RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 POTEEQ6S8J3 1075 aa10.08□□□□□ -0.8
NECAP1-201ENST00000339754 BICDL1Q6ZP65 573 aa10.08□□□□□ -0.8
NECAP1-201ENST00000339754 C4orf50Q6ZRC1 276 aa10.08□□□□□ -0.8
NECAP1-201ENST00000339754 ARHGEF18Q6ZSZ5 1173 aa10.08□□□□□ -0.8
NECAP1-201ENST00000339754 SEPT14Q6ZU15 432 aa10.08□□□□□ -0.8
NECAP1-201ENST00000339754 CYFIP1Q7L576 1253 aa10.08□□□□□ -0.8
NECAP1-201ENST00000339754 FRMD5Q7Z6J6 570 aa10.08□□□□□ -0.8
NECAP1-201ENST00000339754 NCAPG2Q86XI2 1143 aa10.08□□□□□ -0.8
NECAP1-201ENST00000339754 GLYCTKQ8IVS8 523 aa10.08□□□□□ -0.8
NECAP1-201ENST00000339754 NCSTNQ92542 709 aa10.08□□□□□ -0.8
NECAP1-201ENST00000339754 NDNQ99608 321 aa10.08□□□□□ -0.8
NECAP1-201ENST00000339754 CDCA7Q9BWT1 371 aaPredicted RBP10.08□□□□□ -0.8
NECAP1-201ENST00000339754 FAM192AQ9GZU8 254 aa10.08□□□□□ -0.8
NECAP1-201ENST00000339754 CPVLQ9H3G5 476 aa10.08□□□□□ -0.8
NECAP1-201ENST00000339754 ZWILCHQ9H900 591 aa10.08□□□□□ -0.8
NECAP1-201ENST00000339754 TMEM260Q9NX78 707 aa10.08□□□□□ -0.8
NECAP1-201ENST00000339754 BIN2Q9UBW5 565 aaPredicted RBP10.08□□□□□ -0.8
NECAP1-201ENST00000339754 ALG6Q9Y672 507 aa10.08□□□□□ -0.8
NECAP1-201ENST00000339754 ZNF804BA4D1E1 1349 aa10.08□□□□□ -0.8
NECAP1-201ENST00000339754 SPATA31A5Q5VU36 1347 aa10.08□□□□□ -0.8
NECAP1-201ENST00000339754 SPATA31A7Q8IWB4 1347 aa10.08□□□□□ -0.8
NECAP1-201ENST00000339754 MAGEA13PA6NCF6 341 aa10.08□□□□□ -0.8
NECAP1-201ENST00000339754 ZSCAN9O15535 394 aaPredicted RBP10.08□□□□□ -0.8
NECAP1-201ENST00000339754 CBX6O95503 412 aa10.08□□□□□ -0.8
NECAP1-201ENST00000339754 CETPP11597 493 aa10.08□□□□□ -0.8
NECAP1-201ENST00000339754 SKIP12755 728 aa10.08□□□□□ -0.8
NECAP1-201ENST00000339754 HSPA6P17066 643 aa10.08□□□□□ -0.8
NECAP1-201ENST00000339754 CTTNQ14247 550 aaKnown RBP10.08□□□□□ -0.8
NECAP1-201ENST00000339754 SBK1Q52WX2 424 aa10.08□□□□□ -0.8
NECAP1-201ENST00000339754 RFWD3Q6PCD5 774 aa10.08□□□□□ -0.8
NECAP1-201ENST00000339754 KRT35Q92764 455 aa10.08□□□□□ -0.8
NECAP1-201ENST00000339754 SYT11Q9BT88 431 aa10.08□□□□□ -0.8
NECAP1-201ENST00000339754 PPP1R12CQ9BZL4 782 aa10.08□□□□□ -0.8
NECAP1-201ENST00000339754 NT5C3AQ9H0P0 336 aa10.08□□□□□ -0.8
NECAP1-201ENST00000339754 C6orf50Q9HD87 102 aa10.08□□□□□ -0.8
NECAP1-201ENST00000339754 NPHP3-ACAD11A0A0J9YXS1 232 aa10.07□□□□□ -0.8
NECAP1-201ENST00000339754 TCRBV7S2A1N4TA0A589 114 aa10.07□□□□□ -0.8
NECAP1-201ENST00000339754 WTIPA6NIX2 430 aaPredicted RBP10.07□□□□□ -0.8
NECAP1-201ENST00000339754 CREB3O43889 395 aa10.07□□□□□ -0.8
NECAP1-201ENST00000339754 LGR5O75473 907 aa10.07□□□□□ -0.8
NECAP1-201ENST00000339754 TCEA3O75764 348 aa10.07□□□□□ -0.8
NECAP1-201ENST00000339754 CYP1A1P04798 512 aaPredicted RBP10.07□□□□□ -0.8
NECAP1-201ENST00000339754 GOLGA8HP0CJ92 632 aa10.07□□□□□ -0.8
NECAP1-201ENST00000339754 ABCB4P21439 1286 aa10.07□□□□□ -0.8
NECAP1-201ENST00000339754 KCNA3P22001 575 aa10.07□□□□□ -0.8
NECAP1-201ENST00000339754 NR2F2P24468 414 aa10.07□□□□□ -0.8
NECAP1-201ENST00000339754 MARK3P27448 753 aa10.07□□□□□ -0.8
NECAP1-201ENST00000339754 PTPN4P29074 926 aa10.07□□□□□ -0.8
NECAP1-201ENST00000339754 GNA11P29992 359 aa10.07□□□□□ -0.8
NECAP1-201ENST00000339754 COILP38432 576 aaPredicted RBP10.07□□□□□ -0.8
NECAP1-201ENST00000339754 IGHMBP2P38935 993 aaKnown RBP10.07□□□□□ -0.8
NECAP1-201ENST00000339754 STRN3Q13033 797 aa10.07□□□□□ -0.8
NECAP1-201ENST00000339754 TNIP1Q15025 636 aa10.07□□□□□ -0.8
NECAP1-201ENST00000339754 CYP1B1Q16678 543 aa10.07□□□□□ -0.8
NECAP1-201ENST00000339754 TMEM266Q2M3C6 531 aa10.07□□□□□ -0.8
NECAP1-201ENST00000339754 TMEM63BQ5T3F8 832 aa10.07□□□□□ -0.8
NECAP1-201ENST00000339754 ZNF449Q6P9G9 518 aa10.07□□□□□ -0.8
NECAP1-201ENST00000339754 RBM12BQ8IXT5 1001 aaKnown RBP10.07□□□□□ -0.8
NECAP1-201ENST00000339754 MIPEPQ99797 713 aa10.07□□□□□ -0.8
NECAP1-201ENST00000339754 TAOK3Q9H2K8 898 aa10.07□□□□□ -0.8
NECAP1-201ENST00000339754 UBAP1LF5GYI3 381 aa10.07□□□□□ -0.8
NECAP1-201ENST00000339754 TDP2O95551 362 aa10.07□□□□□ -0.8
NECAP1-201ENST00000339754 TTC4O95801 387 aa10.07□□□□□ -0.8
NECAP1-201ENST00000339754 GYG1P46976 350 aa10.07□□□□□ -0.8
NECAP1-201ENST00000339754 KCNJ1P48048 391 aa10.07□□□□□ -0.8
NECAP1-201ENST00000339754 MARCKSL1P49006 195 aa10.07□□□□□ -0.8
NECAP1-201ENST00000339754 RASSF2P50749 326 aa10.07□□□□□ -0.8
NECAP1-201ENST00000339754 SESN3P58005 492 aa10.07□□□□□ -0.8
NECAP1-201ENST00000339754 HERC4Q5GLZ8 1057 aaPredicted RBP10.07□□□□□ -0.8
NECAP1-201ENST00000339754 RHBDF2Q6PJF5 856 aa10.07□□□□□ -0.8
NECAP1-201ENST00000339754 DSTYKQ6XUX3 929 aa10.07□□□□□ -0.8
NECAP1-201ENST00000339754 CTNNBL1Q8WYA6 563 aaPredicted RBP10.07□□□□□ -0.8
NECAP1-201ENST00000339754 OPTNQ96CV9 577 aa10.07□□□□□ -0.8
NECAP1-201ENST00000339754 POP1Q99575 1024 aaKnown RBP10.07□□□□□ -0.8
NECAP1-201ENST00000339754 THAP2Q9H0W7 228 aa10.07□□□□□ -0.8
NECAP1-201ENST00000339754 NKIRAS1Q9NYS0 192 aa10.07□□□□□ -0.8
NECAP1-201ENST00000339754 PDP2Q9P2J9 529 aa10.07□□□□□ -0.8
NECAP1-201ENST00000339754 LGALS13Q9UHV8 139 aa10.07□□□□□ -0.8
NECAP1-201ENST00000339754 PHTF1Q9UMS5 762 aa10.07□□□□□ -0.8
NECAP1-201ENST00000339754 NAALADL1Q9UQQ1 740 aa10.07□□□□□ -0.8
NECAP1-201ENST00000339754 NRAPQ86VF7 1730 aa10.06□□□□□ -0.8
NECAP1-201ENST00000339754 DOT1LQ8TEK3 1739 aa10.06□□□□□ -0.8
NECAP1-201ENST00000339754 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.06□□□□□ -0.8
NECAP1-201ENST00000339754 WNK3Q9BYP7 1800 aa10.06□□□□□ -0.8
NECAP1-201ENST00000339754 ADGRA3Q8IWK6 1321 aa10.06□□□□□ -0.8
NECAP1-201ENST00000339754 SYNGAP1Q96PV0 1343 aa10.06□□□□□ -0.8
NECAP1-201ENST00000339754 KLRF2D3W0D1 207 aa10.06□□□□□ -0.8
NECAP1-201ENST00000339754 PLSCR1O15162 318 aa10.06□□□□□ -0.8
NECAP1-201ENST00000339754 DCTN3O75935 186 aa10.06□□□□□ -0.8
NECAP1-201ENST00000339754 LMNB1P20700 586 aa10.06□□□□□ -0.8
NECAP1-201ENST00000339754 CHKAP35790 457 aa10.06□□□□□ -0.8
NECAP1-201ENST00000339754 SERPINB4P48594 390 aa10.06□□□□□ -0.8
NECAP1-201ENST00000339754 IL9RQ01113 521 aa10.06□□□□□ -0.8
NECAP1-201ENST00000339754 CHRNDQ07001 517 aa10.06□□□□□ -0.8
NECAP1-201ENST00000339754 ADCY1Q08828 1119 aa10.06□□□□□ -0.8
NECAP1-201ENST00000339754 MYBPC3Q14896 1274 aa10.06□□□□□ -0.8
NECAP1-201ENST00000339754 KYNUQ16719 465 aa10.06□□□□□ -0.8
NECAP1-201ENST00000339754 CNPY1Q3B7I2 92 aa10.06□□□□□ -0.8
NECAP1-201ENST00000339754 SPDYAQ5MJ70 313 aa10.06□□□□□ -0.8
NECAP1-201ENST00000339754 PPP1R21Q6ZMI0 780 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms