RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 ZYXQ15942 572 aaKnown RBP10.31□□□□□ -0.76
PTCHD4-201ENST00000339488 PDCD4Q53EL6 469 aaKnown RBP10.31□□□□□ -0.76
PTCHD4-201ENST00000339488 RBM26Q5T8P6 1007 aaKnown RBP10.31□□□□□ -0.76
PTCHD4-201ENST00000339488 Q6ZNX1 250 aa10.31□□□□□ -0.76
PTCHD4-201ENST00000339488 MB21D2Q8IYB1 491 aaPredicted RBP10.31□□□□□ -0.76
PTCHD4-201ENST00000339488 CPNE9Q8IYJ1 553 aa10.31□□□□□ -0.76
PTCHD4-201ENST00000339488 ZFP28Q8NHY6 868 aa10.31□□□□□ -0.76
PTCHD4-201ENST00000339488 SCFD2Q8WU76 684 aa10.31□□□□□ -0.76
PTCHD4-201ENST00000339488 CLPTM1LQ96KA5 538 aa10.31□□□□□ -0.76
PTCHD4-201ENST00000339488 NSMCE3Q96MG7 304 aa10.31□□□□□ -0.76
PTCHD4-201ENST00000339488 PABPC3Q9H361 631 aaKnown RBP10.31□□□□□ -0.76
PTCHD4-201ENST00000339488 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.31□□□□□ -0.76
PTCHD4-201ENST00000339488 CARD8Q9Y2G2 431 aa10.31□□□□□ -0.76
PTCHD4-201ENST00000339488 UTP11Q9Y3A2 253 aaKnown RBP10.31□□□□□ -0.76
PTCHD4-201ENST00000339488 RPTORQ8N122 1335 aa10.31□□□□□ -0.76
PTCHD4-201ENST00000339488 STRCP1A6NGW2 1772 aa10.31□□□□□ -0.76
PTCHD4-201ENST00000339488 CSPG5O95196 566 aa10.3□□□□□ -0.76
PTCHD4-201ENST00000339488 HOXD13P35453 343 aa10.3□□□□□ -0.76
PTCHD4-201ENST00000339488 UBE4AQ14139 1066 aa10.3□□□□□ -0.76
PTCHD4-201ENST00000339488 ZNF174Q15697 407 aa10.3□□□□□ -0.76
PTCHD4-201ENST00000339488 WASHC4Q2M389 1173 aa10.3□□□□□ -0.76
PTCHD4-201ENST00000339488 TMEM266Q2M3C6 531 aa10.3□□□□□ -0.76
PTCHD4-201ENST00000339488 LPCAT4Q643R3 524 aa10.3□□□□□ -0.76
PTCHD4-201ENST00000339488 UTS2BQ765I0 119 aa10.3□□□□□ -0.76
PTCHD4-201ENST00000339488 CSGALNACT2Q8N6G5 542 aa10.3□□□□□ -0.76
PTCHD4-201ENST00000339488 SCAIQ8N9R8 606 aa10.3□□□□□ -0.76
PTCHD4-201ENST00000339488 SH3RF3Q8TEJ3 882 aaPredicted RBP10.3□□□□□ -0.76
PTCHD4-201ENST00000339488 CKAP2Q8WWK9 683 aa10.3□□□□□ -0.76
PTCHD4-201ENST00000339488 INPP5DQ92835 1189 aa10.3□□□□□ -0.76
PTCHD4-201ENST00000339488 COG3Q96JB2 828 aa10.3□□□□□ -0.76
PTCHD4-201ENST00000339488 NAP1L3Q99457 506 aaPredicted RBP10.3□□□□□ -0.76
PTCHD4-201ENST00000339488 NAPBQ9H115 298 aa10.3□□□□□ -0.76
PTCHD4-201ENST00000339488 RNF14Q9UBS8 474 aa10.3□□□□□ -0.76
PTCHD4-201ENST00000339488 MAP3K2Q9Y2U5 619 aa10.3□□□□□ -0.76
PTCHD4-201ENST00000339488 SLC4A4Q9Y6R1 1079 aa10.3□□□□□ -0.76
PTCHD4-201ENST00000339488 BCL9LQ86UU0 1499 aa10.3□□□□□ -0.76
PTCHD4-201ENST00000339488 DIP2AQ14689 1571 aa10.3□□□□□ -0.76
PTCHD4-201ENST00000339488 FUOMA2VDF0 154 aa10.3□□□□□ -0.76
PTCHD4-201ENST00000339488 FUCA1P04066 466 aa10.3□□□□□ -0.76
PTCHD4-201ENST00000339488 RPN1P04843 607 aaKnown RBP10.3□□□□□ -0.76
PTCHD4-201ENST00000339488 MTFR1Q15390 333 aa10.3□□□□□ -0.76
PTCHD4-201ENST00000339488 MYLK3Q32MK0 819 aa10.3□□□□□ -0.76
PTCHD4-201ENST00000339488 PPP2R2DQ66LE6 453 aa10.3□□□□□ -0.76
PTCHD4-201ENST00000339488 CCDC174Q6PII3 467 aa10.3□□□□□ -0.76
PTCHD4-201ENST00000339488 MTDHQ86UE4 582 aaKnown RBP10.3□□□□□ -0.76
PTCHD4-201ENST00000339488 METTL13Q8N6R0 699 aa10.3□□□□□ -0.76
PTCHD4-201ENST00000339488 CXorf38Q8TB03 319 aa10.3□□□□□ -0.76
PTCHD4-201ENST00000339488 STARD8Q92502 1023 aa10.3□□□□□ -0.76
PTCHD4-201ENST00000339488 MCUR1Q96AQ8 359 aa10.3□□□□□ -0.76
PTCHD4-201ENST00000339488 DGCR14Q96DF8 476 aaKnown RBP10.3□□□□□ -0.76
PTCHD4-201ENST00000339488 ADAM33Q9BZ11 813 aa10.3□□□□□ -0.76
PTCHD4-201ENST00000339488 TXLNGYQ9BZA5 131 aa10.3□□□□□ -0.76
PTCHD4-201ENST00000339488 BHMT2Q9H2M3 363 aa10.3□□□□□ -0.76
PTCHD4-201ENST00000339488 RETREG1Q9H6L5 497 aa10.3□□□□□ -0.76
PTCHD4-201ENST00000339488 PPM1HQ9ULR3 514 aa10.3□□□□□ -0.76
PTCHD4-201ENST00000339488 PLAGL2Q9UPG8 496 aa10.3□□□□□ -0.76
PTCHD4-201ENST00000339488 GIT1Q9Y2X7 761 aa10.3□□□□□ -0.76
PTCHD4-201ENST00000339488 PCDHGA3Q9Y5H0 932 aa10.3□□□□□ -0.76
PTCHD4-201ENST00000339488 GPC6Q9Y625 555 aaPredicted RBP10.3□□□□□ -0.76
PTCHD4-201ENST00000339488 TECPR2O15040 1411 aa10.3□□□□□ -0.76
PTCHD4-201ENST00000339488 CPS1P31327 1500 aa10.3□□□□□ -0.76
PTCHD4-201ENST00000339488 ADCY6O43306 1168 aa10.29□□□□□ -0.76
PTCHD4-201ENST00000339488 ZBED1O96006 694 aa10.29□□□□□ -0.76
PTCHD4-201ENST00000339488 S100BP04271 92 aaPredicted RBP10.29□□□□□ -0.76
PTCHD4-201ENST00000339488 HIRAP54198 1017 aaPredicted RBP10.29□□□□□ -0.76
PTCHD4-201ENST00000339488 NOP14P78316 857 aaKnown RBP10.29□□□□□ -0.76
PTCHD4-201ENST00000339488 MSLNQ13421 630 aaPredicted RBP10.29□□□□□ -0.76
PTCHD4-201ENST00000339488 NCOA4Q13772 614 aa10.29□□□□□ -0.76
PTCHD4-201ENST00000339488 SFT2D3Q587I9 215 aa10.29□□□□□ -0.76
PTCHD4-201ENST00000339488 DCAF6Q58WW2 860 aa10.29□□□□□ -0.76
PTCHD4-201ENST00000339488 MIIPQ5JXC2 388 aa10.29□□□□□ -0.76
PTCHD4-201ENST00000339488 PRUNE1Q86TP1 453 aa10.29□□□□□ -0.76
PTCHD4-201ENST00000339488 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.29□□□□□ -0.76
PTCHD4-201ENST00000339488 DDX43Q9NXZ2 648 aaKnown RBP10.29□□□□□ -0.76
PTCHD4-201ENST00000339488 STX18Q9P2W9 335 aaKnown RBP10.29□□□□□ -0.76
PTCHD4-201ENST00000339488 COQ6Q9Y2Z9 468 aa10.29□□□□□ -0.76
PTCHD4-201ENST00000339488 E9PBE3 544 aa10.29□□□□□ -0.76
PTCHD4-201ENST00000339488 PGRMC1O00264 195 aaKnown RBP10.29□□□□□ -0.76
PTCHD4-201ENST00000339488 FBXO21O94952 628 aa10.29□□□□□ -0.76
PTCHD4-201ENST00000339488 SMIM18P0DKX4 95 aa10.29□□□□□ -0.76
PTCHD4-201ENST00000339488 BRAFP15056 766 aa10.29□□□□□ -0.76
PTCHD4-201ENST00000339488 TAC1P20366 129 aa10.29□□□□□ -0.76
PTCHD4-201ENST00000339488 PTPN4P29074 926 aa10.29□□□□□ -0.76
PTCHD4-201ENST00000339488 MAP3K10Q02779 954 aa10.29□□□□□ -0.76
PTCHD4-201ENST00000339488 FAM182AQ5T1J6 154 aa10.29□□□□□ -0.76
PTCHD4-201ENST00000339488 ZNF658Q5TYW1 1059 aaPredicted RBP10.29□□□□□ -0.76
PTCHD4-201ENST00000339488 OSTM1Q86WC4 334 aa10.29□□□□□ -0.76
PTCHD4-201ENST00000339488 RASSF3Q86WH2 238 aa10.29□□□□□ -0.76
PTCHD4-201ENST00000339488 NUP93Q8N1F7 819 aa10.29□□□□□ -0.76
PTCHD4-201ENST00000339488 BBS5Q8N3I7 341 aa10.29□□□□□ -0.76
PTCHD4-201ENST00000339488 FAM161BQ96MY7 647 aa10.29□□□□□ -0.76
PTCHD4-201ENST00000339488 NEUROD6Q96NK8 337 aa10.29□□□□□ -0.76
PTCHD4-201ENST00000339488 SNX25Q9H3E2 840 aa10.29□□□□□ -0.76
PTCHD4-201ENST00000339488 UBN1Q9NPG3 1134 aa10.29□□□□□ -0.76
PTCHD4-201ENST00000339488 SACM1LQ9NTJ5 587 aa10.29□□□□□ -0.76
PTCHD4-201ENST00000339488 ARL8BQ9NVJ2 186 aa10.29□□□□□ -0.76
PTCHD4-201ENST00000339488 ZFP69BQ9UJL9 534 aa10.29□□□□□ -0.76
PTCHD4-201ENST00000339488 DCTN4Q9UJW0 460 aa10.29□□□□□ -0.76
PTCHD4-201ENST00000339488 TRAF3IP3Q9Y228 551 aa10.29□□□□□ -0.76
PTCHD4-201ENST00000339488 SSX2IPQ9Y2D8 614 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms