RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 PDGFRBP09619 1106 aa13.75□□□□□ -0.21
LIN54-201ENST00000340417 PSMA2P25787 234 aa13.75□□□□□ -0.21
LIN54-201ENST00000340417 IFNL1Q8IU54 200 aa13.75□□□□□ -0.21
LIN54-201ENST00000340417 KLHL7Q8IXQ5 586 aa13.75□□□□□ -0.21
LIN54-201ENST00000340417 ATP8B4Q8TF62 1192 aa13.75□□□□□ -0.21
LIN54-201ENST00000340417 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.75□□□□□ -0.21
LIN54-201ENST00000340417 CHAMP1Q96JM3 812 aa13.75□□□□□ -0.21
LIN54-201ENST00000340417 TRPV2Q9Y5S1 764 aa13.75□□□□□ -0.21
LIN54-201ENST00000340417 EMILIN2Q9BXX0 1053 aa13.75□□□□□ -0.21
LIN54-201ENST00000340417 NRXN3Q9Y4C0 1643 aa13.75□□□□□ -0.21
LIN54-201ENST00000340417 ARHGAP6O43182 974 aa13.75□□□□□ -0.21
LIN54-201ENST00000340417 LCP1P13796 627 aa13.75□□□□□ -0.21
LIN54-201ENST00000340417 RAB27AP51159 221 aa13.75□□□□□ -0.21
LIN54-201ENST00000340417 CEP63Q96MT8 703 aa13.75□□□□□ -0.21
LIN54-201ENST00000340417 KLRC2P26717 231 aa13.74□□□□□ -0.21
LIN54-201ENST00000340417 RPA1P27694 616 aa13.74□□□□□ -0.21
LIN54-201ENST00000340417 MTMR14Q8NCE2 650 aa13.74□□□□□ -0.21
LIN54-201ENST00000340417 UBQLN1Q9UMX0 589 aaKnown RBP13.74□□□□□ -0.21
LIN54-201ENST00000340417 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.74□□□□□ -0.21
LIN54-201ENST00000340417 NME3Q13232 169 aa13.74□□□□□ -0.21
LIN54-201ENST00000340417 GLRA4Q5JXX5 417 aa13.74□□□□□ -0.21
LIN54-201ENST00000340417 RANBP17Q9H2T7 1088 aaKnown RBP13.74□□□□□ -0.21
LIN54-201ENST00000340417 AFG3L2Q9Y4W6 797 aa13.74□□□□□ -0.21
LIN54-201ENST00000340417 NPM3O75607 178 aaKnown RBP13.74□□□□□ -0.21
LIN54-201ENST00000340417 REPS2Q8NFH8 660 aa13.74□□□□□ -0.21
LIN54-201ENST00000340417 GRK7Q8WTQ7 553 aa13.74□□□□□ -0.21
LIN54-201ENST00000340417 IL17RBQ9NRM6 502 aa13.74□□□□□ -0.21
LIN54-201ENST00000340417 ZNF148Q9UQR1 794 aa13.74□□□□□ -0.21
LIN54-201ENST00000340417 TAF6P49848 677 aa13.74□□□□□ -0.21
LIN54-201ENST00000340417 C8orf74Q6P047 294 aa13.74□□□□□ -0.21
LIN54-201ENST00000340417 MRPL9Q9BYD2 267 aaKnown RBP13.74□□□□□ -0.21
LIN54-201ENST00000340417 RIOX1Q9H6W3 641 aa13.74□□□□□ -0.21
LIN54-201ENST00000340417 KCNK3O14649 394 aa13.73□□□□□ -0.21
LIN54-201ENST00000340417 GNRH1P01148 92 aa13.73□□□□□ -0.21
LIN54-201ENST00000340417 SSTR3P32745 418 aaPredicted RBP13.73□□□□□ -0.21
LIN54-201ENST00000340417 CFAP157Q5JU67 520 aa13.73□□□□□ -0.21
LIN54-201ENST00000340417 UBLCP1Q8WVY7 318 aaPredicted RBP13.73□□□□□ -0.21
LIN54-201ENST00000340417 SPON2Q9BUD6 331 aa13.73□□□□□ -0.21
LIN54-201ENST00000340417 POLR3CQ9BUI4 534 aaPredicted RBP13.73□□□□□ -0.21
LIN54-201ENST00000340417 TARS2Q9BW92 718 aaKnown RBP13.73□□□□□ -0.21
LIN54-201ENST00000340417 ABI2Q9NYB9 513 aaPredicted RBP13.73□□□□□ -0.21
LIN54-201ENST00000340417 CWC15Q9P013 229 aaKnown RBP13.73□□□□□ -0.21
LIN54-201ENST00000340417 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.73□□□□□ -0.21
LIN54-201ENST00000340417 INHAP05111 366 aa13.73□□□□□ -0.21
LIN54-201ENST00000340417 GNA15P30679 374 aa13.73□□□□□ -0.21
LIN54-201ENST00000340417 PNPLA4P41247 253 aa13.73□□□□□ -0.21
LIN54-201ENST00000340417 RAD51Q06609 339 aa13.73□□□□□ -0.21
LIN54-201ENST00000340417 CRHR2Q13324 411 aa13.73□□□□□ -0.21
LIN54-201ENST00000340417 TMEM132BQ14DG7 1078 aa13.73□□□□□ -0.21
LIN54-201ENST00000340417 DPCR1Q3MIW9 517 aa13.73□□□□□ -0.21
LIN54-201ENST00000340417 HSPH1Q92598 858 aa13.73□□□□□ -0.21
LIN54-201ENST00000340417 CPB2Q96IY4 423 aa13.73□□□□□ -0.21
LIN54-201ENST00000340417 TTC25Q96NG3 672 aa13.73□□□□□ -0.21
LIN54-201ENST00000340417 FBXL21Q9UKT6 434 aa13.73□□□□□ -0.21
LIN54-201ENST00000340417 A0A087WZ62 844 aa13.73□□□□□ -0.21
LIN54-201ENST00000340417 FDXACB1Q9BRP7 624 aaPredicted RBP13.73□□□□□ -0.21
LIN54-201ENST00000340417 SCINQ9Y6U3 715 aa13.73□□□□□ -0.21
LIN54-201ENST00000340417 SART1O43290 800 aaKnown RBP13.73□□□□□ -0.21
LIN54-201ENST00000340417 DYNLT1P63172 113 aa13.73□□□□□ -0.21
LIN54-201ENST00000340417 ADAM22Q9P0K1 906 aa13.73□□□□□ -0.21
LIN54-201ENST00000340417 THP07101 528 aa13.73□□□□□ -0.21
LIN54-201ENST00000340417 HMBSP08397 361 aa13.73□□□□□ -0.21
LIN54-201ENST00000340417 NR1H3Q13133 447 aa13.73□□□□□ -0.21
LIN54-201ENST00000340417 KCNB1Q14721 858 aa13.73□□□□□ -0.21
LIN54-201ENST00000340417 CTU1Q7Z7A3 348 aaKnown RBP13.73□□□□□ -0.21
LIN54-201ENST00000340417 DAGLBQ8NCG7 672 aa13.73□□□□□ -0.21
LIN54-201ENST00000340417 FBXL13Q8NEE6 735 aa13.73□□□□□ -0.21
LIN54-201ENST00000340417 EMSYQ7Z589 1322 aa13.73□□□□□ -0.21
LIN54-201ENST00000340417 F8W8V4 182 aa13.72□□□□□ -0.21
LIN54-201ENST00000340417 GPR25O00155 361 aa13.72□□□□□ -0.21
LIN54-201ENST00000340417 CYP11B2P19099 503 aa13.72□□□□□ -0.21
LIN54-201ENST00000340417 LGSNQ5TDP6 509 aa13.72□□□□□ -0.21
LIN54-201ENST00000340417 PALM2Q8IXS6 379 aa13.72□□□□□ -0.21
LIN54-201ENST00000340417 PDCD6IPQ8WUM4 868 aaKnown RBP13.72□□□□□ -0.21
LIN54-201ENST00000340417 SLITRK1Q96PX8 696 aa13.72□□□□□ -0.21
LIN54-201ENST00000340417 MFSD1Q9H3U5 465 aa13.72□□□□□ -0.21
LIN54-201ENST00000340417 ZWILCHQ9H900 591 aa13.72□□□□□ -0.21
LIN54-201ENST00000340417 CYP39A1Q9NYL5 469 aa13.72□□□□□ -0.21
LIN54-201ENST00000340417 SLC4A7Q9Y6M7 1214 aa13.72□□□□□ -0.21
LIN54-201ENST00000340417 SCP2P22307 547 aa13.72□□□□□ -0.21
LIN54-201ENST00000340417 MAN1A1P33908 653 aa13.72□□□□□ -0.21
LIN54-201ENST00000340417 CDK17Q00537 523 aa13.72□□□□□ -0.21
LIN54-201ENST00000340417 CFAP221Q4G0U5 840 aa13.72□□□□□ -0.21
LIN54-201ENST00000340417 CATSPER3Q86XQ3 398 aa13.72□□□□□ -0.21
LIN54-201ENST00000340417 LGALS2P05162 132 aa13.72□□□□□ -0.21
LIN54-201ENST00000340417 RHOXF2BP0C7M4 288 aa13.72□□□□□ -0.21
LIN54-201ENST00000340417 TRIM49P0CI25 452 aa13.72□□□□□ -0.21
LIN54-201ENST00000340417 TRIM49CP0CI26 452 aa13.72□□□□□ -0.21
LIN54-201ENST00000340417 PPP6R3Q5H9R7 873 aaPredicted RBP13.72□□□□□ -0.21
LIN54-201ENST00000340417 MOXD1Q6UVY6 613 aa13.72□□□□□ -0.21
LIN54-201ENST00000340417 RHOXF2Q9BQY4 288 aa13.72□□□□□ -0.21
LIN54-201ENST00000340417 SIK2Q9H0K1 926 aa13.72□□□□□ -0.21
LIN54-201ENST00000340417 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.72□□□□□ -0.21
LIN54-201ENST00000340417 TMEM63CQ9P1W3 806 aa13.72□□□□□ -0.21
LIN54-201ENST00000340417 MCF2LO15068 1137 aa13.72□□□□□ -0.21
LIN54-201ENST00000340417 TLL1O43897 1013 aa13.72□□□□□ -0.21
LIN54-201ENST00000340417 SDC4P31431 198 aa13.72□□□□□ -0.21
LIN54-201ENST00000340417 ELAVL2Q12926 359 aaKnown RBP13.72□□□□□ -0.21
LIN54-201ENST00000340417 CTXN3Q4LDR2 81 aa13.72□□□□□ -0.21
LIN54-201ENST00000340417 KCTD17Q8N5Z5 321 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms