RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 ZNF280BQ86YH2 543 aa16.13■□□□□ 0.17
ERCC1-203ENST00000340192 KCTD17Q8N5Z5 321 aa16.13■□□□□ 0.17
ERCC1-203ENST00000340192 PPP2R3CQ969Q6 453 aa16.13■□□□□ 0.17
ERCC1-203ENST00000340192 DRC1Q96MC2 740 aa16.13■□□□□ 0.17
ERCC1-203ENST00000340192 APOL6Q9BWW8 343 aa16.13■□□□□ 0.17
ERCC1-203ENST00000340192 NRDE2Q9H7Z3 1164 aa16.13■□□□□ 0.17
ERCC1-203ENST00000340192 KANSL3Q9P2N6 904 aa16.13■□□□□ 0.17
ERCC1-203ENST00000340192 DNAJB4Q9UDY4 337 aa16.13■□□□□ 0.17
ERCC1-203ENST00000340192 PUF60Q9UHX1 559 aaKnown RBP16.13■□□□□ 0.17
ERCC1-203ENST00000340192 ARL5CA6NH57 179 aa16.12■□□□□ 0.17
ERCC1-203ENST00000340192 CCDC169A6NNP5 214 aa16.12■□□□□ 0.17
ERCC1-203ENST00000340192 H3BQ06 376 aaPredicted RBP16.12■□□□□ 0.17
ERCC1-203ENST00000340192 ACKR2O00590 384 aa16.12■□□□□ 0.17
ERCC1-203ENST00000340192 FSCN2O14926 492 aa16.12■□□□□ 0.17
ERCC1-203ENST00000340192 LINC01565O15544 149 aa16.12■□□□□ 0.17
ERCC1-203ENST00000340192 SLC26A4O43511 780 aa16.12■□□□□ 0.17
ERCC1-203ENST00000340192 B4GALT3O60512 393 aa16.12■□□□□ 0.17
ERCC1-203ENST00000340192 POMCP01189 267 aa16.12■□□□□ 0.17
ERCC1-203ENST00000340192 EDN1P05305 212 aa16.12■□□□□ 0.17
ERCC1-203ENST00000340192 PLA2G4BP0C869 781 aa16.12■□□□□ 0.17
ERCC1-203ENST00000340192 GUCY2CP25092 1073 aa16.12■□□□□ 0.17
ERCC1-203ENST00000340192 LTBRP36941 435 aa16.12■□□□□ 0.17
ERCC1-203ENST00000340192 MLH1P40692 756 aa16.12■□□□□ 0.17
ERCC1-203ENST00000340192 NRIP1P48552 1158 aa16.12■□□□□ 0.17
ERCC1-203ENST00000340192 EFNA5P52803 228 aa16.12■□□□□ 0.17
ERCC1-203ENST00000340192 SLC12A3P55017 1021 aa16.12■□□□□ 0.17
ERCC1-203ENST00000340192 PEX3P56589 373 aa16.12■□□□□ 0.17
ERCC1-203ENST00000340192 CEBPZQ03701 1054 aaKnown RBP16.12■□□□□ 0.17
ERCC1-203ENST00000340192 RAD51AP2Q09MP3 1159 aa16.12■□□□□ 0.17
ERCC1-203ENST00000340192 MAPK7Q13164 816 aa16.12■□□□□ 0.17
ERCC1-203ENST00000340192 PTPAQ15257 358 aa16.12■□□□□ 0.17
ERCC1-203ENST00000340192 TMEM132AQ24JP5 1023 aa16.12■□□□□ 0.17
ERCC1-203ENST00000340192 PDE12Q6L8Q7 609 aaKnown RBP16.12■□□□□ 0.17
ERCC1-203ENST00000340192 TMEM173Q86WV6 379 aaPredicted RBP16.12■□□□□ 0.17
ERCC1-203ENST00000340192 SYT2Q8N9I0 419 aaPredicted RBP16.12■□□□□ 0.17
ERCC1-203ENST00000340192 CALML4Q96GE6 196 aa16.12■□□□□ 0.17
ERCC1-203ENST00000340192 TIPINQ9BVW5 301 aa16.12■□□□□ 0.17
ERCC1-203ENST00000340192 ZSCAN16Q9H4T2 348 aaPredicted RBP16.12■□□□□ 0.17
ERCC1-203ENST00000340192 PDZD7Q9H5P4 517 aa16.12■□□□□ 0.17
ERCC1-203ENST00000340192 ENTPD7Q9NQZ7 604 aa16.12■□□□□ 0.17
ERCC1-203ENST00000340192 USP20Q9Y2K6 914 aa16.12■□□□□ 0.17
ERCC1-203ENST00000340192 N4BP3O15049 544 aa16.11■□□□□ 0.17
ERCC1-203ENST00000340192 INPPL1O15357 1258 aa16.11■□□□□ 0.17
ERCC1-203ENST00000340192 DDHD2O94830 711 aa16.11■□□□□ 0.17
ERCC1-203ENST00000340192 GALTP07902 379 aa16.11■□□□□ 0.17
ERCC1-203ENST00000340192 AKAP5P24588 427 aa16.11■□□□□ 0.17
ERCC1-203ENST00000340192 MARCKSP29966 332 aaPredicted RBP16.11■□□□□ 0.17
ERCC1-203ENST00000340192 NPTX2P47972 431 aa16.11■□□□□ 0.17
ERCC1-203ENST00000340192 SLC11A1P49279 550 aa16.11■□□□□ 0.17
ERCC1-203ENST00000340192 DMP1Q13316 513 aaPredicted RBP16.11■□□□□ 0.17
ERCC1-203ENST00000340192 ADAM15Q13444 863 aa16.11■□□□□ 0.17
ERCC1-203ENST00000340192 PLPP4Q5VZY2 271 aa16.11■□□□□ 0.17
ERCC1-203ENST00000340192 HACE1Q8IYU2 909 aa16.11■□□□□ 0.17
ERCC1-203ENST00000340192 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.11■□□□□ 0.17
ERCC1-203ENST00000340192 TMEM169Q96HH4 297 aa16.11■□□□□ 0.17
ERCC1-203ENST00000340192 ZFP42Q96MM3 310 aa16.11■□□□□ 0.17
ERCC1-203ENST00000340192 NECAB3Q96P71 396 aaPredicted RBP16.11■□□□□ 0.17
ERCC1-203ENST00000340192 FAM193BQ96PV7 902 aaPredicted RBP16.11■□□□□ 0.17
ERCC1-203ENST00000340192 UHRF1Q96T88 793 aaPredicted RBP16.11■□□□□ 0.17
ERCC1-203ENST00000340192 GAD1Q99259 594 aa16.11■□□□□ 0.17
ERCC1-203ENST00000340192 TCF25Q9BQ70 676 aa16.11■□□□□ 0.17
ERCC1-203ENST00000340192 TLE6Q9H808 572 aa16.11■□□□□ 0.17
ERCC1-203ENST00000340192 CARNS1A5YM72 827 aa16.1■□□□□ 0.17
ERCC1-203ENST00000340192 SFI1A8K8P3 1242 aa16.1■□□□□ 0.17
ERCC1-203ENST00000340192 K7ERI5 159 aa16.1■□□□□ 0.17
ERCC1-203ENST00000340192 PER2O15055 1255 aa16.1■□□□□ 0.17
ERCC1-203ENST00000340192 HSP90AA1P07900 732 aaKnown RBP16.1■□□□□ 0.17
ERCC1-203ENST00000340192 PLCG1P19174 1290 aa16.1■□□□□ 0.17
ERCC1-203ENST00000340192 DLX2Q07687 328 aaPredicted RBP16.1■□□□□ 0.17
ERCC1-203ENST00000340192 KARSQ15046 597 aaKnown RBP16.1■□□□□ 0.17
ERCC1-203ENST00000340192 TMC7Q7Z402 723 aa16.1■□□□□ 0.17
ERCC1-203ENST00000340192 EFHBQ8N7U6 833 aa16.1■□□□□ 0.17
ERCC1-203ENST00000340192 RASSF8Q8NHQ8 419 aa16.1■□□□□ 0.17
ERCC1-203ENST00000340192 LRRC15Q8TF66 581 aa16.1■□□□□ 0.17
ERCC1-203ENST00000340192 BCL7CQ8WUZ0 217 aaPredicted RBP16.1■□□□□ 0.17
ERCC1-203ENST00000340192 IGSF21Q96ID5 467 aa16.1■□□□□ 0.17
ERCC1-203ENST00000340192 C17orf75Q9HAS0 396 aa16.1■□□□□ 0.17
ERCC1-203ENST00000340192 NGRNQ9NPE2 291 aaKnown RBP16.1■□□□□ 0.17
ERCC1-203ENST00000340192 KCND2Q9NZV8 630 aa16.1■□□□□ 0.17
ERCC1-203ENST00000340192 FBXO2Q9UK22 296 aaPredicted RBP16.1■□□□□ 0.17
ERCC1-203ENST00000340192 GIT1Q9Y2X7 761 aa16.1■□□□□ 0.17
ERCC1-203ENST00000340192 NPHP3-ACAD11A0A0J9YXS1 232 aa16.09■□□□□ 0.17
ERCC1-203ENST00000340192 HIDE1A8MVS5 230 aa16.09■□□□□ 0.17
ERCC1-203ENST00000340192 TBX10O75333 385 aa16.09■□□□□ 0.17
ERCC1-203ENST00000340192 SCNN1GP51170 649 aa16.09■□□□□ 0.17
ERCC1-203ENST00000340192 ARSHQ5FYA8 562 aa16.09■□□□□ 0.17
ERCC1-203ENST00000340192 SPECC1Q5M775 1068 aa16.09■□□□□ 0.17
ERCC1-203ENST00000340192 NT5DC1Q5TFE4 455 aa16.09■□□□□ 0.17
ERCC1-203ENST00000340192 ATF7IP2Q5U623 682 aa16.09■□□□□ 0.17
ERCC1-203ENST00000340192 PTCRAQ6ISU1 281 aaPredicted RBP16.09■□□□□ 0.17
ERCC1-203ENST00000340192 USP49Q70CQ1 688 aa16.09■□□□□ 0.17
ERCC1-203ENST00000340192 EPSTI1Q96J88 318 aa16.09■□□□□ 0.17
ERCC1-203ENST00000340192 USP28Q96RU2 1077 aa16.09■□□□□ 0.17
ERCC1-203ENST00000340192 ADPGKQ9BRR6 497 aa16.09■□□□□ 0.17
ERCC1-203ENST00000340192 KMT5AQ9NQR1 393 aa16.09■□□□□ 0.17
ERCC1-203ENST00000340192 BLOC1S4Q9NUP1 217 aa16.09■□□□□ 0.17
ERCC1-203ENST00000340192 MIOSQ9NXC5 875 aa16.09■□□□□ 0.17
ERCC1-203ENST00000340192 KLK14Q9P0G3 267 aa16.09■□□□□ 0.17
ERCC1-203ENST00000340192 ARHGAP28Q9P2N2 729 aa16.09■□□□□ 0.17
ERCC1-203ENST00000340192 PARP2Q9UGN5 583 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms