RNA–Protein interactions for RNA: ENST00000340480.8

HIPK1-201, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene HIPK1, Length 6,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-201ENST00000340480 ERVK-24P63145 666 aa8.15□□□□□ -1.1
HIPK1-201ENST00000340480 CCDC25Q86WR0 208 aa8.15□□□□□ -1.1
HIPK1-201ENST00000340480 MMGT1Q8N4V1 131 aa8.15□□□□□ -1.1
HIPK1-201ENST00000340480 RBAKQ9NYW8 714 aaPredicted RBP8.15□□□□□ -1.1
HIPK1-201ENST00000340480 AIPL1Q9NZN9 384 aa8.15□□□□□ -1.1
HIPK1-201ENST00000340480 SLC8A2Q9UPR5 921 aa8.15□□□□□ -1.1
HIPK1-201ENST00000340480 STK25O00506 426 aa8.15□□□□□ -1.11
HIPK1-201ENST00000340480 MARSP56192 900 aaKnown RBP8.15□□□□□ -1.11
HIPK1-201ENST00000340480 TFAMQ00059 246 aaKnown RBP8.15□□□□□ -1.11
HIPK1-201ENST00000340480 PAPD7Q5XG87 772 aaKnown RBP8.15□□□□□ -1.11
HIPK1-201ENST00000340480 SLC9A9Q8IVB4 645 aa8.15□□□□□ -1.11
HIPK1-201ENST00000340480 USTQ9Y2C2 406 aa8.15□□□□□ -1.11
HIPK1-201ENST00000340480 TJP1Q07157 1748 aa8.15□□□□□ -1.11
HIPK1-201ENST00000340480 NPHP3-ACAD11A0A0J9YXS1 232 aa8.15□□□□□ -1.11
HIPK1-201ENST00000340480 TLDC2A0PJX2 215 aa8.15□□□□□ -1.11
HIPK1-201ENST00000340480 F8W8V4 182 aa8.15□□□□□ -1.11
HIPK1-201ENST00000340480 VWA5AO00534 786 aa8.15□□□□□ -1.11
HIPK1-201ENST00000340480 PSMD10O75832 226 aa8.15□□□□□ -1.11
HIPK1-201ENST00000340480 ATF2P15336 505 aa8.15□□□□□ -1.11
HIPK1-201ENST00000340480 CLK2P49760 499 aaKnown RBP8.15□□□□□ -1.11
HIPK1-201ENST00000340480 DHX34Q14147 1143 aaKnown RBP8.15□□□□□ -1.11
HIPK1-201ENST00000340480 DUOXA2Q1HG44 320 aa8.15□□□□□ -1.11
HIPK1-201ENST00000340480 VPS52Q8N1B4 723 aa8.15□□□□□ -1.11
HIPK1-201ENST00000340480 ETNPPLQ8TBG4 499 aa8.15□□□□□ -1.11
HIPK1-201ENST00000340480 GCNAQ96QF7 691 aa8.15□□□□□ -1.11
HIPK1-201ENST00000340480 PARK7Q99497 189 aaKnown RBP8.15□□□□□ -1.11
HIPK1-201ENST00000340480 FAM213AQ9BRX8 229 aa8.15□□□□□ -1.11
HIPK1-201ENST00000340480 EPB41L5Q9HCM4 733 aa8.15□□□□□ -1.11
HIPK1-201ENST00000340480 CNOT8Q9UFF9 292 aaKnown RBP8.15□□□□□ -1.11
HIPK1-201ENST00000340480 LOC102724159A0A0B4J2E5 919 aa8.14□□□□□ -1.11
HIPK1-201ENST00000340480 EXTL3O43909 919 aa8.14□□□□□ -1.11
HIPK1-201ENST00000340480 HBP1O60381 514 aa8.14□□□□□ -1.11
HIPK1-201ENST00000340480 CETPP11597 493 aa8.14□□□□□ -1.11
HIPK1-201ENST00000340480 PHBP35232 272 aa8.14□□□□□ -1.11
HIPK1-201ENST00000340480 NOVP48745 357 aa8.14□□□□□ -1.11
HIPK1-201ENST00000340480 PWP2Q15269 919 aaKnown RBP8.14□□□□□ -1.11
HIPK1-201ENST00000340480 NFIL3Q16649 462 aa8.14□□□□□ -1.11
HIPK1-201ENST00000340480 CPLX4Q7Z7G2 160 aa8.14□□□□□ -1.11
HIPK1-201ENST00000340480 TTC13Q8NBP0 860 aa8.14□□□□□ -1.11
HIPK1-201ENST00000340480 CAMKK2Q96RR4 588 aa8.14□□□□□ -1.11
HIPK1-201ENST00000340480 MED10Q9BTT4 135 aa8.14□□□□□ -1.11
HIPK1-201ENST00000340480 UBIAD1Q9Y5Z9 338 aa8.14□□□□□ -1.11
HIPK1-201ENST00000340480 ABCA3Q99758 1704 aa8.14□□□□□ -1.11
HIPK1-201ENST00000340480 GOLGA8IPA6NC78 632 aa8.14□□□□□ -1.11
HIPK1-201ENST00000340480 GOLGA8JA6NMD2 632 aa8.14□□□□□ -1.11
HIPK1-201ENST00000340480 PBX1P40424 430 aa8.14□□□□□ -1.11
HIPK1-201ENST00000340480 NAMPTP43490 491 aa8.14□□□□□ -1.11
HIPK1-201ENST00000340480 GCLCP48506 637 aaPredicted RBP8.14□□□□□ -1.11
HIPK1-201ENST00000340480 PGM5Q15124 567 aa8.14□□□□□ -1.11
HIPK1-201ENST00000340480 DNAJC21Q5F1R6 531 aaKnown RBP8.14□□□□□ -1.11
HIPK1-201ENST00000340480 TRIM65Q6PJ69 517 aa8.14□□□□□ -1.11
HIPK1-201ENST00000340480 TRAPPC11Q7Z392 1133 aa8.14□□□□□ -1.11
HIPK1-201ENST00000340480 BBS5Q8N3I7 341 aa8.14□□□□□ -1.11
HIPK1-201ENST00000340480 DNAJC19Q96DA6 116 aa8.14□□□□□ -1.11
HIPK1-201ENST00000340480 ZHX1Q9UKY1 873 aaPredicted RBP8.14□□□□□ -1.11
HIPK1-201ENST00000340480 NDUFAB1O14561 156 aa8.14□□□□□ -1.11
HIPK1-201ENST00000340480 SUPT20HL2P0C7V6 817 aa8.14□□□□□ -1.11
HIPK1-201ENST00000340480 ARP10275 920 aa8.14□□□□□ -1.11
HIPK1-201ENST00000340480 NFKBIAP25963 317 aa8.14□□□□□ -1.11
HIPK1-201ENST00000340480 RTP1P59025 263 aa8.14□□□□□ -1.11
HIPK1-201ENST00000340480 LRRC55Q6ZSA7 311 aa8.14□□□□□ -1.11
HIPK1-201ENST00000340480 GPIHBP1Q8IV16 184 aa8.14□□□□□ -1.11
HIPK1-201ENST00000340480 RPUSD2Q8IZ73 545 aaKnown RBP8.14□□□□□ -1.11
HIPK1-201ENST00000340480 SPATA4Q8NEY3 305 aa8.14□□□□□ -1.11
HIPK1-201ENST00000340480 MMTAG2Q9BU76 263 aaKnown RBP8.14□□□□□ -1.11
HIPK1-201ENST00000340480 ABCB6Q9NP58 842 aa8.14□□□□□ -1.11
HIPK1-201ENST00000340480 PRMT7Q9NVM4 692 aaPredicted RBP8.14□□□□□ -1.11
HIPK1-201ENST00000340480 ADAM22Q9P0K1 906 aa8.14□□□□□ -1.11
HIPK1-201ENST00000340480 TBX20Q9UMR3 447 aa8.14□□□□□ -1.11
HIPK1-201ENST00000340480 FHOD1Q9Y613 1164 aa8.14□□□□□ -1.11
HIPK1-201ENST00000340480 C4BP0C0L5 1744 aa8.14□□□□□ -1.11
HIPK1-201ENST00000340480 IL18RAPO95256 599 aa8.14□□□□□ -1.11
HIPK1-201ENST00000340480 GZMAP12544 262 aa8.14□□□□□ -1.11
HIPK1-201ENST00000340480 ZNF568Q3ZCX4 644 aa8.14□□□□□ -1.11
HIPK1-201ENST00000340480 RNF169Q8NCN4 708 aa8.14□□□□□ -1.11
HIPK1-201ENST00000340480 PDE11AQ9HCR9 933 aa8.14□□□□□ -1.11
HIPK1-201ENST00000340480 WDR35Q9P2L0 1181 aa8.14□□□□□ -1.11
HIPK1-201ENST00000340480 M0R2N6 131 aa8.14□□□□□ -1.11
HIPK1-201ENST00000340480 RGS16O15492 202 aaPredicted RBP8.14□□□□□ -1.11
HIPK1-201ENST00000340480 EVI5O60447 810 aa8.14□□□□□ -1.11
HIPK1-201ENST00000340480 SLITRK3O94933 977 aa8.14□□□□□ -1.11
HIPK1-201ENST00000340480 INPP5BP32019 993 aa8.14□□□□□ -1.11
HIPK1-201ENST00000340480 ARHGAP25P42331 645 aa8.14□□□□□ -1.11
HIPK1-201ENST00000340480 SLC12A3P55017 1021 aa8.14□□□□□ -1.11
HIPK1-201ENST00000340480 ACTR2P61160 394 aa8.14□□□□□ -1.11
HIPK1-201ENST00000340480 SARNPP82979 210 aaKnown RBP8.14□□□□□ -1.11
HIPK1-201ENST00000340480 DR1Q01658 176 aa8.14□□□□□ -1.11
HIPK1-201ENST00000340480 CEP85LQ5SZL2 805 aa8.14□□□□□ -1.11
HIPK1-201ENST00000340480 GLYCTKQ8IVS8 523 aa8.14□□□□□ -1.11
HIPK1-201ENST00000340480 SELENOSQ9BQE4 189 aa8.14□□□□□ -1.11
HIPK1-201ENST00000340480 TRIM31Q9BZY9 425 aa8.14□□□□□ -1.11
HIPK1-201ENST00000340480 CNOT10Q9H9A5 744 aaKnown RBP8.14□□□□□ -1.11
HIPK1-201ENST00000340480 SUCLA2Q9P2R7 463 aaPredicted RBP8.14□□□□□ -1.11
HIPK1-201ENST00000340480 PCDHB2Q9Y5E7 798 aa8.14□□□□□ -1.11
HIPK1-201ENST00000340480 NFASCO94856 1347 aa8.14□□□□□ -1.11
HIPK1-201ENST00000340480 ITGB4P16144 1822 aa8.13□□□□□ -1.11
HIPK1-201ENST00000340480 PJA2O43164 708 aa8.13□□□□□ -1.11
HIPK1-201ENST00000340480 GH1P01241 217 aa8.13□□□□□ -1.11
HIPK1-201ENST00000340480 ATP1A1P05023 1023 aaKnown RBP8.13□□□□□ -1.11
HIPK1-201ENST00000340480 RARRES1P49788 294 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms