RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 RTN2O75298 545 aa15.7■□□□□ 0.1
TDP2-201ENST00000341060 GZMAP12544 262 aa15.7■□□□□ 0.1
TDP2-201ENST00000341060 GPC5P78333 572 aa15.7■□□□□ 0.1
TDP2-201ENST00000341060 DHX9Q08211 1270 aaKnown RBP15.7■□□□□ 0.1
TDP2-201ENST00000341060 ZNF211Q13398 564 aaPredicted RBP15.7■□□□□ 0.1
TDP2-201ENST00000341060 DUPD1Q68J44 220 aa15.7■□□□□ 0.1
TDP2-201ENST00000341060 B4GALNT4Q76KP1 1039 aa15.7■□□□□ 0.1
TDP2-201ENST00000341060 UBL4BQ8N7F7 174 aa15.7■□□□□ 0.1
TDP2-201ENST00000341060 SYTL5Q8TDW5 730 aaPredicted RBP15.7■□□□□ 0.1
TDP2-201ENST00000341060 ERP44Q9BS26 406 aa15.7■□□□□ 0.1
TDP2-201ENST00000341060 CENPHQ9H3R5 247 aa15.7■□□□□ 0.1
TDP2-201ENST00000341060 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.7■□□□□ 0.1
TDP2-201ENST00000341060 FAM187AA6NFU0 413 aa15.7■□□□□ 0.1
TDP2-201ENST00000341060 PPFIA2O75334 1257 aa15.7■□□□□ 0.1
TDP2-201ENST00000341060 MTA2O94776 668 aa15.7■□□□□ 0.1
TDP2-201ENST00000341060 ALAS1P13196 640 aa15.7■□□□□ 0.1
TDP2-201ENST00000341060 HSPA6P17066 643 aa15.7■□□□□ 0.1
TDP2-201ENST00000341060 HPDP32754 393 aaPredicted RBP15.7■□□□□ 0.1
TDP2-201ENST00000341060 UGCGQ16739 394 aa15.7■□□□□ 0.1
TDP2-201ENST00000341060 KCTD19Q17RG1 926 aaPredicted RBP15.7■□□□□ 0.1
TDP2-201ENST00000341060 AGBL2Q5U5Z8 902 aa15.7■□□□□ 0.1
TDP2-201ENST00000341060 TADA2BQ86TJ2 420 aa15.7■□□□□ 0.1
TDP2-201ENST00000341060 FAM71AQ8IYT1 594 aa15.7■□□□□ 0.1
TDP2-201ENST00000341060 SAMD3Q8N6K7 520 aa15.7■□□□□ 0.1
TDP2-201ENST00000341060 AGBL3Q8NEM8 1001 aa15.7■□□□□ 0.1
TDP2-201ENST00000341060 SH2D3AQ9BRG2 576 aa15.7■□□□□ 0.1
TDP2-201ENST00000341060 PAGR1Q9BTK6 254 aa15.7■□□□□ 0.1
TDP2-201ENST00000341060 TXLNGYQ9BZA5 131 aa15.7■□□□□ 0.1
TDP2-201ENST00000341060 SLC38A10Q9HBR0 1119 aa15.7■□□□□ 0.1
TDP2-201ENST00000341060 TMOD4Q9NZQ9 345 aa15.7■□□□□ 0.1
TDP2-201ENST00000341060 SLC12A6Q9UHW9 1150 aa15.7■□□□□ 0.1
TDP2-201ENST00000341060 NOCTQ9UK39 431 aaKnown RBP15.7■□□□□ 0.1
TDP2-201ENST00000341060 FAM170AA1A519 330 aa15.69■□□□□ 0.1
TDP2-201ENST00000341060 BACH1O14867 736 aa15.69■□□□□ 0.1
TDP2-201ENST00000341060 SLC16A4O15374 487 aa15.69■□□□□ 0.1
TDP2-201ENST00000341060 CPP00450 1065 aa15.69■□□□□ 0.1
TDP2-201ENST00000341060 ADRB2P07550 413 aa15.69■□□□□ 0.1
TDP2-201ENST00000341060 PEX3P56589 373 aa15.69■□□□□ 0.1
TDP2-201ENST00000341060 PGM5Q15124 567 aa15.69■□□□□ 0.1
TDP2-201ENST00000341060 ADAT2Q7Z6V5 191 aaKnown RBP15.69■□□□□ 0.1
TDP2-201ENST00000341060 SPATS2Q86XZ4 545 aaKnown RBP15.69■□□□□ 0.1
TDP2-201ENST00000341060 CPXCR1Q8N123 301 aa15.69■□□□□ 0.1
TDP2-201ENST00000341060 NLGN2Q8NFZ4 835 aa15.69■□□□□ 0.1
TDP2-201ENST00000341060 KAT5Q92993 513 aa15.69■□□□□ 0.1
TDP2-201ENST00000341060 ZBED3Q96IU2 234 aaPredicted RBP15.69■□□□□ 0.1
TDP2-201ENST00000341060 RPS6KC1Q96S38 1066 aa15.69■□□□□ 0.1
TDP2-201ENST00000341060 ZSWIM1Q9BR11 485 aa15.69■□□□□ 0.1
TDP2-201ENST00000341060 ZDHHC18Q9NUE0 388 aa15.69■□□□□ 0.1
TDP2-201ENST00000341060 MYH9P35579 1960 aaKnown RBP15.69■□□□□ 0.1
TDP2-201ENST00000341060 TMEM150BA6NC51 233 aa15.68■□□□□ 0.1
TDP2-201ENST00000341060 PHF20L1A8MW92 1017 aa15.68■□□□□ 0.1
TDP2-201ENST00000341060 COPB2P35606 906 aa15.68■□□□□ 0.1
TDP2-201ENST00000341060 DRG2P55039 364 aaKnown RBP15.68■□□□□ 0.1
TDP2-201ENST00000341060 PSMC5P62195 406 aa15.68■□□□□ 0.1
TDP2-201ENST00000341060 SNRNP35Q16560 246 aaKnown RBP15.68■□□□□ 0.1
TDP2-201ENST00000341060 ZNF746Q6NUN9 644 aaPredicted RBP15.68■□□□□ 0.1
TDP2-201ENST00000341060 NOP9Q86U38 636 aaKnown RBP15.68■□□□□ 0.1
TDP2-201ENST00000341060 SHC3Q92529 594 aa15.68■□□□□ 0.1
TDP2-201ENST00000341060 KRT35Q92764 455 aa15.68■□□□□ 0.1
TDP2-201ENST00000341060 PCDHB18PQ96TA0 734 aa15.68■□□□□ 0.1
TDP2-201ENST00000341060 TRIM31Q9BZY9 425 aa15.68■□□□□ 0.1
TDP2-201ENST00000341060 GPRC5CQ9NQ84 441 aa15.68■□□□□ 0.1
TDP2-201ENST00000341060 HOMER2Q9NSB8 354 aa15.68■□□□□ 0.1
TDP2-201ENST00000341060 CD2APQ9Y5K6 639 aa15.68■□□□□ 0.1
TDP2-201ENST00000341060 WNT10BO00744 389 aa15.68■□□□□ 0.1
TDP2-201ENST00000341060 PHF2O75151 1096 aa15.68■□□□□ 0.1
TDP2-201ENST00000341060 SGPL1O95470 568 aa15.68■□□□□ 0.1
TDP2-201ENST00000341060 CHRNB2P17787 502 aa15.68■□□□□ 0.1
TDP2-201ENST00000341060 EIF2AK2P19525 551 aaKnown RBP15.68■□□□□ 0.1
TDP2-201ENST00000341060 SFNP31947 248 aa15.68■□□□□ 0.1
TDP2-201ENST00000341060 USP8P40818 1118 aa15.68■□□□□ 0.1
TDP2-201ENST00000341060 JAK3P52333 1124 aa15.68■□□□□ 0.1
TDP2-201ENST00000341060 EIF3BP55884 814 aaKnown RBP15.68■□□□□ 0.1
TDP2-201ENST00000341060 RPS6P62753 249 aaKnown RBP15.68■□□□□ 0.1
TDP2-201ENST00000341060 RASA3Q14644 834 aa15.68■□□□□ 0.1
TDP2-201ENST00000341060 JAMLQ86YT9 394 aa15.68■□□□□ 0.1
TDP2-201ENST00000341060 PPM1KQ8N3J5 372 aa15.68■□□□□ 0.1
TDP2-201ENST00000341060 MYCBPAPQ8TBZ2 947 aa15.68■□□□□ 0.1
TDP2-201ENST00000341060 MORC4Q8TE76 937 aa15.68■□□□□ 0.1
TDP2-201ENST00000341060 GLG1Q92896 1179 aa15.68■□□□□ 0.1
TDP2-201ENST00000341060 KREMEN1Q96MU8 473 aa15.68■□□□□ 0.1
TDP2-201ENST00000341060 TAAR1Q96RJ0 339 aa15.68■□□□□ 0.1
TDP2-201ENST00000341060 KIAA1683Q9H0B3 1180 aa15.68■□□□□ 0.1
TDP2-201ENST00000341060 RAVER2Q9HCJ3 691 aaKnown RBP15.68■□□□□ 0.1
TDP2-201ENST00000341060 RASAL2Q9UJF2 1139 aa15.68■□□□□ 0.1
TDP2-201ENST00000341060 EXOC7Q9UPT5 735 aa15.68■□□□□ 0.1
TDP2-201ENST00000341060 WDR64B1ANS9 1081 aa15.67■□□□□ 0.1
TDP2-201ENST00000341060 ERLIN2O94905 339 aa15.67■□□□□ 0.1
TDP2-201ENST00000341060 FAM107AO95990 144 aa15.67■□□□□ 0.1
TDP2-201ENST00000341060 ADSSP30520 456 aa15.67■□□□□ 0.1
TDP2-201ENST00000341060 CHRNA3P32297 505 aa15.67■□□□□ 0.1
TDP2-201ENST00000341060 MARCKSL1P49006 195 aa15.67■□□□□ 0.1
TDP2-201ENST00000341060 PEX5P50542 639 aa15.67■□□□□ 0.1
TDP2-201ENST00000341060 MFAP3P55082 362 aa15.67■□□□□ 0.1
TDP2-201ENST00000341060 MAP2K1Q02750 393 aaPredicted RBP15.67■□□□□ 0.1
TDP2-201ENST00000341060 KRT39Q6A163 491 aa15.67■□□□□ 0.1
TDP2-201ENST00000341060 NLRP14Q86W24 1093 aa15.67■□□□□ 0.1
TDP2-201ENST00000341060 CBWD2Q8IUF1 395 aa15.67■□□□□ 0.1
TDP2-201ENST00000341060 MAP4K3Q8IVH8 894 aa15.67■□□□□ 0.1
TDP2-201ENST00000341060 TMEM161BQ8NDZ6 487 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms