RNA–Protein interactions for RNA: ENST00000344791.6

LYSMD4-202, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LYSMD4, Length 2,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-202ENST00000344791 SLC20A2Q08357 652 aa20.61■□□□□ 0.89
LYSMD4-202ENST00000344791 B3GNT9Q6UX72 402 aa20.61■□□□□ 0.89
LYSMD4-202ENST00000344791 RIT2Q99578 217 aa20.61■□□□□ 0.89
LYSMD4-202ENST00000344791 FEM1BQ9UK73 627 aa20.61■□□□□ 0.89
LYSMD4-202ENST00000344791 PLS3P13797 630 aa20.6■□□□□ 0.89
LYSMD4-202ENST00000344791 VCAM1P19320 739 aa20.6■□□□□ 0.89
LYSMD4-202ENST00000344791 FGFR4P22455 802 aa20.6■□□□□ 0.89
LYSMD4-202ENST00000344791 SSTR3P32745 418 aaPredicted RBP20.6■□□□□ 0.89
LYSMD4-202ENST00000344791 GPC5P78333 572 aa20.6■□□□□ 0.89
LYSMD4-202ENST00000344791 QPCTQ16769 361 aa20.6■□□□□ 0.89
LYSMD4-202ENST00000344791 LRIG3Q6UXM1 1119 aa20.6■□□□□ 0.89
LYSMD4-202ENST00000344791 RUFY4Q6ZNE9 571 aa20.6■□□□□ 0.89
LYSMD4-202ENST00000344791 B4GALNT4Q76KP1 1039 aa20.6■□□□□ 0.89
LYSMD4-202ENST00000344791 KREMEN1Q96MU8 473 aa20.6■□□□□ 0.89
LYSMD4-202ENST00000344791 CCDC113Q9H0I3 377 aa20.6■□□□□ 0.89
LYSMD4-202ENST00000344791 KCND2Q9NZV8 630 aa20.6■□□□□ 0.89
LYSMD4-202ENST00000344791 MTMR3Q13615 1198 aa20.6■□□□□ 0.89
LYSMD4-202ENST00000344791 NFIL3Q16649 462 aa20.6■□□□□ 0.89
LYSMD4-202ENST00000344791 DAB2IPQ5VWQ8 1189 aa20.6■□□□□ 0.89
LYSMD4-202ENST00000344791 TTC27Q6P3X3 843 aa20.6■□□□□ 0.89
LYSMD4-202ENST00000344791 FAM160B2Q86V87 743 aa20.6■□□□□ 0.89
LYSMD4-202ENST00000344791 EPS8L1Q8TE68 723 aa20.6■□□□□ 0.89
LYSMD4-202ENST00000344791 SELENOSQ9BQE4 189 aa20.6■□□□□ 0.89
LYSMD4-202ENST00000344791 STRA6Q9BX79 667 aa20.6■□□□□ 0.89
LYSMD4-202ENST00000344791 TMEM206Q9H813 350 aa20.6■□□□□ 0.89
LYSMD4-202ENST00000344791 RPS6P62753 249 aaKnown RBP20.6■□□□□ 0.89
LYSMD4-202ENST00000344791 RHOT2Q8IXI1 618 aa20.6■□□□□ 0.89
LYSMD4-202ENST00000344791 CCDC105Q8IYK2 499 aa20.6■□□□□ 0.89
LYSMD4-202ENST00000344791 UBL4BQ8N7F7 174 aa20.6■□□□□ 0.89
LYSMD4-202ENST00000344791 ZNF653Q96CK0 615 aa20.6■□□□□ 0.89
LYSMD4-202ENST00000344791 NUP85Q9BW27 656 aa20.6■□□□□ 0.89
LYSMD4-202ENST00000344791 AGO4Q9HCK5 861 aaKnown RBP20.6■□□□□ 0.89
LYSMD4-202ENST00000344791 UBE4BO95155 1302 aa20.59■□□□□ 0.89
LYSMD4-202ENST00000344791 KIF13BQ9NQT8 1826 aa20.59■□□□□ 0.89
LYSMD4-202ENST00000344791 PHF20L1A8MW92 1017 aa20.59■□□□□ 0.89
LYSMD4-202ENST00000344791 ICAM1P05362 532 aa20.59■□□□□ 0.89
LYSMD4-202ENST00000344791 PPP2R2AP63151 447 aa20.59■□□□□ 0.89
LYSMD4-202ENST00000344791 SNX1Q13596 522 aa20.59■□□□□ 0.89
LYSMD4-202ENST00000344791 SNRNP35Q16560 246 aaKnown RBP20.59■□□□□ 0.89
LYSMD4-202ENST00000344791 LLGL2Q6P1M3 1020 aa20.59■□□□□ 0.89
LYSMD4-202ENST00000344791 ARFGAP2Q8N6H7 521 aa20.59■□□□□ 0.89
LYSMD4-202ENST00000344791 PRELID2Q8N945 189 aa20.59■□□□□ 0.89
LYSMD4-202ENST00000344791 DNAJC17Q9NVM6 304 aaKnown RBP20.59■□□□□ 0.89
LYSMD4-202ENST00000344791 TELO2Q9Y4R8 837 aa20.59■□□□□ 0.89
LYSMD4-202ENST00000344791 KRT5P13647 590 aa20.59■□□□□ 0.89
LYSMD4-202ENST00000344791 SLC29A2Q14542 456 aa20.59■□□□□ 0.89
LYSMD4-202ENST00000344791 CCDC137Q6PK04 289 aaKnown RBP20.59■□□□□ 0.89
LYSMD4-202ENST00000344791 CYFIP2Q96F07 1278 aa20.59■□□□□ 0.89
LYSMD4-202ENST00000344791 SLC12A6Q9UHW9 1150 aa20.59■□□□□ 0.89
LYSMD4-202ENST00000344791 TRPC6Q9Y210 931 aa20.59■□□□□ 0.89
LYSMD4-202ENST00000344791 CTDP1Q9Y5B0 961 aaPredicted RBP20.59■□□□□ 0.89
LYSMD4-202ENST00000344791 ASTN2O75129 1339 aaPredicted RBP20.58■□□□□ 0.89
LYSMD4-202ENST00000344791 CHRNB2P17787 502 aa20.58■□□□□ 0.89
LYSMD4-202ENST00000344791 ADSSP30520 456 aa20.58■□□□□ 0.89
LYSMD4-202ENST00000344791 RPL21P46778 160 aaKnown RBP20.58■□□□□ 0.89
LYSMD4-202ENST00000344791 SPDYE2Q495Y8 402 aa20.58■□□□□ 0.89
LYSMD4-202ENST00000344791 SLC9A9Q8IVB4 645 aa20.58■□□□□ 0.89
LYSMD4-202ENST00000344791 FLAD1Q8NFF5 587 aa20.58■□□□□ 0.89
LYSMD4-202ENST00000344791 TAS1R2Q8TE23 839 aa20.58■□□□□ 0.89
LYSMD4-202ENST00000344791 CLEC4DQ8WXI8 215 aa20.58■□□□□ 0.89
LYSMD4-202ENST00000344791 ZSWIM1Q9BR11 485 aa20.58■□□□□ 0.89
LYSMD4-202ENST00000344791 SEMA4AQ9H3S1 761 aa20.58■□□□□ 0.89
LYSMD4-202ENST00000344791 MEFVO15553 781 aaPredicted RBP20.58■□□□□ 0.88
LYSMD4-202ENST00000344791 RASA3Q14644 834 aa20.58■□□□□ 0.88
LYSMD4-202ENST00000344791 SEL1L2Q5TEA6 688 aa20.58■□□□□ 0.88
LYSMD4-202ENST00000344791 DUPD1Q68J44 220 aa20.58■□□□□ 0.88
LYSMD4-202ENST00000344791 ZNF564Q8TBZ8 553 aaPredicted RBP20.58■□□□□ 0.88
LYSMD4-202ENST00000344791 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.58■□□□□ 0.88
LYSMD4-202ENST00000344791 NAP1L3Q99457 506 aaPredicted RBP20.58■□□□□ 0.88
LYSMD4-202ENST00000344791 FZD1Q9UP38 647 aa20.58■□□□□ 0.88
LYSMD4-202ENST00000344791 FAM107AO95990 144 aa20.57■□□□□ 0.88
LYSMD4-202ENST00000344791 PMS2P54278 862 aa20.57■□□□□ 0.88
LYSMD4-202ENST00000344791 SYTL5Q8TDW5 730 aaPredicted RBP20.57■□□□□ 0.88
LYSMD4-202ENST00000344791 TRIM7Q9C029 511 aa20.57■□□□□ 0.88
LYSMD4-202ENST00000344791 DENND3A2RUS2 1198 aa20.57■□□□□ 0.88
LYSMD4-202ENST00000344791 A6NNZ2 444 aa20.57■□□□□ 0.88
LYSMD4-202ENST00000344791 HSD17B4P51659 736 aa20.57■□□□□ 0.88
LYSMD4-202ENST00000344791 TRIP13Q15645 432 aaPredicted RBP20.57■□□□□ 0.88
LYSMD4-202ENST00000344791 TUBB8Q3ZCM7 444 aa20.57■□□□□ 0.88
LYSMD4-202ENST00000344791 CCDC38Q502W7 563 aa20.57■□□□□ 0.88
LYSMD4-202ENST00000344791 KCTD17Q8N5Z5 321 aa20.57■□□□□ 0.88
LYSMD4-202ENST00000344791 RAPGEF5Q92565 580 aa20.57■□□□□ 0.88
LYSMD4-202ENST00000344791 WNK4Q96J92 1243 aa20.57■□□□□ 0.88
LYSMD4-202ENST00000344791 RMDN3Q96TC7 470 aa20.57■□□□□ 0.88
LYSMD4-202ENST00000344791 PSMD1Q99460 953 aa20.57■□□□□ 0.88
LYSMD4-202ENST00000344791 GMNCA6NCL1 334 aa20.56■□□□□ 0.88
LYSMD4-202ENST00000344791 KIAA0391O15091 583 aaKnown RBP20.56■□□□□ 0.88
LYSMD4-202ENST00000344791 PLSCR1O15162 318 aa20.56■□□□□ 0.88
LYSMD4-202ENST00000344791 CCNE2O96020 404 aa20.56■□□□□ 0.88
LYSMD4-202ENST00000344791 PTGER2P43116 358 aa20.56■□□□□ 0.88
LYSMD4-202ENST00000344791 C1orf54Q8WWF1 131 aa20.56■□□□□ 0.88
LYSMD4-202ENST00000344791 TATDN2Q93075 761 aa20.56■□□□□ 0.88
LYSMD4-202ENST00000344791 RNF25Q96BH1 459 aaPredicted RBP20.56■□□□□ 0.88
LYSMD4-202ENST00000344791 FAM118BQ9BPY3 351 aa20.56■□□□□ 0.88
LYSMD4-202ENST00000344791 ZDHHC18Q9NUE0 388 aa20.56■□□□□ 0.88
LYSMD4-202ENST00000344791 RTN2O75298 545 aa20.56■□□□□ 0.88
LYSMD4-202ENST00000344791 ASNSP08243 561 aa20.56■□□□□ 0.88
LYSMD4-202ENST00000344791 CNGA1P29973 690 aa20.56■□□□□ 0.88
LYSMD4-202ENST00000344791 BIRC3Q13489 604 aa20.56■□□□□ 0.88
LYSMD4-202ENST00000344791 DENND2CQ68D51 928 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms