RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 HAPLN2Q9GZV7 340 aa16.09■□□□□ 0.17
CDK5RAP3-201ENST00000338399 ANKFY1Q9P2R3 1169 aa16.09■□□□□ 0.17
CDK5RAP3-201ENST00000338399 ACKR2O00590 384 aa16.08■□□□□ 0.17
CDK5RAP3-201ENST00000338399 MAPK13O15264 365 aa16.08■□□□□ 0.17
CDK5RAP3-201ENST00000338399 GYPCP04921 128 aa16.08■□□□□ 0.17
CDK5RAP3-201ENST00000338399 IQCF3P0C7M6 154 aa16.08■□□□□ 0.17
CDK5RAP3-201ENST00000338399 KRT13P13646 458 aa16.08■□□□□ 0.17
CDK5RAP3-201ENST00000338399 HOXC8P31273 242 aa16.08■□□□□ 0.17
CDK5RAP3-201ENST00000338399 CASP14P31944 242 aa16.08■□□□□ 0.17
CDK5RAP3-201ENST00000338399 KCNMA1Q12791 1236 aa16.08■□□□□ 0.17
CDK5RAP3-201ENST00000338399 BFSP1Q12934 665 aa16.08■□□□□ 0.17
CDK5RAP3-201ENST00000338399 ZPBP2Q6X784 338 aa16.08■□□□□ 0.17
CDK5RAP3-201ENST00000338399 INTS8Q75QN2 995 aaKnown RBP16.08■□□□□ 0.17
CDK5RAP3-201ENST00000338399 RNF180Q86T96 592 aa16.08■□□□□ 0.17
CDK5RAP3-201ENST00000338399 IFNLR1Q8IU57 520 aaPredicted RBP16.08■□□□□ 0.17
CDK5RAP3-201ENST00000338399 GPD1LQ8N335 351 aa16.08■□□□□ 0.17
CDK5RAP3-201ENST00000338399 PCSK9Q8NBP7 692 aaKnown RBP16.08■□□□□ 0.17
CDK5RAP3-201ENST00000338399 FBXL18Q96ME1 805 aa16.08■□□□□ 0.17
CDK5RAP3-201ENST00000338399 ACO2Q99798 780 aaKnown RBP16.08■□□□□ 0.17
CDK5RAP3-201ENST00000338399 AGO2Q9UKV8 859 aaKnown RBP16.08■□□□□ 0.17
CDK5RAP3-201ENST00000338399 SIK3Q9Y2K2 1263 aa16.08■□□□□ 0.17
CDK5RAP3-201ENST00000338399 FRMPD3Q5JV73 1810 aa16.08■□□□□ 0.16
CDK5RAP3-201ENST00000338399 AKR1B15C9JRZ8 316 aaPredicted RBP16.08■□□□□ 0.16
CDK5RAP3-201ENST00000338399 B4GALT5O43286 388 aa16.08■□□□□ 0.16
CDK5RAP3-201ENST00000338399 TRIM49P0CI25 452 aa16.08■□□□□ 0.16
CDK5RAP3-201ENST00000338399 TRIM49CP0CI26 452 aa16.08■□□□□ 0.16
CDK5RAP3-201ENST00000338399 PRPF4BQ13523 1007 aaKnown RBP16.08■□□□□ 0.16
CDK5RAP3-201ENST00000338399 KIZQ2M2Z5 673 aa16.08■□□□□ 0.16
CDK5RAP3-201ENST00000338399 ZNF410Q86VK4 478 aa16.08■□□□□ 0.16
CDK5RAP3-201ENST00000338399 TC2NQ8N9U0 490 aa16.08■□□□□ 0.16
CDK5RAP3-201ENST00000338399 DNAJB3Q8WWF6 145 aa16.08■□□□□ 0.16
CDK5RAP3-201ENST00000338399 FAM213AQ9BRX8 229 aa16.08■□□□□ 0.16
CDK5RAP3-201ENST00000338399 CRACR2AQ9BSW2 395 aa16.08■□□□□ 0.16
CDK5RAP3-201ENST00000338399 MMRN2Q9H8L6 949 aa16.08■□□□□ 0.16
CDK5RAP3-201ENST00000338399 PRMT7Q9NVM4 692 aaPredicted RBP16.08■□□□□ 0.16
CDK5RAP3-201ENST00000338399 RNF225M0QZC1 329 aaPredicted RBP16.07■□□□□ 0.16
CDK5RAP3-201ENST00000338399 TULP1O00294 542 aaPredicted RBP16.07■□□□□ 0.16
CDK5RAP3-201ENST00000338399 TPM1P09493 284 aa16.07■□□□□ 0.16
CDK5RAP3-201ENST00000338399 FXR1P51114 621 aaKnown RBP eCLIP16.07■□□□□ 0.16
CDK5RAP3-201ENST00000338399 VAMP7P51809 220 aa16.07■□□□□ 0.16
CDK5RAP3-201ENST00000338399 DLG4P78352 724 aa16.07■□□□□ 0.16
CDK5RAP3-201ENST00000338399 TRIM14Q14142 442 aa16.07■□□□□ 0.16
CDK5RAP3-201ENST00000338399 TMEM132AQ24JP5 1023 aa16.07■□□□□ 0.16
CDK5RAP3-201ENST00000338399 FAM47CQ5HY64 1035 aa16.07■□□□□ 0.16
CDK5RAP3-201ENST00000338399 LHX8Q68G74 356 aa16.07■□□□□ 0.16
CDK5RAP3-201ENST00000338399 PLEKHO2Q8TD55 490 aa16.07■□□□□ 0.16
CDK5RAP3-201ENST00000338399 TCHPQ9BT92 498 aa16.07■□□□□ 0.16
CDK5RAP3-201ENST00000338399 MSTO1Q9BUK6 570 aa16.07■□□□□ 0.16
CDK5RAP3-201ENST00000338399 ADAMTS10Q9H324 1103 aa16.07■□□□□ 0.16
CDK5RAP3-201ENST00000338399 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.07■□□□□ 0.16
CDK5RAP3-201ENST00000338399 GTF2IRD1Q9UHL9 959 aa16.07■□□□□ 0.16
CDK5RAP3-201ENST00000338399 GINS2Q9Y248 185 aa16.07■□□□□ 0.16
CDK5RAP3-201ENST00000338399 ZKSCAN5Q9Y2L8 839 aa16.07■□□□□ 0.16
CDK5RAP3-201ENST00000338399 PTPN22Q9Y2R2 807 aa16.07■□□□□ 0.16
CDK5RAP3-201ENST00000338399 A0A0B4J269 797 aa16.06■□□□□ 0.16
CDK5RAP3-201ENST00000338399 KIAA0391O15091 583 aaKnown RBP16.06■□□□□ 0.16
CDK5RAP3-201ENST00000338399 CLDN3O15551 220 aa16.06■□□□□ 0.16
CDK5RAP3-201ENST00000338399 EXTL3O43909 919 aa16.06■□□□□ 0.16
CDK5RAP3-201ENST00000338399 TOM1L1O75674 476 aa16.06■□□□□ 0.16
CDK5RAP3-201ENST00000338399 HARSP12081 509 aaKnown RBP16.06■□□□□ 0.16
CDK5RAP3-201ENST00000338399 TRIM21P19474 475 aaKnown RBP16.06■□□□□ 0.16
CDK5RAP3-201ENST00000338399 GDF6Q6KF10 455 aaPredicted RBP16.06■□□□□ 0.16
CDK5RAP3-201ENST00000338399 ZBTB33Q86T24 672 aa16.06■□□□□ 0.16
CDK5RAP3-201ENST00000338399 NUP58Q9BVL2 599 aa16.06■□□□□ 0.16
CDK5RAP3-201ENST00000338399 FAM207AQ9NSI2 230 aaPredicted RBP16.06■□□□□ 0.16
CDK5RAP3-201ENST00000338399 TTC26A0AVF1 554 aa16.05■□□□□ 0.16
CDK5RAP3-201ENST00000338399 GPR32O75388 356 aa16.05■□□□□ 0.16
CDK5RAP3-201ENST00000338399 FMO5P49326 533 aa16.05■□□□□ 0.16
CDK5RAP3-201ENST00000338399 ACOT2P49753 483 aa16.05■□□□□ 0.16
CDK5RAP3-201ENST00000338399 CDC42EP1Q00587 391 aa16.05■□□□□ 0.16
CDK5RAP3-201ENST00000338399 AMHR2Q16671 573 aa16.05■□□□□ 0.16
CDK5RAP3-201ENST00000338399 FAM187BQ17R55 369 aa16.05■□□□□ 0.16
CDK5RAP3-201ENST00000338399 ATF7IP2Q5U623 682 aa16.05■□□□□ 0.16
CDK5RAP3-201ENST00000338399 TSHZ1Q6ZSZ6 1077 aa16.05■□□□□ 0.16
CDK5RAP3-201ENST00000338399 SRGAP1Q7Z6B7 1085 aa16.05■□□□□ 0.16
CDK5RAP3-201ENST00000338399 ZSCAN30Q86W11 494 aa16.05■□□□□ 0.16
CDK5RAP3-201ENST00000338399 CDR2LQ86X02 465 aaPredicted RBP16.05■□□□□ 0.16
CDK5RAP3-201ENST00000338399 DNAJC5GQ8N7S2 189 aa16.05■□□□□ 0.16
CDK5RAP3-201ENST00000338399 VTI1AQ96AJ9 217 aa16.05■□□□□ 0.16
CDK5RAP3-201ENST00000338399 MFSD14AQ96MC6 490 aa16.05■□□□□ 0.16
CDK5RAP3-201ENST00000338399 TTYH3Q9C0H2 523 aa16.05■□□□□ 0.16
CDK5RAP3-201ENST00000338399 CDHR5Q9HBB8 845 aa16.05■□□□□ 0.16
CDK5RAP3-201ENST00000338399 KIAA1586Q9HCI6 787 aa16.05■□□□□ 0.16
CDK5RAP3-201ENST00000338399 ZNF233A6NK53 670 aa16.05■□□□□ 0.16
CDK5RAP3-201ENST00000338399 ABLIM1O14639 778 aa16.05■□□□□ 0.16
CDK5RAP3-201ENST00000338399 EPHB6O15197 1021 aa16.05■□□□□ 0.16
CDK5RAP3-201ENST00000338399 MFAP3LO75121 409 aa16.05■□□□□ 0.16
CDK5RAP3-201ENST00000338399 LDHAP00338 332 aaKnown RBP16.05■□□□□ 0.16
CDK5RAP3-201ENST00000338399 ACLYP53396 1101 aa16.05■□□□□ 0.16
CDK5RAP3-201ENST00000338399 CCZ1BP86790 482 aa16.05■□□□□ 0.16
CDK5RAP3-201ENST00000338399 CCZ1P86791 482 aaPredicted RBP16.05■□□□□ 0.16
CDK5RAP3-201ENST00000338399 CYP24A1Q07973 514 aa16.05■□□□□ 0.16
CDK5RAP3-201ENST00000338399 SEZ6Q53EL9 994 aa16.05■□□□□ 0.16
CDK5RAP3-201ENST00000338399 ZBTB41Q5SVQ8 909 aa16.05■□□□□ 0.16
CDK5RAP3-201ENST00000338399 C1orf220Q5T0J3 134 aa16.05■□□□□ 0.16
CDK5RAP3-201ENST00000338399 CRELD2Q6UXH1 353 aaPredicted RBP16.05■□□□□ 0.16
CDK5RAP3-201ENST00000338399 CCDC127Q96BQ5 260 aa16.05■□□□□ 0.16
CDK5RAP3-201ENST00000338399 OSMRQ99650 979 aa16.05■□□□□ 0.16
CDK5RAP3-201ENST00000338399 LSM14BQ9BX40 385 aaKnown RBP16.05■□□□□ 0.16
CDK5RAP3-201ENST00000338399 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms