RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 SLC18A3Q16572 532 aa8.59□□□□□ -1.03
UBE4B-202ENST00000343090 SLFN12LQ6IEE8 588 aa8.59□□□□□ -1.03
UBE4B-202ENST00000343090 EPM2AIP1Q7L775 607 aaPredicted RBP8.59□□□□□ -1.03
UBE4B-202ENST00000343090 HAUS6Q7Z4H7 955 aa8.59□□□□□ -1.03
UBE4B-202ENST00000343090 FRMD5Q7Z6J6 570 aa8.59□□□□□ -1.03
UBE4B-202ENST00000343090 HIPK4Q8NE63 616 aa8.59□□□□□ -1.03
UBE4B-202ENST00000343090 SLC5A4Q9NY91 659 aa8.59□□□□□ -1.03
UBE4B-202ENST00000343090 CHORDC1Q9UHD1 332 aaPredicted RBP8.59□□□□□ -1.03
UBE4B-202ENST00000343090 COL3A1P02461 1466 aaPredicted RBP8.59□□□□□ -1.03
UBE4B-202ENST00000343090 NRXN1Q9ULB1 1477 aa8.59□□□□□ -1.03
UBE4B-202ENST00000343090 SPDYE16A6NNV3 312 aaPredicted RBP8.59□□□□□ -1.03
UBE4B-202ENST00000343090 EYA4O95677 639 aa8.59□□□□□ -1.03
UBE4B-202ENST00000343090 TFRCP02786 760 aaKnown RBP8.59□□□□□ -1.03
UBE4B-202ENST00000343090 ERVK-24P63145 666 aa8.59□□□□□ -1.03
UBE4B-202ENST00000343090 SUPT20HL1Q3ZLR7 823 aa8.59□□□□□ -1.03
UBE4B-202ENST00000343090 SPDYE2Q495Y8 402 aa8.59□□□□□ -1.03
UBE4B-202ENST00000343090 ZNF667Q5HYK9 610 aa8.59□□□□□ -1.03
UBE4B-202ENST00000343090 MAP3K21Q5TCX8 1036 aa8.59□□□□□ -1.03
UBE4B-202ENST00000343090 OR6B3Q8NGW1 331 aa8.59□□□□□ -1.03
UBE4B-202ENST00000343090 TEKT4Q8WW24 435 aa8.59□□□□□ -1.03
UBE4B-202ENST00000343090 AGPAT1Q99943 283 aa8.59□□□□□ -1.03
UBE4B-202ENST00000343090 POLR3FQ9H1D9 316 aaPredicted RBP8.59□□□□□ -1.03
UBE4B-202ENST00000343090 TBC1D22BQ9NU19 505 aa8.59□□□□□ -1.03
UBE4B-202ENST00000343090 INPP5FQ9Y2H2 1132 aa8.59□□□□□ -1.03
UBE4B-202ENST00000343090 CCT8L1PA6NM43 557 aa8.59□□□□□ -1.04
UBE4B-202ENST00000343090 ESRRAP11474 423 aaPredicted RBP8.59□□□□□ -1.04
UBE4B-202ENST00000343090 UCHL3P15374 230 aa8.59□□□□□ -1.04
UBE4B-202ENST00000343090 GNA15P30679 374 aa8.59□□□□□ -1.04
UBE4B-202ENST00000343090 GALCP54803 685 aa8.59□□□□□ -1.04
UBE4B-202ENST00000343090 PRPSAP1Q14558 356 aa8.59□□□□□ -1.04
UBE4B-202ENST00000343090 ZNF699Q32M78 642 aa8.59□□□□□ -1.04
UBE4B-202ENST00000343090 SYCP2LQ5T4T6 812 aa8.59□□□□□ -1.04
UBE4B-202ENST00000343090 LONP2Q86WA8 852 aa8.59□□□□□ -1.04
UBE4B-202ENST00000343090 LDHDQ86WU2 507 aa8.59□□□□□ -1.04
UBE4B-202ENST00000343090 DDX42Q86XP3 938 aaKnown RBP eCLIP8.59□□□□□ -1.04
UBE4B-202ENST00000343090 ST13P4Q8IZP2 240 aaPredicted RBP8.59□□□□□ -1.04
UBE4B-202ENST00000343090 SLC35G2Q8TBE7 412 aa8.59□□□□□ -1.04
UBE4B-202ENST00000343090 NUDCD1Q96RS6 583 aa8.59□□□□□ -1.04
UBE4B-202ENST00000343090 WRNIP1Q96S55 665 aa8.59□□□□□ -1.04
UBE4B-202ENST00000343090 CYTH2Q99418 400 aa8.59□□□□□ -1.04
UBE4B-202ENST00000343090 LRRC4Q9HBW1 653 aa8.59□□□□□ -1.04
UBE4B-202ENST00000343090 BCAP29Q9UHQ4 241 aa8.59□□□□□ -1.04
UBE4B-202ENST00000343090 DCTN4Q9UJW0 460 aa8.59□□□□□ -1.04
UBE4B-202ENST00000343090 CCDC195A0A1B0GUA6 201 aa8.58□□□□□ -1.04
UBE4B-202ENST00000343090 ATP6V1G2O95670 118 aa8.58□□□□□ -1.04
UBE4B-202ENST00000343090 KITP10721 976 aa8.58□□□□□ -1.04
UBE4B-202ENST00000343090 BRAFP15056 766 aa8.58□□□□□ -1.04
UBE4B-202ENST00000343090 TROAPQ12815 778 aa8.58□□□□□ -1.04
UBE4B-202ENST00000343090 GPS1Q13098 491 aa8.58□□□□□ -1.04
UBE4B-202ENST00000343090 NCAPHQ15003 741 aa8.58□□□□□ -1.04
UBE4B-202ENST00000343090 KRT39Q6A163 491 aa8.58□□□□□ -1.04
UBE4B-202ENST00000343090 GJB7Q6PEY0 223 aa8.58□□□□□ -1.04
UBE4B-202ENST00000343090 KIF2BQ8N4N8 673 aa8.58□□□□□ -1.04
UBE4B-202ENST00000343090 SPC25Q9HBM1 224 aa8.58□□□□□ -1.04
UBE4B-202ENST00000343090 CHCHD3Q9NX63 227 aaKnown RBP8.58□□□□□ -1.04
UBE4B-202ENST00000343090 DUSP10Q9Y6W6 482 aa8.58□□□□□ -1.04
UBE4B-202ENST00000343090 OVOS2A0A0G2JMS6 1433 aa8.58□□□□□ -1.04
UBE4B-202ENST00000343090 KIAA1210Q9ULL0 1709 aa8.58□□□□□ -1.04
UBE4B-202ENST00000343090 PDXKO00764 312 aa8.58□□□□□ -1.04
UBE4B-202ENST00000343090 CFLARO15519 480 aa8.58□□□□□ -1.04
UBE4B-202ENST00000343090 SYF2O95926 243 aaKnown RBP8.58□□□□□ -1.04
UBE4B-202ENST00000343090 OATP04181 439 aa8.58□□□□□ -1.04
UBE4B-202ENST00000343090 MYBL1P10243 752 aa8.58□□□□□ -1.04
UBE4B-202ENST00000343090 CHRNA3P32297 505 aa8.58□□□□□ -1.04
UBE4B-202ENST00000343090 RFC1P35251 1148 aaPredicted RBP8.58□□□□□ -1.04
UBE4B-202ENST00000343090 PAPOLAP51003 745 aaKnown RBP8.58□□□□□ -1.04
UBE4B-202ENST00000343090 SPARCL1Q14515 664 aa8.58□□□□□ -1.04
UBE4B-202ENST00000343090 DPY19L2Q6NUT2 758 aa8.58□□□□□ -1.04
UBE4B-202ENST00000343090 MCPH1Q8NEM0 835 aa8.58□□□□□ -1.04
UBE4B-202ENST00000343090 STAMBPL1Q96FJ0 436 aa8.58□□□□□ -1.04
UBE4B-202ENST00000343090 STOML1Q9UBI4 398 aa8.58□□□□□ -1.04
UBE4B-202ENST00000343090 MAPK13O15264 365 aa8.58□□□□□ -1.04
UBE4B-202ENST00000343090 LMNAP02545 664 aaKnown RBP8.58□□□□□ -1.04
UBE4B-202ENST00000343090 CHRNA5P30532 468 aa8.58□□□□□ -1.04
UBE4B-202ENST00000343090 KLC1Q07866 573 aa8.58□□□□□ -1.04
UBE4B-202ENST00000343090 HSP90AA5PQ58FG0 334 aa8.58□□□□□ -1.04
UBE4B-202ENST00000343090 JADE1Q6IE81 842 aa8.58□□□□□ -1.04
UBE4B-202ENST00000343090 TMEM35BQ8NCS4 154 aa8.58□□□□□ -1.04
UBE4B-202ENST00000343090 CEP70Q8NHQ1 597 aa8.58□□□□□ -1.04
UBE4B-202ENST00000343090 FAM118BQ9BPY3 351 aa8.58□□□□□ -1.04
UBE4B-202ENST00000343090 MAD2L2Q9UI95 211 aa8.58□□□□□ -1.04
UBE4B-202ENST00000343090 IQANK1A0A1B0GTG1 560 aa8.58□□□□□ -1.04
UBE4B-202ENST00000343090 NDUFB10O96000 172 aa8.58□□□□□ -1.04
UBE4B-202ENST00000343090 HNRNPCP07910 306 aaKnown RBP eCLIP8.58□□□□□ -1.04
UBE4B-202ENST00000343090 STXBP2Q15833 593 aa8.58□□□□□ -1.04
UBE4B-202ENST00000343090 ZNF568Q3ZCX4 644 aa8.58□□□□□ -1.04
UBE4B-202ENST00000343090 CEP55Q53EZ4 464 aa8.58□□□□□ -1.04
UBE4B-202ENST00000343090 SPOPLQ6IQ16 392 aa8.58□□□□□ -1.04
UBE4B-202ENST00000343090 PRR5LQ6MZQ0 368 aa8.58□□□□□ -1.04
UBE4B-202ENST00000343090 TRAPPC11Q7Z392 1133 aa8.58□□□□□ -1.04
UBE4B-202ENST00000343090 FBXO33Q7Z6M2 555 aa8.58□□□□□ -1.04
UBE4B-202ENST00000343090 ZBED8Q8IZ13 594 aa8.58□□□□□ -1.04
UBE4B-202ENST00000343090 RTKN2Q8IZC4 609 aa8.58□□□□□ -1.04
UBE4B-202ENST00000343090 RNF217Q8TC41 542 aa8.58□□□□□ -1.04
UBE4B-202ENST00000343090 CCDC68Q9H2F9 335 aa8.58□□□□□ -1.04
UBE4B-202ENST00000343090 MCM8Q9UJA3 840 aa8.58□□□□□ -1.04
UBE4B-202ENST00000343090 PI4K2BG5E9Z4 385 aa8.57□□□□□ -1.04
UBE4B-202ENST00000343090 SLC37A4O43826 429 aa8.57□□□□□ -1.04
UBE4B-202ENST00000343090 LDHAP00338 332 aaKnown RBP8.57□□□□□ -1.04
UBE4B-202ENST00000343090 OSBPP22059 807 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms