RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 FGFR1P11362 822 aa22.86■■□□□ 1.25
SMARCB1-202ENST00000344921 SCP2P22307 547 aa22.86■■□□□ 1.25
SMARCB1-202ENST00000344921 ABCD1P33897 745 aa22.86■■□□□ 1.25
SMARCB1-202ENST00000344921 BTG3Q14201 252 aaPredicted RBP22.86■■□□□ 1.25
SMARCB1-202ENST00000344921 PAN2Q504Q3 1202 aaKnown RBP22.86■■□□□ 1.25
SMARCB1-202ENST00000344921 ZNF697Q5TEC3 545 aa22.86■■□□□ 1.25
SMARCB1-202ENST00000344921 TMEM87AQ8NBN3 555 aa22.86■■□□□ 1.25
SMARCB1-202ENST00000344921 LPPQ93052 612 aa22.86■■□□□ 1.25
SMARCB1-202ENST00000344921 TCHPQ9BT92 498 aa22.86■■□□□ 1.25
SMARCB1-202ENST00000344921 TARS2Q9BW92 718 aaKnown RBP22.86■■□□□ 1.25
SMARCB1-202ENST00000344921 PDZD7Q9H5P4 517 aa22.86■■□□□ 1.25
SMARCB1-202ENST00000344921 FRMD3A2A2Y4 597 aa22.85■■□□□ 1.25
SMARCB1-202ENST00000344921 ZNF623O75123 536 aa22.85■■□□□ 1.25
SMARCB1-202ENST00000344921 PRPF40AO75400 957 aaKnown RBP22.85■■□□□ 1.25
SMARCB1-202ENST00000344921 GCNT3O95395 438 aa22.85■■□□□ 1.25
SMARCB1-202ENST00000344921 GATMP50440 423 aa22.85■■□□□ 1.25
SMARCB1-202ENST00000344921 FAM160A1Q05DH4 1040 aa22.85■■□□□ 1.25
SMARCB1-202ENST00000344921 COASYQ13057 564 aa22.85■■□□□ 1.25
SMARCB1-202ENST00000344921 ZC2HC1CQ53FD0 456 aaPredicted RBP22.85■■□□□ 1.25
SMARCB1-202ENST00000344921 ZNF720Q7Z2F6 126 aa22.85■■□□□ 1.25
SMARCB1-202ENST00000344921 FIZ1Q96SL8 496 aa22.85■■□□□ 1.25
SMARCB1-202ENST00000344921 ACO2Q99798 780 aaKnown RBP22.85■■□□□ 1.25
SMARCB1-202ENST00000344921 TBX20Q9UMR3 447 aa22.85■■□□□ 1.25
SMARCB1-202ENST00000344921 IPPQ9Y573 584 aa22.85■■□□□ 1.25
SMARCB1-202ENST00000344921 TBKBP1A7MCY6 615 aa22.85■■□□□ 1.25
SMARCB1-202ENST00000344921 ATF7P17544 494 aaPredicted RBP22.85■■□□□ 1.25
SMARCB1-202ENST00000344921 KANK3Q6NY19 840 aa22.85■■□□□ 1.25
SMARCB1-202ENST00000344921 CNNM4Q6P4Q7 775 aa22.85■■□□□ 1.25
SMARCB1-202ENST00000344921 APBB1IPQ7Z5R6 666 aaPredicted RBP22.85■■□□□ 1.25
SMARCB1-202ENST00000344921 ZNF598Q86UK7 904 aaKnown RBP22.85■■□□□ 1.25
SMARCB1-202ENST00000344921 HACE1Q8IYU2 909 aa22.85■■□□□ 1.25
SMARCB1-202ENST00000344921 FMR1NBQ8N0W7 255 aaPredicted RBP22.85■■□□□ 1.25
SMARCB1-202ENST00000344921 ZNF689Q96CS4 500 aaPredicted RBP22.85■■□□□ 1.25
SMARCB1-202ENST00000344921 APOL6Q9BWW8 343 aa22.85■■□□□ 1.25
SMARCB1-202ENST00000344921 OLFML3Q9NRN5 406 aa22.85■■□□□ 1.25
SMARCB1-202ENST00000344921 ITGA4P13612 1032 aa22.84■■□□□ 1.25
SMARCB1-202ENST00000344921 MATR3P43243 847 aaKnown RBP eCLIP22.84■■□□□ 1.255e-9■■■■□ 20.1
SMARCB1-202ENST00000344921 GTF2BQ00403 316 aa22.84■■□□□ 1.25
SMARCB1-202ENST00000344921 EEF1DP3Q658K8 133 aa22.84■■□□□ 1.25
SMARCB1-202ENST00000344921 UNC13DQ70J99 1090 aa22.84■■□□□ 1.25
SMARCB1-202ENST00000344921 FIBCD1Q8N539 461 aa22.84■■□□□ 1.25
SMARCB1-202ENST00000344921 HELQQ8TDG4 1101 aa22.84■■□□□ 1.25
SMARCB1-202ENST00000344921 GBP4Q96PP9 640 aa22.84■■□□□ 1.25
SMARCB1-202ENST00000344921 ZNF576Q9H609 170 aa22.84■■□□□ 1.25
SMARCB1-202ENST00000344921 TNFSF13BQ9Y275 285 aa22.84■■□□□ 1.25
SMARCB1-202ENST00000344921 HES2Q9Y543 173 aa22.84■■□□□ 1.25
SMARCB1-202ENST00000344921 GTPBP6O43824 516 aaPredicted RBP22.83■■□□□ 1.25
SMARCB1-202ENST00000344921 MYL1P05976 194 aa22.83■■□□□ 1.25
SMARCB1-202ENST00000344921 LIG4P49917 911 aa22.83■■□□□ 1.25
SMARCB1-202ENST00000344921 SNW1Q13573 536 aaKnown RBP22.83■■□□□ 1.25
SMARCB1-202ENST00000344921 SMG8Q8ND04 991 aaKnown RBP22.83■■□□□ 1.25
SMARCB1-202ENST00000344921 FAM161BQ96MY7 647 aa22.83■■□□□ 1.25
SMARCB1-202ENST00000344921 NXF3Q9H4D5 531 aaKnown RBP22.83■■□□□ 1.25
SMARCB1-202ENST00000344921 PCDHB13Q9Y5F0 798 aa22.83■■□□□ 1.25
SMARCB1-202ENST00000344921 PVALEFA0A1B0GWK0 134 aa22.82■■□□□ 1.24
SMARCB1-202ENST00000344921 MEIS3P2A8K0S8 358 aa22.82■■□□□ 1.24
SMARCB1-202ENST00000344921 HNRNPDLO14979 420 aaKnown RBP22.82■■□□□ 1.24
SMARCB1-202ENST00000344921 UBE2HP62256 183 aa22.82■■□□□ 1.24
SMARCB1-202ENST00000344921 DCAF4L1Q3SXM0 396 aa22.82■■□□□ 1.24
SMARCB1-202ENST00000344921 ZNF568Q3ZCX4 644 aa22.82■■□□□ 1.24
SMARCB1-202ENST00000344921 GPR153Q6NV75 609 aa22.82■■□□□ 1.24
SMARCB1-202ENST00000344921 MRPL10Q7Z7H8 261 aaKnown RBP22.82■■□□□ 1.24
SMARCB1-202ENST00000344921 ZBTB33Q86T24 672 aa22.82■■□□□ 1.24
SMARCB1-202ENST00000344921 ENGASEQ8NFI3 743 aa22.82■■□□□ 1.24
SMARCB1-202ENST00000344921 HPS3Q969F9 1004 aa22.82■■□□□ 1.24
SMARCB1-202ENST00000344921 TMEM117Q9H0C3 514 aa22.82■■□□□ 1.24
SMARCB1-202ENST00000344921 ST6GALNAC4Q9H4F1 302 aa22.82■■□□□ 1.24
SMARCB1-202ENST00000344921 RC3H2Q9HBD1 1191 aaKnown RBP22.82■■□□□ 1.24
SMARCB1-202ENST00000344921 ANKFY1Q9P2R3 1169 aa22.82■■□□□ 1.24
SMARCB1-202ENST00000344921 MTUS1Q9ULD2 1270 aa22.82■■□□□ 1.24
SMARCB1-202ENST00000344921 SZT2Q5T011 3432 aa22.82■■□□□ 1.24
SMARCB1-202ENST00000344921 LINC01553A4QN01 128 aa22.82■■□□□ 1.24
SMARCB1-202ENST00000344921 NR1I2O75469 434 aa22.82■■□□□ 1.24
SMARCB1-202ENST00000344921 TAP1Q03518 808 aa22.82■■□□□ 1.24
SMARCB1-202ENST00000344921 SPOUT1Q5T280 376 aaKnown RBP22.82■■□□□ 1.24
SMARCB1-202ENST00000344921 GLB1LQ6UWU2 654 aa22.82■■□□□ 1.24
SMARCB1-202ENST00000344921 ZPBP2Q6X784 338 aa22.82■■□□□ 1.24
SMARCB1-202ENST00000344921 STXBP4Q6ZWJ1 553 aa22.82■■□□□ 1.24
SMARCB1-202ENST00000344921 CMTR2Q8IYT2 770 aaKnown RBP22.82■■□□□ 1.24
SMARCB1-202ENST00000344921 SP7Q8TDD2 431 aaPredicted RBP22.82■■□□□ 1.24
SMARCB1-202ENST00000344921 CERS4Q9HA82 394 aa22.82■■□□□ 1.24
SMARCB1-202ENST00000344921 RSAD1Q9HA92 442 aa22.82■■□□□ 1.24
SMARCB1-202ENST00000344921 PARP2Q9UGN5 583 aa22.82■■□□□ 1.24
SMARCB1-202ENST00000344921 INPP5FQ9Y2H2 1132 aa22.82■■□□□ 1.24
SMARCB1-202ENST00000344921 TMEM265A0A087WTH1 108 aa22.81■■□□□ 1.24
SMARCB1-202ENST00000344921 KINO60870 393 aaKnown RBP22.81■■□□□ 1.24
SMARCB1-202ENST00000344921 TOM1L1O75674 476 aa22.81■■□□□ 1.24
SMARCB1-202ENST00000344921 ARHGEF15O94989 841 aa22.81■■□□□ 1.24
SMARCB1-202ENST00000344921 MYBP10242 640 aa22.81■■□□□ 1.24
SMARCB1-202ENST00000344921 HARSP12081 509 aaKnown RBP22.81■■□□□ 1.24
SMARCB1-202ENST00000344921 ALCAMQ13740 583 aa22.81■■□□□ 1.24
SMARCB1-202ENST00000344921 CLLU1OSQ5K130 101 aa22.81■■□□□ 1.24
SMARCB1-202ENST00000344921 FAM26FQ5R3K3 315 aa22.81■■□□□ 1.24
SMARCB1-202ENST00000344921 MPZL3Q6UWV2 235 aa22.81■■□□□ 1.24
SMARCB1-202ENST00000344921 AGMOQ6ZNB7 445 aa22.81■■□□□ 1.24
SMARCB1-202ENST00000344921 CLEC17AQ6ZS10 378 aa22.81■■□□□ 1.24
SMARCB1-202ENST00000344921 MAP4K3Q8IVH8 894 aa22.81■■□□□ 1.24
SMARCB1-202ENST00000344921 KCNN1Q92952 543 aa22.81■■□□□ 1.24
SMARCB1-202ENST00000344921 CCDC47Q96A33 483 aaKnown RBP22.81■■□□□ 1.24
SMARCB1-202ENST00000344921 ZBTB45Q96K62 511 aaPredicted RBP22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms