RNA–Protein interactions for RNA: ENST00000338602.6

SLC28A1-202, Transcript of solute carrier family 28 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC28A1, Length 1,360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-202ENST00000338602 LPPQ93052 612 aa12.47□□□□□ -0.41
SLC28A1-202ENST00000338602 PPP2R3CQ969Q6 453 aa12.47□□□□□ -0.41
SLC28A1-202ENST00000338602 ZNF558Q96NG5 402 aa12.47□□□□□ -0.41
SLC28A1-202ENST00000338602 FAM193BQ96PV7 902 aaPredicted RBP12.47□□□□□ -0.41
SLC28A1-202ENST00000338602 NTPCRQ9BSD7 190 aaKnown RBP12.47□□□□□ -0.41
SLC28A1-202ENST00000338602 ZHX3Q9H4I2 956 aa12.47□□□□□ -0.41
SLC28A1-202ENST00000338602 PUF60Q9UHX1 559 aaKnown RBP12.47□□□□□ -0.41
SLC28A1-202ENST00000338602 INPP5FQ9Y2H2 1132 aa12.47□□□□□ -0.41
SLC28A1-202ENST00000338602 NCOR1O75376 2440 aa12.47□□□□□ -0.41
SLC28A1-202ENST00000338602 SFI1A8K8P3 1242 aa12.46□□□□□ -0.41
SLC28A1-202ENST00000338602 B4GALT5O43286 388 aa12.46□□□□□ -0.41
SLC28A1-202ENST00000338602 LPXNO60711 386 aa12.46□□□□□ -0.41
SLC28A1-202ENST00000338602 OFD1O75665 1012 aa12.46□□□□□ -0.41
SLC28A1-202ENST00000338602 NPTXRO95502 500 aa12.46□□□□□ -0.41
SLC28A1-202ENST00000338602 ME1P48163 572 aa12.46□□□□□ -0.41
SLC28A1-202ENST00000338602 KRT85P78386 507 aa12.46□□□□□ -0.41
SLC28A1-202ENST00000338602 KRT17Q04695 432 aa12.46□□□□□ -0.41
SLC28A1-202ENST00000338602 UBE3AQ05086 875 aa12.46□□□□□ -0.41
SLC28A1-202ENST00000338602 PKP1Q13835 747 aa12.46□□□□□ -0.41
SLC28A1-202ENST00000338602 BMS1Q14692 1282 aaKnown RBP12.46□□□□□ -0.41
SLC28A1-202ENST00000338602 DCAF4L1Q3SXM0 396 aa12.46□□□□□ -0.41
SLC28A1-202ENST00000338602 LONRF3Q496Y0 759 aa12.46□□□□□ -0.41
SLC28A1-202ENST00000338602 USP49Q70CQ1 688 aa12.46□□□□□ -0.41
SLC28A1-202ENST00000338602 DAW1Q8N136 415 aa12.46□□□□□ -0.41
SLC28A1-202ENST00000338602 COLGALT1Q8NBJ5 622 aa12.46□□□□□ -0.41
SLC28A1-202ENST00000338602 KIFC3Q9BVG8 833 aa12.46□□□□□ -0.41
SLC28A1-202ENST00000338602 EIF2AQ9BY44 585 aaKnown RBP12.46□□□□□ -0.41
SLC28A1-202ENST00000338602 MRPL4Q9BYD3 311 aaKnown RBP12.46□□□□□ -0.41
SLC28A1-202ENST00000338602 LRRC27Q9C0I9 530 aa12.46□□□□□ -0.41
SLC28A1-202ENST00000338602 CCDC113Q9H0I3 377 aa12.46□□□□□ -0.41
SLC28A1-202ENST00000338602 PARVGQ9HBI0 331 aa12.46□□□□□ -0.41
SLC28A1-202ENST00000338602 BLOC1S4Q9NUP1 217 aa12.46□□□□□ -0.41
SLC28A1-202ENST00000338602 RNF19AQ9NV58 838 aa12.46□□□□□ -0.41
SLC28A1-202ENST00000338602 FAM13BQ9NYF5 915 aa12.46□□□□□ -0.41
SLC28A1-202ENST00000338602 PLAGL2Q9UPG8 496 aa12.46□□□□□ -0.41
SLC28A1-202ENST00000338602 GIT1Q9Y2X7 761 aa12.46□□□□□ -0.41
SLC28A1-202ENST00000338602 IPPQ9Y573 584 aa12.46□□□□□ -0.41
SLC28A1-202ENST00000338602 CDH23Q9H251 3354 aa12.46□□□□□ -0.41
SLC28A1-202ENST00000338602 NR1I2O75469 434 aa12.45□□□□□ -0.42
SLC28A1-202ENST00000338602 LINC00271P0C7V0 271 aa12.45□□□□□ -0.42
SLC28A1-202ENST00000338602 NUCB2P80303 420 aa12.45□□□□□ -0.42
SLC28A1-202ENST00000338602 DNM1Q05193 864 aaKnown RBP12.45□□□□□ -0.42
SLC28A1-202ENST00000338602 MAPK7Q13164 816 aa12.45□□□□□ -0.42
SLC28A1-202ENST00000338602 RALGAPA2Q2PPJ7 1873 aa12.45□□□□□ -0.42
SLC28A1-202ENST00000338602 ARSHQ5FYA8 562 aa12.45□□□□□ -0.42
SLC28A1-202ENST00000338602 ATF7IP2Q5U623 682 aa12.45□□□□□ -0.42
SLC28A1-202ENST00000338602 KCNT2Q6UVM3 1135 aa12.45□□□□□ -0.42
SLC28A1-202ENST00000338602 AGMOQ6ZNB7 445 aa12.45□□□□□ -0.42
SLC28A1-202ENST00000338602 MYCT1Q8N699 235 aa12.45□□□□□ -0.42
SLC28A1-202ENST00000338602 KLHL23Q8NBE8 558 aa12.45□□□□□ -0.42
SLC28A1-202ENST00000338602 REEP2Q9BRK0 252 aa12.45□□□□□ -0.42
SLC28A1-202ENST00000338602 PYM1Q9BRP8 204 aaKnown RBP12.45□□□□□ -0.42
SLC28A1-202ENST00000338602 APOL6Q9BWW8 343 aa12.45□□□□□ -0.42
SLC28A1-202ENST00000338602 CUEDC2Q9H467 287 aa12.45□□□□□ -0.42
SLC28A1-202ENST00000338602 CWH43Q9H720 699 aa12.45□□□□□ -0.42
SLC28A1-202ENST00000338602 SPG21Q9NZD8 308 aa12.45□□□□□ -0.42
SLC28A1-202ENST00000338602 ARHGAP28Q9P2N2 729 aa12.45□□□□□ -0.42
SLC28A1-202ENST00000338602 PARP2Q9UGN5 583 aa12.45□□□□□ -0.42
SLC28A1-202ENST00000338602 NPHP3-ACAD11A0A0J9YXS1 232 aa12.44□□□□□ -0.42
SLC28A1-202ENST00000338602 GRM6O15303 877 aa12.44□□□□□ -0.42
SLC28A1-202ENST00000338602 SLC16A4O15374 487 aa12.44□□□□□ -0.42
SLC28A1-202ENST00000338602 FGF18O76093 207 aa12.44□□□□□ -0.42
SLC28A1-202ENST00000338602 AMPD3Q01432 767 aa12.44□□□□□ -0.42
SLC28A1-202ENST00000338602 GIT2Q14161 759 aa12.44□□□□□ -0.42
SLC28A1-202ENST00000338602 PDE12Q6L8Q7 609 aaKnown RBP12.44□□□□□ -0.42
SLC28A1-202ENST00000338602 LRRC55Q6ZSA7 311 aa12.44□□□□□ -0.42
SLC28A1-202ENST00000338602 PDILTQ8N807 584 aa12.44□□□□□ -0.42
SLC28A1-202ENST00000338602 IQUBQ8NA54 791 aa12.44□□□□□ -0.42
SLC28A1-202ENST00000338602 SMG8Q8ND04 991 aaKnown RBP12.44□□□□□ -0.42
SLC28A1-202ENST00000338602 MICAL1Q8TDZ2 1067 aa12.44□□□□□ -0.42
SLC28A1-202ENST00000338602 POF1BQ8WVV4 589 aa12.44□□□□□ -0.42
SLC28A1-202ENST00000338602 SPATA32Q96LK8 384 aa12.44□□□□□ -0.42
SLC28A1-202ENST00000338602 RPS6KC1Q96S38 1066 aa12.44□□□□□ -0.42
SLC28A1-202ENST00000338602 TCHPQ9BT92 498 aa12.44□□□□□ -0.42
SLC28A1-202ENST00000338602 PANK2Q9BZ23 570 aa12.44□□□□□ -0.42
SLC28A1-202ENST00000338602 PDZD7Q9H5P4 517 aa12.44□□□□□ -0.42
SLC28A1-202ENST00000338602 NSUN3Q9H649 340 aaKnown RBP12.44□□□□□ -0.42
SLC28A1-202ENST00000338602 ALG13Q9NP73 1137 aaKnown RBP12.44□□□□□ -0.42
SLC28A1-202ENST00000338602 TBC1D13Q9NVG8 400 aa12.44□□□□□ -0.42
SLC28A1-202ENST00000338602 RCOR1Q9UKL0 485 aa12.44□□□□□ -0.42
SLC28A1-202ENST00000338602 TNFSF13BQ9Y275 285 aa12.44□□□□□ -0.42
SLC28A1-202ENST00000338602 CHD9Q3L8U1 2897 aa12.44□□□□□ -0.42
SLC28A1-202ENST00000338602 ZMYM2Q9UBW7 1377 aa12.44□□□□□ -0.42
SLC28A1-202ENST00000338602 FNDC1Q4ZHG4 1894 aaPredicted RBP12.44□□□□□ -0.42
SLC28A1-202ENST00000338602 NCK2O43639 380 aa12.43□□□□□ -0.42
SLC28A1-202ENST00000338602 TRAK2O60296 914 aa12.43□□□□□ -0.42
SLC28A1-202ENST00000338602 ZC3H11AO75152 810 aaKnown RBP eCLIP12.43□□□□□ -0.42
SLC28A1-202ENST00000338602 ALDH2P05091 517 aa12.43□□□□□ -0.42
SLC28A1-202ENST00000338602 ITGB1P05556 798 aa12.43□□□□□ -0.42
SLC28A1-202ENST00000338602 BCAR1P56945 870 aa12.43□□□□□ -0.42
SLC28A1-202ENST00000338602 PLCB3Q01970 1234 aa12.43□□□□□ -0.42
SLC28A1-202ENST00000338602 CACNB1Q02641 598 aaPredicted RBP12.43□□□□□ -0.42
SLC28A1-202ENST00000338602 CDR2LQ86X02 465 aaPredicted RBP12.43□□□□□ -0.42
SLC28A1-202ENST00000338602 FAM178BQ8IXR5 827 aa12.43□□□□□ -0.42
SLC28A1-202ENST00000338602 SPPL3Q8TCT6 385 aa12.43□□□□□ -0.42
SLC28A1-202ENST00000338602 BICD1Q96G01 975 aa12.43□□□□□ -0.42
SLC28A1-202ENST00000338602 TMEM169Q96HH4 297 aa12.43□□□□□ -0.42
SLC28A1-202ENST00000338602 GAD1Q99259 594 aa12.43□□□□□ -0.42
SLC28A1-202ENST00000338602 ACO2Q99798 780 aaKnown RBP12.43□□□□□ -0.42
SLC28A1-202ENST00000338602 TMEM175Q9BSA9 504 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms