RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 STMN1P16949 149 aa4.41□□□□□ -1.7
NEDD4-201ENST00000338963 ARFIP2P53365 341 aa4.41□□□□□ -1.7
NEDD4-201ENST00000338963 CDK18Q07002 472 aa4.41□□□□□ -1.7
NEDD4-201ENST00000338963 TJAP1Q5JTD0 557 aa4.41□□□□□ -1.7
NEDD4-201ENST00000338963 NEK5Q6P3R8 708 aa4.41□□□□□ -1.7
NEDD4-201ENST00000338963 ATP6V0D2Q8N8Y2 350 aa4.41□□□□□ -1.7
NEDD4-201ENST00000338963 TSEN2Q8NCE0 465 aaKnown RBP4.41□□□□□ -1.7
NEDD4-201ENST00000338963 PEX13Q92968 403 aa4.41□□□□□ -1.7
NEDD4-201ENST00000338963 NMD3Q96D46 503 aaKnown RBP4.41□□□□□ -1.7
NEDD4-201ENST00000338963 TRIM15Q9C019 465 aa4.41□□□□□ -1.7
NEDD4-201ENST00000338963 CUEDC2Q9H467 287 aa4.41□□□□□ -1.7
NEDD4-201ENST00000338963 PSTPIP2Q9H939 334 aa4.41□□□□□ -1.7
NEDD4-201ENST00000338963 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.41□□□□□ -1.75e-6■■■■□ 20.5
NEDD4-201ENST00000338963 HACD3Q9P035 362 aa4.41□□□□□ -1.7
NEDD4-201ENST00000338963 KIAA1522Q9P206 1035 aaPredicted RBP4.41□□□□□ -1.7
NEDD4-201ENST00000338963 ACTL7BQ9Y614 415 aa4.41□□□□□ -1.7
NEDD4-201ENST00000338963 ARHGEF10O15013 1369 aa4.41□□□□□ -1.7
NEDD4-201ENST00000338963 F8W031 263 aaPredicted RBP4.41□□□□□ -1.7
NEDD4-201ENST00000338963 ECDO95905 644 aaPredicted RBP4.41□□□□□ -1.7
NEDD4-201ENST00000338963 LDHCP07864 332 aa4.41□□□□□ -1.7
NEDD4-201ENST00000338963 UQCRBP14927 111 aa4.41□□□□□ -1.7
NEDD4-201ENST00000338963 HSD17B3P37058 310 aa4.41□□□□□ -1.7
NEDD4-201ENST00000338963 CCNFP41002 786 aa4.41□□□□□ -1.7
NEDD4-201ENST00000338963 ST13P50502 369 aaKnown RBP4.41□□□□□ -1.7
NEDD4-201ENST00000338963 BBS9Q3SYG4 887 aa4.41□□□□□ -1.7
NEDD4-201ENST00000338963 PEX26Q7Z412 305 aa4.41□□□□□ -1.7
NEDD4-201ENST00000338963 SNX32Q86XE0 403 aa4.41□□□□□ -1.7
NEDD4-201ENST00000338963 IFNL1Q8IU54 200 aa4.41□□□□□ -1.7
NEDD4-201ENST00000338963 AHI1Q8N157 1196 aa4.41□□□□□ -1.7
NEDD4-201ENST00000338963 ANKRD35Q8N283 1001 aa4.41□□□□□ -1.7
NEDD4-201ENST00000338963 NEDD1Q8NHV4 660 aa4.41□□□□□ -1.7
NEDD4-201ENST00000338963 MAGEB18Q96M61 343 aa4.41□□□□□ -1.7
NEDD4-201ENST00000338963 NLRP4Q96MN2 994 aa4.41□□□□□ -1.7
NEDD4-201ENST00000338963 LRRC37BQ96QE4 947 aa4.41□□□□□ -1.7
NEDD4-201ENST00000338963 PURBQ96QR8 312 aaKnown RBP4.41□□□□□ -1.7
NEDD4-201ENST00000338963 STK33Q9BYT3 514 aa4.41□□□□□ -1.7
NEDD4-201ENST00000338963 CYP4F12Q9HCS2 524 aa4.41□□□□□ -1.7
NEDD4-201ENST00000338963 LNPEPQ9UIQ6 1025 aa4.41□□□□□ -1.7
NEDD4-201ENST00000338963 DNM3Q9UQ16 869 aa4.41□□□□□ -1.7
NEDD4-201ENST00000338963 TSPY2A6NKD2 308 aa4.41□□□□□ -1.7
NEDD4-201ENST00000338963 SOBPA7XYQ1 873 aa4.41□□□□□ -1.7
NEDD4-201ENST00000338963 SPTLC1O15269 473 aa4.41□□□□□ -1.7
NEDD4-201ENST00000338963 MAGEC1O60732 1142 aa4.41□□□□□ -1.7
NEDD4-201ENST00000338963 KRT37O76014 449 aa4.41□□□□□ -1.7
NEDD4-201ENST00000338963 HAUS5O94927 633 aa4.41□□□□□ -1.7
NEDD4-201ENST00000338963 TSPY3P0CV98 308 aa4.41□□□□□ -1.7
NEDD4-201ENST00000338963 TSPY8P0CW00 308 aa4.41□□□□□ -1.7
NEDD4-201ENST00000338963 RFC1P35251 1148 aaPredicted RBP4.41□□□□□ -1.7
NEDD4-201ENST00000338963 TSPY1Q01534 308 aa4.41□□□□□ -1.7
NEDD4-201ENST00000338963 GOLGA8FQ08AF8 430 aa4.41□□□□□ -1.7
NEDD4-201ENST00000338963 GOLGA8DPQ0D2H9 430 aa4.41□□□□□ -1.7
NEDD4-201ENST00000338963 TTF1Q15361 905 aaPredicted RBP4.41□□□□□ -1.7
NEDD4-201ENST00000338963 CNGA2Q16280 664 aa4.41□□□□□ -1.7
NEDD4-201ENST00000338963 LRRC36Q1X8D7 754 aa4.41□□□□□ -1.7
NEDD4-201ENST00000338963 MYLK3Q32MK0 819 aa4.41□□□□□ -1.7
NEDD4-201ENST00000338963 RABL6Q3YEC7 729 aaPredicted RBP4.41□□□□□ -1.7
NEDD4-201ENST00000338963 SLC45A4Q5BKX6 768 aa4.41□□□□□ -1.7
NEDD4-201ENST00000338963 SYCE2Q6PIF2 218 aa4.41□□□□□ -1.7
NEDD4-201ENST00000338963 CCDC28AQ8IWP9 274 aa4.41□□□□□ -1.7
NEDD4-201ENST00000338963 CDRT15Q96T59 188 aa4.41□□□□□ -1.7
NEDD4-201ENST00000338963 MYD88Q99836 296 aa4.41□□□□□ -1.7
NEDD4-201ENST00000338963 MARCH7Q9H992 704 aa4.41□□□□□ -1.7
NEDD4-201ENST00000338963 OLFML3Q9NRN5 406 aa4.41□□□□□ -1.7
NEDD4-201ENST00000338963 STOML2Q9UJZ1 356 aa4.41□□□□□ -1.7
NEDD4-201ENST00000338963 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.41□□□□□ -1.7
NEDD4-201ENST00000338963 CAPN6Q9Y6Q1 641 aa4.41□□□□□ -1.7
NEDD4-201ENST00000338963 ADGRA3Q8IWK6 1321 aa4.41□□□□□ -1.7
NEDD4-201ENST00000338963 CDK12Q9NYV4 1490 aaPredicted RBP4.41□□□□□ -1.7
NEDD4-201ENST00000338963 POTECB2RU33 542 aa4.41□□□□□ -1.7
NEDD4-201ENST00000338963 MTSS1O43312 755 aa4.41□□□□□ -1.7
NEDD4-201ENST00000338963 MAP3K6O95382 1288 aa4.41□□□□□ -1.7
NEDD4-201ENST00000338963 ASS1P00966 412 aaKnown RBP4.41□□□□□ -1.7
NEDD4-201ENST00000338963 FGAP02671 866 aa4.41□□□□□ -1.7
NEDD4-201ENST00000338963 KRT8P05787 483 aa4.41□□□□□ -1.7
NEDD4-201ENST00000338963 RPS17P08708 135 aaKnown RBP4.41□□□□□ -1.7
NEDD4-201ENST00000338963 ENO2P09104 434 aaPredicted RBP4.41□□□□□ -1.7
NEDD4-201ENST00000338963 SSTP61278 116 aa4.41□□□□□ -1.7
NEDD4-201ENST00000338963 PLS1Q14651 629 aa4.41□□□□□ -1.7
NEDD4-201ENST00000338963 IZUMO2Q6UXV1 221 aa4.41□□□□□ -1.7
NEDD4-201ENST00000338963 RNF135Q8IUD6 432 aa4.41□□□□□ -1.7
NEDD4-201ENST00000338963 TMEM126BQ8IUX1 230 aa4.41□□□□□ -1.7
NEDD4-201ENST00000338963 TUBA1CQ9BQE3 449 aa4.41□□□□□ -1.7
NEDD4-201ENST00000338963 RAD21L1Q9H4I0 556 aa4.41□□□□□ -1.7
NEDD4-201ENST00000338963 FARSBQ9NSD9 589 aaKnown RBP4.41□□□□□ -1.7
NEDD4-201ENST00000338963 KCNH3Q9ULD8 1083 aa4.41□□□□□ -1.7
NEDD4-201ENST00000338963 KIAA0586Q9BVV6 1533 aa4.41□□□□□ -1.7
NEDD4-201ENST00000338963 RFX7Q2KHR2 1363 aa4.41□□□□□ -1.7
NEDD4-201ENST00000338963 CD109Q6YHK3 1445 aa4.41□□□□□ -1.7
NEDD4-201ENST00000338963 PTPDC1A2A3K4 754 aa4.4□□□□□ -1.7
NEDD4-201ENST00000338963 PCNAP12004 261 aa4.4□□□□□ -1.7
NEDD4-201ENST00000338963 CDC25CP30307 473 aa4.4□□□□□ -1.7
NEDD4-201ENST00000338963 PKLRP30613 574 aa4.4□□□□□ -1.7
NEDD4-201ENST00000338963 GRIK1P39086 918 aa4.4□□□□□ -1.7
NEDD4-201ENST00000338963 TUFMP49411 452 aaKnown RBP4.4□□□□□ -1.7
NEDD4-201ENST00000338963 CDK9P50750 372 aaKnown RBP4.4□□□□□ -1.7
NEDD4-201ENST00000338963 PPP4CP60510 307 aa4.4□□□□□ -1.7
NEDD4-201ENST00000338963 HNRNPDQ14103 355 aaKnown RBP4.4□□□□□ -1.7
NEDD4-201ENST00000338963 MORC3Q14149 939 aa4.4□□□□□ -1.7
NEDD4-201ENST00000338963 MMEL1Q495T6 779 aa4.4□□□□□ -1.7
NEDD4-201ENST00000338963 TTC39AQ5SRH9 613 aa4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms