RNA–Protein interactions for RNA: ENST00000343017.11

SNX18-202, Transcript of sorting nexin 18, humanhuman

BASIC

Gene SNX18, Length 3,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18-202ENST00000343017 HIBADHP31937 336 aaKnown RBP16.35■□□□□ 0.21
SNX18-202ENST00000343017 DENND2DQ9H6A0 471 aaPredicted RBP16.35■□□□□ 0.21
SNX18-202ENST00000343017 INTUQ9ULD6 942 aa16.35■□□□□ 0.21
SNX18-202ENST00000343017 TP73O15350 636 aa16.35■□□□□ 0.21
SNX18-202ENST00000343017 NR3C1P04150 777 aa16.35■□□□□ 0.21
SNX18-202ENST00000343017 ZC3H3Q8IXZ2 948 aaKnown RBP16.35■□□□□ 0.21
SNX18-202ENST00000343017 DNAJC9Q8WXX5 260 aa16.35■□□□□ 0.21
SNX18-202ENST00000343017 LZTS2Q9BRK4 669 aa16.35■□□□□ 0.21
SNX18-202ENST00000343017 CCNL1Q9UK58 526 aaPredicted RBP16.35■□□□□ 0.21
SNX18-202ENST00000343017 PYGLP06737 847 aa16.34■□□□□ 0.21
SNX18-202ENST00000343017 T-ENOLP0DO92 83 aa16.34■□□□□ 0.21
SNX18-202ENST00000343017 COMTP21964 271 aa16.34■□□□□ 0.21
SNX18-202ENST00000343017 COILP38432 576 aaPredicted RBP16.34■□□□□ 0.21
SNX18-202ENST00000343017 ROR2Q01974 943 aaKnown RBP16.34■□□□□ 0.21
SNX18-202ENST00000343017 TRAF1Q13077 416 aa16.34■□□□□ 0.21
SNX18-202ENST00000343017 RFWD3Q6PCD5 774 aa16.34■□□□□ 0.21
SNX18-202ENST00000343017 NCANO14594 1321 aa16.34■□□□□ 0.21
SNX18-202ENST00000343017 PODXLO00592 558 aa16.34■□□□□ 0.21
SNX18-202ENST00000343017 KLC1Q07866 573 aa16.34■□□□□ 0.21
SNX18-202ENST00000343017 MTFR1Q15390 333 aa16.34■□□□□ 0.21
SNX18-202ENST00000343017 RNF43Q68DV7 783 aa16.34■□□□□ 0.21
SNX18-202ENST00000343017 LRRC47Q8N1G4 583 aaKnown RBP16.34■□□□□ 0.21
SNX18-202ENST00000343017 REEP2Q9BRK0 252 aa16.34■□□□□ 0.21
SNX18-202ENST00000343017 ANKIB1Q9P2G1 1089 aa16.34■□□□□ 0.21
SNX18-202ENST00000343017 PCYOX1Q9UHG3 505 aa16.34■□□□□ 0.21
SNX18-202ENST00000343017 LMNB1P20700 586 aa16.34■□□□□ 0.21
SNX18-202ENST00000343017 PPP2R5EQ16537 467 aa16.34■□□□□ 0.21
SNX18-202ENST00000343017 MUM1Q2TAK8 710 aa16.34■□□□□ 0.21
SNX18-202ENST00000343017 FOXB2Q5VYV0 432 aa16.34■□□□□ 0.21
SNX18-202ENST00000343017 TBC1D9BQ66K14 1250 aa16.34■□□□□ 0.21
SNX18-202ENST00000343017 MFN1Q8IWA4 741 aa16.34■□□□□ 0.21
SNX18-202ENST00000343017 ASAP3Q8TDY4 903 aa16.34■□□□□ 0.21
SNX18-202ENST00000343017 SLC7A6OSQ96CW6 309 aaPredicted RBP16.34■□□□□ 0.21
SNX18-202ENST00000343017 DHX36Q9H2U1 1008 aaKnown RBP16.34■□□□□ 0.21
SNX18-202ENST00000343017 ZNF652Q9Y2D9 606 aa16.34■□□□□ 0.21
SNX18-202ENST00000343017 LTBP4Q8N2S1 1624 aa16.33■□□□□ 0.21
SNX18-202ENST00000343017 GPR75-ASB3A0A0A6YYF3 556 aa16.33■□□□□ 0.21
SNX18-202ENST00000343017 SMAPO00193 183 aa16.33■□□□□ 0.21
SNX18-202ENST00000343017 TRIM49P0CI25 452 aa16.33■□□□□ 0.21
SNX18-202ENST00000343017 TRIM49CP0CI26 452 aa16.33■□□□□ 0.21
SNX18-202ENST00000343017 DLATP10515 647 aaKnown RBP16.33■□□□□ 0.21
SNX18-202ENST00000343017 CTNNA2P26232 953 aa16.33■□□□□ 0.21
SNX18-202ENST00000343017 WDR4P57081 412 aaKnown RBP16.33■□□□□ 0.21
SNX18-202ENST00000343017 MRPS35P82673 323 aaKnown RBP16.33■□□□□ 0.21
SNX18-202ENST00000343017 CALCOCO2Q13137 446 aa16.33■□□□□ 0.21
SNX18-202ENST00000343017 GIT2Q14161 759 aa16.33■□□□□ 0.21
SNX18-202ENST00000343017 AMIGO3Q86WK7 504 aa16.33■□□□□ 0.21
SNX18-202ENST00000343017 GALNT15Q8N3T1 639 aa16.33■□□□□ 0.21
SNX18-202ENST00000343017 NT5C3AQ9H0P0 336 aa16.33■□□□□ 0.21
SNX18-202ENST00000343017 TXLNGQ9NUQ3 528 aa16.33■□□□□ 0.21
SNX18-202ENST00000343017 NAALADL1Q9UQQ1 740 aa16.33■□□□□ 0.21
SNX18-202ENST00000343017 ASB3Q9Y575 518 aa16.33■□□□□ 0.21
SNX18-202ENST00000343017 RREB1Q92766 1687 aa16.33■□□□□ 0.2
SNX18-202ENST00000343017 WFS1O76024 890 aa16.33■□□□□ 0.2
SNX18-202ENST00000343017 CDK8P49336 464 aa16.33■□□□□ 0.2
SNX18-202ENST00000343017 COG2Q14746 738 aa16.33■□□□□ 0.2
SNX18-202ENST00000343017 KHDC1Q4VXA5 237 aaKnown RBP16.33■□□□□ 0.2
SNX18-202ENST00000343017 APBB1IPQ7Z5R6 666 aaPredicted RBP16.33■□□□□ 0.2
SNX18-202ENST00000343017 ATG4AQ8WYN0 398 aa16.33■□□□□ 0.2
SNX18-202ENST00000343017 ROPN1BQ9BZX4 212 aaPredicted RBP16.33■□□□□ 0.2
SNX18-202ENST00000343017 GPR88Q9GZN0 384 aa16.33■□□□□ 0.2
SNX18-202ENST00000343017 LRMDAQ9H2I8 198 aa16.33■□□□□ 0.2
SNX18-202ENST00000343017 ROPN1Q9HAT0 212 aaPredicted RBP16.33■□□□□ 0.2
SNX18-202ENST00000343017 TRAF3IP3Q9Y228 551 aa16.33■□□□□ 0.2
SNX18-202ENST00000343017 DIS3Q9Y2L1 958 aaKnown RBP16.33■□□□□ 0.2
SNX18-202ENST00000343017 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.33■□□□□ 0.2
SNX18-202ENST00000343017 ASTN1O14525 1302 aa16.32■□□□□ 0.2
SNX18-202ENST00000343017 PITPNM2Q9BZ72 1349 aa16.32■□□□□ 0.2
SNX18-202ENST00000343017 FOXN3O00409 490 aaPredicted RBP16.32■□□□□ 0.2
SNX18-202ENST00000343017 GCNT3O95395 438 aa16.32■□□□□ 0.2
SNX18-202ENST00000343017 FTLP02792 175 aaPredicted RBP16.32■□□□□ 0.2
SNX18-202ENST00000343017 SLC16A2P36021 539 aa16.32■□□□□ 0.2
SNX18-202ENST00000343017 ERFP50548 548 aa16.32■□□□□ 0.2
SNX18-202ENST00000343017 ZC2HC1CQ53FD0 456 aaPredicted RBP16.32■□□□□ 0.2
SNX18-202ENST00000343017 CROCCP2Q86T23 111 aa16.32■□□□□ 0.2
SNX18-202ENST00000343017 SERPINB12Q96P63 405 aa16.32■□□□□ 0.2
SNX18-202ENST00000343017 LRRC37BQ96QE4 947 aa16.32■□□□□ 0.2
SNX18-202ENST00000343017 EPAS1Q99814 870 aa16.32■□□□□ 0.2
SNX18-202ENST00000343017 ZSWIM1Q9BR11 485 aa16.32■□□□□ 0.2
SNX18-202ENST00000343017 WDR35Q9P2L0 1181 aa16.32■□□□□ 0.2
SNX18-202ENST00000343017 PARP2Q9UGN5 583 aa16.32■□□□□ 0.2
SNX18-202ENST00000343017 ASIC3Q9UHC3 531 aa16.32■□□□□ 0.2
SNX18-202ENST00000343017 PPP1R11O60927 126 aaPredicted RBP16.32■□□□□ 0.2
SNX18-202ENST00000343017 ALAS1P13196 640 aa16.32■□□□□ 0.2
SNX18-202ENST00000343017 RBM5P52756 815 aaKnown RBP eCLIP16.32■□□□□ 0.2
SNX18-202ENST00000343017 SLC12A3P55017 1021 aa16.32■□□□□ 0.2
SNX18-202ENST00000343017 LAMB3Q13751 1172 aa16.32■□□□□ 0.2
SNX18-202ENST00000343017 SETDB1Q15047 1291 aa16.32■□□□□ 0.2
SNX18-202ENST00000343017 CBWD6Q4V339 395 aa16.32■□□□□ 0.2
SNX18-202ENST00000343017 CBWD3Q5JTY5 395 aa16.32■□□□□ 0.2
SNX18-202ENST00000343017 CBWD5Q5RIA9 395 aa16.32■□□□□ 0.2
SNX18-202ENST00000343017 NBPF5PQ86XG9 351 aaPredicted RBP16.32■□□□□ 0.2
SNX18-202ENST00000343017 RDH13Q8NBN7 331 aa16.32■□□□□ 0.2
SNX18-202ENST00000343017 MRRFQ96E11 262 aaKnown RBP16.32■□□□□ 0.2
SNX18-202ENST00000343017 MAGEB18Q96M61 343 aa16.32■□□□□ 0.2
SNX18-202ENST00000343017 FAM118BQ9BPY3 351 aa16.32■□□□□ 0.2
SNX18-202ENST00000343017 RUSC1Q9BVN2 902 aa16.32■□□□□ 0.2
SNX18-202ENST00000343017 MXD3Q9BW11 206 aa16.32■□□□□ 0.2
SNX18-202ENST00000343017 MOV10L1Q9BXT6 1211 aaKnown RBP16.32■□□□□ 0.2
SNX18-202ENST00000343017 ACP6Q9NPH0 428 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms