RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 STAM2O75886 525 aa16.76■□□□□ 0.27
MBD1-203ENST00000339998 TBC1D8O95759 1140 aa16.76■□□□□ 0.27
MBD1-203ENST00000339998 GALCP54803 685 aa16.76■□□□□ 0.27
MBD1-203ENST00000339998 NLRP11P59045 1033 aaKnown RBP16.76■□□□□ 0.27
MBD1-203ENST00000339998 SLC7A5Q01650 507 aa16.76■□□□□ 0.27
MBD1-203ENST00000339998 CDR2LQ86X02 465 aaPredicted RBP16.76■□□□□ 0.27
MBD1-203ENST00000339998 PPP1R13LQ8WUF5 828 aa16.76■□□□□ 0.27
MBD1-203ENST00000339998 SLC10A4Q96EP9 437 aa16.76■□□□□ 0.27
MBD1-203ENST00000339998 IFT74Q96LB3 600 aa16.76■□□□□ 0.27
MBD1-203ENST00000339998 KREMEN1Q96MU8 473 aa16.76■□□□□ 0.27
MBD1-203ENST00000339998 CEP89Q96ST8 783 aa16.76■□□□□ 0.27
MBD1-203ENST00000339998 PPP1R16BQ96T49 567 aa16.76■□□□□ 0.27
MBD1-203ENST00000339998 ARGLU1Q9NWB6 273 aaPredicted RBP16.76■□□□□ 0.27
MBD1-203ENST00000339998 ARHGAP28Q9P2N2 729 aa16.76■□□□□ 0.27
MBD1-203ENST00000339998 ZNFX1Q9P2E3 1918 aaKnown RBP16.75■□□□□ 0.27
MBD1-203ENST00000339998 KCTD2Q14681 263 aa16.75■□□□□ 0.27
MBD1-203ENST00000339998 FBXL5Q9UKA1 691 aa16.75■□□□□ 0.27
MBD1-203ENST00000339998 SGPL1O95470 568 aa16.75■□□□□ 0.27
MBD1-203ENST00000339998 C12orf56Q8IXR9 622 aa16.75■□□□□ 0.27
MBD1-203ENST00000339998 SPIRE2Q8WWL2 714 aa16.75■□□□□ 0.27
MBD1-203ENST00000339998 ZNF516Q92618 1163 aa16.75■□□□□ 0.27
MBD1-203ENST00000339998 ARHGEF26Q96DR7 871 aa16.75■□□□□ 0.27
MBD1-203ENST00000339998 TIPINQ9BVW5 301 aa16.75■□□□□ 0.27
MBD1-203ENST00000339998 DHX33Q9H6R0 707 aaKnown RBP16.75■□□□□ 0.27
MBD1-203ENST00000339998 PTPRJQ12913 1337 aa16.75■□□□□ 0.27
MBD1-203ENST00000339998 CYP26A1O43174 497 aa16.74■□□□□ 0.27
MBD1-203ENST00000339998 CSDE1O75534 798 aaKnown RBP16.74■□□□□ 0.27
MBD1-203ENST00000339998 SRGAP2CP0DJJ0 459 aa16.74■□□□□ 0.27
MBD1-203ENST00000339998 FERP16591 822 aa16.74■□□□□ 0.27
MBD1-203ENST00000339998 LIG4P49917 911 aa16.74■□□□□ 0.27
MBD1-203ENST00000339998 ERVK-9P63128 1117 aa16.74■□□□□ 0.27
MBD1-203ENST00000339998 SLC7A3Q8WY07 619 aa16.74■□□□□ 0.27
MBD1-203ENST00000339998 PDE11AQ9HCR9 933 aa16.74■□□□□ 0.27
MBD1-203ENST00000339998 EXOC7Q9UPT5 735 aa16.74■□□□□ 0.27
MBD1-203ENST00000339998 LONRF2Q1L5Z9 754 aa16.74■□□□□ 0.27
MBD1-203ENST00000339998 SPOPLQ6IQ16 392 aa16.74■□□□□ 0.27
MBD1-203ENST00000339998 SV2AQ7L0J3 742 aa16.74■□□□□ 0.27
MBD1-203ENST00000339998 ARMC9Q7Z3E5 817 aa16.74■□□□□ 0.27
MBD1-203ENST00000339998 SLC47A2Q86VL8 602 aa16.74■□□□□ 0.27
MBD1-203ENST00000339998 TMEM130Q8N3G9 435 aa16.74■□□□□ 0.27
MBD1-203ENST00000339998 MYBL2P10244 700 aa16.74■□□□□ 0.27
MBD1-203ENST00000339998 SLC30A5Q8TAD4 765 aa16.74■□□□□ 0.27
MBD1-203ENST00000339998 PRPF31Q8WWY3 499 aaKnown RBP16.74■□□□□ 0.27
MBD1-203ENST00000339998 A0A0G2JMZ2 1700 aa16.73■□□□□ 0.27
MBD1-203ENST00000339998 IGKV6D-21A0A0A0MT36 114 aa16.73■□□□□ 0.27
MBD1-203ENST00000339998 SSTR3P32745 418 aaPredicted RBP16.73■□□□□ 0.27
MBD1-203ENST00000339998 PLA2G4AP47712 749 aa16.73■□□□□ 0.27
MBD1-203ENST00000339998 CYP24A1Q07973 514 aa16.73■□□□□ 0.27
MBD1-203ENST00000339998 MKRN4PQ13434 485 aaPredicted RBP16.73■□□□□ 0.27
MBD1-203ENST00000339998 TUBB2AQ13885 445 aa16.73■□□□□ 0.27
MBD1-203ENST00000339998 CAPSQ13938 189 aa16.73■□□□□ 0.27
MBD1-203ENST00000339998 MYBPC2Q14324 1141 aa16.73■□□□□ 0.27
MBD1-203ENST00000339998 MSANTD4Q8NCY6 345 aa16.73■□□□□ 0.27
MBD1-203ENST00000339998 DEPTORQ8TB45 409 aa16.73■□□□□ 0.27
MBD1-203ENST00000339998 TUBB2BQ9BVA1 445 aa16.73■□□□□ 0.27
MBD1-203ENST00000339998 THAP2Q9H0W7 228 aa16.73■□□□□ 0.27
MBD1-203ENST00000339998 ARFGAP3Q9NP61 516 aa16.73■□□□□ 0.27
MBD1-203ENST00000339998 OGFRQ9NZT2 677 aa16.73■□□□□ 0.27
MBD1-203ENST00000339998 NENFQ9UMX5 172 aa16.73■□□□□ 0.27
MBD1-203ENST00000339998 BZW2Q9Y6E2 419 aaKnown RBP16.73■□□□□ 0.27
MBD1-203ENST00000339998 LOC285556D6RIA3 1793 aa16.73■□□□□ 0.27
MBD1-203ENST00000339998 K7ERI5 159 aa16.73■□□□□ 0.27
MBD1-203ENST00000339998 NOP56O00567 594 aaKnown RBP16.73■□□□□ 0.27
MBD1-203ENST00000339998 ATMINO43313 823 aaPredicted RBP16.73■□□□□ 0.27
MBD1-203ENST00000339998 H2AFZP0C0S5 128 aa16.73■□□□□ 0.27
MBD1-203ENST00000339998 METTL7BQ6UX53 244 aa16.73■□□□□ 0.27
MBD1-203ENST00000339998 H2AFVQ71UI9 128 aa16.73■□□□□ 0.27
MBD1-203ENST00000339998 ZBTB33Q86T24 672 aa16.73■□□□□ 0.27
MBD1-203ENST00000339998 RNF10Q8N5U6 811 aaKnown RBP16.73■□□□□ 0.27
MBD1-203ENST00000339998 SEPT1Q8WYJ6 367 aa16.73■□□□□ 0.27
MBD1-203ENST00000339998 SPATA33Q96N06 139 aa16.73■□□□□ 0.27
MBD1-203ENST00000339998 SYT11Q9BT88 431 aa16.73■□□□□ 0.27
MBD1-203ENST00000339998 LRRC1Q9BTT6 524 aa16.73■□□□□ 0.27
MBD1-203ENST00000339998 RBM12Q9NTZ6 932 aaKnown RBP16.73■□□□□ 0.27
MBD1-203ENST00000339998 DMGDHQ9UI17 866 aaKnown RBP16.73■□□□□ 0.27
MBD1-203ENST00000339998 EVPLQ92817 2033 aa16.72■□□□□ 0.27
MBD1-203ENST00000339998 DKC1O60832 514 aaKnown RBP eCLIP16.72■□□□□ 0.27
MBD1-203ENST00000339998 CLSTN1O94985 981 aa16.72■□□□□ 0.27
MBD1-203ENST00000339998 TNFAIP3P21580 790 aa16.72■□□□□ 0.27
MBD1-203ENST00000339998 IGBP1P78318 339 aa16.72■□□□□ 0.27
MBD1-203ENST00000339998 LDLRAD1Q5T700 205 aa16.72■□□□□ 0.27
MBD1-203ENST00000339998 GPD1LQ8N335 351 aa16.72■□□□□ 0.27
MBD1-203ENST00000339998 SPATA4Q8NEY3 305 aa16.72■□□□□ 0.27
MBD1-203ENST00000339998 ZC3H15Q8WU90 426 aaKnown RBP16.72■□□□□ 0.27
MBD1-203ENST00000339998 PCDHB18PQ96TA0 734 aa16.72■□□□□ 0.27
MBD1-203ENST00000339998 GPR20Q99678 358 aa16.72■□□□□ 0.27
MBD1-203ENST00000339998 PCDHGC5Q9Y5F6 944 aa16.72■□□□□ 0.27
MBD1-203ENST00000339998 TXNP10599 105 aaKnown RBP16.72■□□□□ 0.27
MBD1-203ENST00000339998 NEDD9Q14511 834 aa16.72■□□□□ 0.27
MBD1-203ENST00000339998 BMS1Q14692 1282 aaKnown RBP16.72■□□□□ 0.27
MBD1-203ENST00000339998 CCDC181Q5TID7 509 aa16.72■□□□□ 0.27
MBD1-203ENST00000339998 KRT39Q6A163 491 aa16.72■□□□□ 0.27
MBD1-203ENST00000339998 ZCCHC17Q9NP64 241 aaKnown RBP16.72■□□□□ 0.27
MBD1-203ENST00000339998 LUC7LQ9NQ29 371 aaKnown RBP16.72■□□□□ 0.27
MBD1-203ENST00000339998 DNAJC25-GNG10A0A024R161 153 aa16.71■□□□□ 0.27
MBD1-203ENST00000339998 OSBPP22059 807 aa16.71■□□□□ 0.27
MBD1-203ENST00000339998 ARL2P36404 184 aa16.71■□□□□ 0.27
MBD1-203ENST00000339998 CRELD2Q6UXH1 353 aaPredicted RBP16.71■□□□□ 0.27
MBD1-203ENST00000339998 NOP9Q86U38 636 aaKnown RBP16.71■□□□□ 0.27
MBD1-203ENST00000339998 RPUSD2Q8IZ73 545 aaKnown RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms