RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 UBA7P41226 1012 aa17.74■□□□□ 0.43
ATG4B-201ENST00000344376 DMP1Q13316 513 aaPredicted RBP17.74■□□□□ 0.43
ATG4B-201ENST00000344376 ADAM15Q13444 863 aa17.74■□□□□ 0.43
ATG4B-201ENST00000344376 SMC1AQ14683 1233 aaKnown RBP17.74■□□□□ 0.43
ATG4B-201ENST00000344376 SF3A1Q15459 793 aaKnown RBP17.74■□□□□ 0.43
ATG4B-201ENST00000344376 CABP7Q86V35 215 aa17.74■□□□□ 0.43
ATG4B-201ENST00000344376 CALML4Q96GE6 196 aa17.74■□□□□ 0.43
ATG4B-201ENST00000344376 NECAB3Q96P71 396 aaPredicted RBP17.74■□□□□ 0.43
ATG4B-201ENST00000344376 ADPGKQ9BRR6 497 aa17.74■□□□□ 0.43
ATG4B-201ENST00000344376 TMEM175Q9BSA9 504 aa17.74■□□□□ 0.43
ATG4B-201ENST00000344376 FOXD4L1Q9NU39 408 aa17.74■□□□□ 0.43
ATG4B-201ENST00000344376 STK39Q9UEW8 545 aa17.74■□□□□ 0.43
ATG4B-201ENST00000344376 GIT1Q9Y2X7 761 aa17.74■□□□□ 0.43
ATG4B-201ENST00000344376 HES2Q9Y543 173 aa17.74■□□□□ 0.43
ATG4B-201ENST00000344376 PLXNA4Q9HCM2 1894 aa17.74■□□□□ 0.43
ATG4B-201ENST00000344376 TTC28Q96AY4 2481 aa17.74■□□□□ 0.43
ATG4B-201ENST00000344376 ZMYM2Q9UBW7 1377 aa17.73■□□□□ 0.43
ATG4B-201ENST00000344376 ACKR2O00590 384 aa17.73■□□□□ 0.43
ATG4B-201ENST00000344376 HIP1RO75146 1068 aa17.73■□□□□ 0.43
ATG4B-201ENST00000344376 POMCP01189 267 aa17.73■□□□□ 0.43
ATG4B-201ENST00000344376 GALTP07902 379 aa17.73■□□□□ 0.43
ATG4B-201ENST00000344376 LONP1P36776 959 aaKnown RBP17.73■□□□□ 0.43
ATG4B-201ENST00000344376 MLH1P40692 756 aa17.73■□□□□ 0.43
ATG4B-201ENST00000344376 RINT1Q6NUQ1 792 aa17.73■□□□□ 0.43
ATG4B-201ENST00000344376 APBB1IPQ7Z5R6 666 aaPredicted RBP17.73■□□□□ 0.43
ATG4B-201ENST00000344376 CDR2LQ86X02 465 aaPredicted RBP17.73■□□□□ 0.43
ATG4B-201ENST00000344376 HSCBQ8IWL3 235 aa17.73■□□□□ 0.43
ATG4B-201ENST00000344376 RASSF8Q8NHQ8 419 aa17.73■□□□□ 0.43
ATG4B-201ENST00000344376 SNX21Q969T3 373 aa17.73■□□□□ 0.43
ATG4B-201ENST00000344376 IGSF21Q96ID5 467 aa17.73■□□□□ 0.43
ATG4B-201ENST00000344376 GAD1Q99259 594 aa17.73■□□□□ 0.43
ATG4B-201ENST00000344376 RUSC1Q9BVN2 902 aa17.73■□□□□ 0.43
ATG4B-201ENST00000344376 CCDC113Q9H0I3 377 aa17.73■□□□□ 0.43
ATG4B-201ENST00000344376 NXF3Q9H4D5 531 aaKnown RBP17.73■□□□□ 0.43
ATG4B-201ENST00000344376 ATG2AQ2TAZ0 1938 aa17.72■□□□□ 0.43
ATG4B-201ENST00000344376 GRXCR2A6NFK2 248 aa17.72■□□□□ 0.43
ATG4B-201ENST00000344376 ARL5CA6NH57 179 aa17.72■□□□□ 0.43
ATG4B-201ENST00000344376 CCDC169A6NNP5 214 aa17.72■□□□□ 0.43
ATG4B-201ENST00000344376 INPPL1O15357 1258 aa17.72■□□□□ 0.43
ATG4B-201ENST00000344376 LINC01565O15544 149 aa17.72■□□□□ 0.43
ATG4B-201ENST00000344376 TBX10O75333 385 aa17.72■□□□□ 0.43
ATG4B-201ENST00000344376 NR1I2O75469 434 aa17.72■□□□□ 0.43
ATG4B-201ENST00000344376 CA8P35219 290 aa17.72■□□□□ 0.43
ATG4B-201ENST00000344376 LTBRP36941 435 aa17.72■□□□□ 0.43
ATG4B-201ENST00000344376 SLC11A1P49279 550 aa17.72■□□□□ 0.43
ATG4B-201ENST00000344376 DUSP6Q16828 381 aa17.72■□□□□ 0.43
ATG4B-201ENST00000344376 KCNK18Q7Z418 384 aa17.72■□□□□ 0.43
ATG4B-201ENST00000344376 ZNF280BQ86YH2 543 aa17.72■□□□□ 0.43
ATG4B-201ENST00000344376 PNMA5Q96PV4 448 aa17.72■□□□□ 0.43
ATG4B-201ENST00000344376 PLIN2Q99541 437 aa17.72■□□□□ 0.43
ATG4B-201ENST00000344376 KIFC3Q9BVG8 833 aa17.72■□□□□ 0.43
ATG4B-201ENST00000344376 RNF39Q9H2S5 420 aa17.72■□□□□ 0.43
ATG4B-201ENST00000344376 C17orf75Q9HAS0 396 aa17.72■□□□□ 0.43
ATG4B-201ENST00000344376 POLD4Q9HCU8 107 aa17.72■□□□□ 0.43
ATG4B-201ENST00000344376 KCND2Q9NZV8 630 aa17.72■□□□□ 0.43
ATG4B-201ENST00000344376 DNAJB4Q9UDY4 337 aa17.72■□□□□ 0.43
ATG4B-201ENST00000344376 PARP2Q9UGN5 583 aa17.72■□□□□ 0.43
ATG4B-201ENST00000344376 KCNG1Q9UIX4 513 aa17.72■□□□□ 0.43
ATG4B-201ENST00000344376 CD207Q9UJ71 328 aa17.72■□□□□ 0.43
ATG4B-201ENST00000344376 BRWD1Q9NSI6 2320 aa17.71■□□□□ 0.43
ATG4B-201ENST00000344376 PER2O15055 1255 aa17.71■□□□□ 0.43
ATG4B-201ENST00000344376 ALDH2P05091 517 aa17.71■□□□□ 0.43
ATG4B-201ENST00000344376 GUCY2CP25092 1073 aa17.71■□□□□ 0.43
ATG4B-201ENST00000344376 PEX3P56589 373 aa17.71■□□□□ 0.43
ATG4B-201ENST00000344376 CLUL1Q15846 466 aa17.71■□□□□ 0.43
ATG4B-201ENST00000344376 TMEM119Q4V9L6 283 aa17.71■□□□□ 0.43
ATG4B-201ENST00000344376 C1orf186Q6ZWK4 172 aa17.71■□□□□ 0.43
ATG4B-201ENST00000344376 DDX53Q86TM3 631 aaKnown RBP17.71■□□□□ 0.43
ATG4B-201ENST00000344376 SYT2Q8N9I0 419 aaPredicted RBP17.71■□□□□ 0.43
ATG4B-201ENST00000344376 TMEM87AQ8NBN3 555 aa17.71■□□□□ 0.43
ATG4B-201ENST00000344376 RPS6KC1Q96S38 1066 aa17.71■□□□□ 0.43
ATG4B-201ENST00000344376 PDZD7Q9H5P4 517 aa17.71■□□□□ 0.43
ATG4B-201ENST00000344376 FAN1Q9Y2M0 1017 aa17.71■□□□□ 0.43
ATG4B-201ENST00000344376 MYO7AQ13402 2215 aa17.71■□□□□ 0.43
ATG4B-201ENST00000344376 K7ERI5 159 aa17.7■□□□□ 0.42
ATG4B-201ENST00000344376 DDHD2O94830 711 aa17.7■□□□□ 0.42
ATG4B-201ENST00000344376 HSP90AA1P07900 732 aaKnown RBP17.7■□□□□ 0.42
ATG4B-201ENST00000344376 PLA2G4BP0C869 781 aa17.7■□□□□ 0.42
ATG4B-201ENST00000344376 IL9P15248 144 aa17.7■□□□□ 0.42
ATG4B-201ENST00000344376 NPTX2P47972 431 aa17.7■□□□□ 0.42
ATG4B-201ENST00000344376 SCNN1GP51170 649 aa17.7■□□□□ 0.42
ATG4B-201ENST00000344376 AFF1P51825 1210 aaKnown RBP17.7■□□□□ 0.42
ATG4B-201ENST00000344376 DLX2Q07687 328 aaPredicted RBP17.7■□□□□ 0.42
ATG4B-201ENST00000344376 RESTQ13127 1097 aa17.7■□□□□ 0.42
ATG4B-201ENST00000344376 SMAD4Q13485 552 aaKnown RBP17.7■□□□□ 0.42
ATG4B-201ENST00000344376 DCAF4L1Q3SXM0 396 aa17.7■□□□□ 0.42
ATG4B-201ENST00000344376 TMEM173Q86WV6 379 aaPredicted RBP17.7■□□□□ 0.42
ATG4B-201ENST00000344376 VPS52Q8N1B4 723 aa17.7■□□□□ 0.42
ATG4B-201ENST00000344376 ZFP42Q96MM3 310 aa17.7■□□□□ 0.42
ATG4B-201ENST00000344376 ZSCAN16Q9H4T2 348 aaPredicted RBP17.7■□□□□ 0.42
ATG4B-201ENST00000344376 KMT5AQ9NQR1 393 aa17.7■□□□□ 0.42
ATG4B-201ENST00000344376 RBM19Q9Y4C8 960 aaKnown RBP17.7■□□□□ 0.42
ATG4B-201ENST00000344376 HIDE1A8MVS5 230 aa17.7■□□□□ 0.42
ATG4B-201ENST00000344376 STX6O43752 255 aa17.7■□□□□ 0.42
ATG4B-201ENST00000344376 AKAP5P24588 427 aa17.7■□□□□ 0.42
ATG4B-201ENST00000344376 GIT2Q14161 759 aa17.7■□□□□ 0.42
ATG4B-201ENST00000344376 ATF7IP2Q5U623 682 aa17.7■□□□□ 0.42
ATG4B-201ENST00000344376 DAW1Q8N136 415 aa17.7■□□□□ 0.42
ATG4B-201ENST00000344376 MRPL43Q8N983 215 aaKnown RBP17.7■□□□□ 0.42
ATG4B-201ENST00000344376 ZBP1Q9H171 429 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms