51
NPAS3-201ENST00000346562 KCNJ6P48051 423 aa24.5■■□□□ 1.51
NPAS3-201ENST00000346562 ASAP3Q8TDY4 903 aa24.5■■□□□ 1.51
NPAS3-201ENST00000346562 CPDO75976 1380 aa24.5■■□□□ 1.51
NPAS3-201ENST00000346562 CCDC195A0A1B0GUA6 201 aa24.5■■□□□ 1.51
NPAS3-201ENST00000346562 KITP10721 976 aa24.5■■□□□ 1.51
NPAS3-201ENST00000346562 GFPT1Q06210 699 aaPredicted RBP24.5■■□□□ 1.51
NPAS3-201ENST00000346562 PRDM5Q9NQX1 630 aaPredicted RBP24.5■■□□□ 1.51
NPAS3-201ENST00000346562 PARVAQ9NVD7 372 aa24.5■■□□□ 1.51
NPAS3-201ENST00000346562 BARHL2Q9NY43 387 aa24.5■■□□□ 1.51
NPAS3-201ENST00000346562 OCA2Q04671 838 aa24.5■■□□□ 1.51
NPAS3-201ENST00000346562 RMDN1Q96DB5 314 aa24.5■■□□□ 1.51
NPAS3-201ENST00000346562 ELAC2Q9BQ52 826 aaKnown RBP24.5■■□□□ 1.51
NPAS3-201ENST00000346562 RPAP3Q9H6T3 665 aaPredicted RBP24.5■■□□□ 1.51
NPAS3-201ENST00000346562 ANO9A1A5B4 782 aa24.49■■□□□ 1.51
NPAS3-201ENST00000346562 TRIM49BA6NDI0 452 aa24.49■■□□□ 1.51
NPAS3-201ENST00000346562 CHRNA3P32297 505 aa24.49■■□□□ 1.51
NPAS3-201ENST00000346562 HIPK4Q8NE63 616 aa24.49■■□□□ 1.51
NPAS3-201ENST00000346562 SNF8Q96H20 258 aa24.49■■□□□ 1.51
NPAS3-201ENST00000346562 PLEKHA5Q9HAU0 1116 aa24.49■■□□□ 1.51
NPAS3-201ENST00000346562 HERC5Q9UII4 1024 aaKnown RBP24.49■■□□□ 1.51
NPAS3-201ENST00000346562 GRIK1P39086 918 aa24.49■■□□□ 1.51
NPAS3-201ENST00000346562 PPHLN1Q8NEY8 458 aaKnown RBP24.49■■□□□ 1.51
NPAS3-201ENST00000346562 ALDH1A1P00352 501 aa24.49■■□□□ 1.51
NPAS3-201ENST00000346562 PPM1NQ8N819 430 aa24.49■■□□□ 1.51
NPAS3-201ENST00000346562 DCP1AQ9NPI6 582 aaPredicted RBP24.49■■□□□ 1.51
NPAS3-201ENST00000346562 LSM7Q9UK45 103 aaKnown RBP24.49■■□□□ 1.51
NPAS3-201ENST00000346562 GTPBP10A4D1E9 387 aaKnown RBP24.49■■□□□ 1.51
NPAS3-201ENST00000346562 KIAA0391O15091 583 aaKnown RBP24.49■■□□□ 1.51
NPAS3-201ENST00000346562 GGPS1O95749 300 aa24.49■■□□□ 1.51
NPAS3-201ENST00000346562 MYCBPQ99417 103 aaPredicted RBP24.49■■□□□ 1.51
NPAS3-201ENST00000346562 AGO2Q9UKV8 859 aaKnown RBP24.49■■□□□ 1.51
NPAS3-201ENST00000346562 SYNDIG1LA6NDD5 238 aa24.48■■□□□ 1.51
NPAS3-201ENST00000346562 EIF2AK3Q9NZJ5 1116 aaKnown RBP24.48■■□□□ 1.51
NPAS3-201ENST00000346562 RFX7Q2KHR2 1363 aa24.48■■□□□ 1.51
NPAS3-201ENST00000346562 ARHGAP31Q2M1Z3 1444 aa24.48■■□□□ 1.51
NPAS3-201ENST00000346562 DDX53Q86TM3 631 aaKnown RBP24.48■■□□□ 1.51
NPAS3-201ENST00000346562 ARHGEF1Q92888 912 aaKnown RBP24.48■■□□□ 1.51
NPAS3-201ENST00000346562 AFF2P51816 1311 aa24.48■■□□□ 1.51
NPAS3-201ENST00000346562 AP3B1O00203 1094 aa24.48■■□□□ 1.51
NPAS3-201ENST00000346562 KRT14P02533 472 aa24.48■■□□□ 1.51
NPAS3-201ENST00000346562 DUOXA2Q1HG44 320 aa24.48■■□□□ 1.51
NPAS3-201ENST00000346562 CYB5R4Q7L1T6 521 aa24.48■■□□□ 1.51
NPAS3-201ENST00000346562 TIPINQ9BVW5 301 aa24.48■■□□□ 1.51
NPAS3-201ENST00000346562 KATNAL1Q9BW62 490 aa24.48■■□□□ 1.51
NPAS3-201ENST00000346562 PCDHGB4Q9UN71 923 aa24.48■■□□□ 1.51
NPAS3-201ENST00000346562 LCP1P13796 627 aa24.48■■□□□ 1.51
NPAS3-201ENST00000346562 DRAP1Q14919 205 aaPredicted RBP24.48■■□□□ 1.51
NPAS3-201ENST00000346562 MAPRE2Q15555 327 aa24.48■■□□□ 1.51
NPAS3-201ENST00000346562 SYTL3Q4VX76 610 aa24.48■■□□□ 1.51
NPAS3-201ENST00000346562 PGBD4Q96DM1 585 aa24.48■■□□□ 1.51
NPAS3-201ENST00000346562 MAGI2Q86UL8 1455 aa24.48■■□□□ 1.51
NPAS3-201ENST00000346562 KBTBD13C9JR72 458 aa24.48■■□□□ 1.51
NPAS3-201ENST00000346562 F5H423 210 aaPredicted RBP24.48■■□□□ 1.51
NPAS3-201ENST00000346562 TNPO2O14787 897 aaKnown RBP24.48■■□□□ 1.51
NPAS3-201ENST00000346562 USP11P51784 963 aa24.48■■□□□ 1.51
NPAS3-201ENST00000346562 SAAL1Q96ER3 474 aa24.48■■□□□ 1.51
NPAS3-201ENST00000346562 EIF2AK1Q9BQI3 630 aaKnown RBP24.48■■□□□ 1.51
NPAS3-201ENST00000346562 SPATS2LQ9NUQ6 558 aaKnown RBP24.48■■□□□ 1.51
NPAS3-201ENST00000346562 HSD17B4P51659 736 aa24.47■■□□□ 1.51
NPAS3-201ENST00000346562 ST8SIA6P61647 398 aa24.47■■□□□ 1.51
NPAS3-201ENST00000346562 QRICH1Q2TAL8 776 aa24.47■■□□□ 1.51
NPAS3-201ENST00000346562 HIBCHQ6NVY1 386 aaPredicted RBP24.47■■□□□ 1.51
NPAS3-201ENST00000346562 ENAHQ8N8S7 591 aaPredicted RBP24.47■■□□□ 1.51
NPAS3-201ENST00000346562 SFMBT1Q9UHJ3 866 aa24.47■■□□□ 1.51
NPAS3-201ENST00000346562 POTEFA5A3E0 1075 aa24.47■■□□□ 1.51
NPAS3-201ENST00000346562 POTEIP0CG38 1075 aa24.47■■□□□ 1.51
NPAS3-201ENST00000346562 GPS1Q13098 491 aa24.47■■□□□ 1.51
NPAS3-201ENST00000346562 SNX17Q15036 470 aa24.47■■□□□ 1.51
NPAS3-201ENST00000346562 POTEGQ6S5H5 508 aa24.47■■□□□ 1.51
NPAS3-201ENST00000346562 POTEEQ6S8J3 1075 aa24.47■■□□□ 1.51
NPAS3-201ENST00000346562 SEPT8Q92599 483 aa24.47■■□□□ 1.51
NPAS3-201ENST00000346562 SIK2Q9H0K1 926 aa24.47■■□□□ 1.51
NPAS3-201ENST00000346562 FAM196BA6NMK8 535 aa24.47■■□□□ 1.51
NPAS3-201ENST00000346562 PIK3R2O00459 728 aa24.47■■□□□ 1.51
NPAS3-201ENST00000346562 VCPP55072 806 aaKnown RBP24.47■■□□□ 1.51
NPAS3-201ENST00000346562 PCDHA10Q9Y5I2 948 aa24.47■■□□□ 1.51
NPAS3-201ENST00000346562 F5H6K3 240 aa24.47■■□□□ 1.51
NPAS3-201ENST00000346562 KLRC3Q07444 240 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms