RNA–Protein interactions for RNA: ENST00000338193.10

PRIM1-201, Transcript of DNA primase subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRIM1, Length 1,393 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-201ENST00000338193 RPLP2P05387 115 aaKnown RBP13.81□□□□□ -0.2
PRIM1-201ENST00000338193 IBSPP21815 317 aaPredicted RBP13.81□□□□□ -0.2
PRIM1-201ENST00000338193 RFC2P35250 354 aa13.81□□□□□ -0.2
PRIM1-201ENST00000338193 DEFB103AP81534 67 aa13.81□□□□□ -0.2
PRIM1-201ENST00000338193 PPIGQ13427 754 aaKnown RBP eCLIP13.81□□□□□ -0.24e-6■■□□□ 12.9
PRIM1-201ENST00000338193 SHHQ15465 462 aa13.81□□□□□ -0.2
PRIM1-201ENST00000338193 GPR153Q6NV75 609 aa13.81□□□□□ -0.2
PRIM1-201ENST00000338193 CAVIN1Q6NZI2 390 aaKnown RBP13.81□□□□□ -0.2
PRIM1-201ENST00000338193 NELFCDQ8IXH7 590 aa13.81□□□□□ -0.2
PRIM1-201ENST00000338193 SMARCE1Q969G3 411 aa13.81□□□□□ -0.2
PRIM1-201ENST00000338193 C2orf40Q9H1Z8 148 aa13.81□□□□□ -0.2
PRIM1-201ENST00000338193 CXCL16Q9H2A7 254 aa13.81□□□□□ -0.2
PRIM1-201ENST00000338193 ST6GALNAC4Q9H4F1 302 aa13.81□□□□□ -0.2
PRIM1-201ENST00000338193 PDZD7Q9H5P4 517 aa13.81□□□□□ -0.2
PRIM1-201ENST00000338193 TMEM134Q9H6X4 195 aa13.81□□□□□ -0.2
PRIM1-201ENST00000338193 SEL1LQ9UBV2 794 aa13.81□□□□□ -0.2
PRIM1-201ENST00000338193 PIN4Q9Y237 131 aaKnown RBP13.81□□□□□ -0.2
PRIM1-201ENST00000338193 SQORQ9Y6N5 450 aa13.81□□□□□ -0.2
PRIM1-201ENST00000338193 CNTNAP2Q9UHC6 1331 aa13.8□□□□□ -0.2
PRIM1-201ENST00000338193 MBD3O95983 291 aa13.8□□□□□ -0.2
PRIM1-201ENST00000338193 MYL1P05976 194 aa13.8□□□□□ -0.2
PRIM1-201ENST00000338193 ATF7P17544 494 aaPredicted RBP13.8□□□□□ -0.2
PRIM1-201ENST00000338193 SFPQP23246 707 aaKnown RBP eCLIP13.8□□□□□ -0.2
PRIM1-201ENST00000338193 CDC42EP1Q00587 391 aa13.8□□□□□ -0.2
PRIM1-201ENST00000338193 KCNB1Q14721 858 aa13.8□□□□□ -0.2
PRIM1-201ENST00000338193 MAPK6Q16659 721 aa13.8□□□□□ -0.2
PRIM1-201ENST00000338193 FAM187BQ17R55 369 aa13.8□□□□□ -0.2
PRIM1-201ENST00000338193 SEZ6Q53EL9 994 aa13.8□□□□□ -0.2
PRIM1-201ENST00000338193 CNKSR3Q6P9H4 555 aa13.8□□□□□ -0.2
PRIM1-201ENST00000338193 MAP4K3Q8IVH8 894 aa13.8□□□□□ -0.2
PRIM1-201ENST00000338193 CEP120Q8N960 986 aa13.8□□□□□ -0.2
PRIM1-201ENST00000338193 SEPT8Q92599 483 aa13.8□□□□□ -0.2
PRIM1-201ENST00000338193 ACO2Q99798 780 aaKnown RBP13.8□□□□□ -0.2
PRIM1-201ENST00000338193 ADAM2Q99965 735 aa13.8□□□□□ -0.2
PRIM1-201ENST00000338193 LBHD1Q9BQE6 289 aaPredicted RBP13.8□□□□□ -0.2
PRIM1-201ENST00000338193 PRMT7Q9NVM4 692 aaPredicted RBP13.8□□□□□ -0.2
PRIM1-201ENST00000338193 KIAA1468Q9P260 1216 aa13.8□□□□□ -0.2
PRIM1-201ENST00000338193 CEP290O15078 2479 aa13.8□□□□□ -0.2
PRIM1-201ENST00000338193 GBF1Q92538 1859 aa13.79□□□□□ -0.2
PRIM1-201ENST00000338193 ENPP3O14638 875 aa13.79□□□□□ -0.2
PRIM1-201ENST00000338193 GPR182O15218 404 aa13.79□□□□□ -0.2
PRIM1-201ENST00000338193 MEFVO15553 781 aaPredicted RBP13.79□□□□□ -0.2
PRIM1-201ENST00000338193 TGFB1I1O43294 461 aa13.79□□□□□ -0.2
PRIM1-201ENST00000338193 ERLIN2O94905 339 aa13.79□□□□□ -0.2
PRIM1-201ENST00000338193 GATMP50440 423 aa13.79□□□□□ -0.2
PRIM1-201ENST00000338193 EFNA5P52803 228 aa13.79□□□□□ -0.2
PRIM1-201ENST00000338193 SMTNP53814 917 aa13.79□□□□□ -0.2
PRIM1-201ENST00000338193 PRPF4BQ13523 1007 aaKnown RBP13.79□□□□□ -0.2
PRIM1-201ENST00000338193 MORC3Q14149 939 aa13.79□□□□□ -0.2
PRIM1-201ENST00000338193 ZBTB41Q5SVQ8 909 aa13.79□□□□□ -0.2
PRIM1-201ENST00000338193 L1TD1Q5T7N2 865 aaKnown RBP13.79□□□□□ -0.2
PRIM1-201ENST00000338193 FAM109BQ6ICB4 259 aaPredicted RBP13.79□□□□□ -0.2
PRIM1-201ENST00000338193 RBM43Q6ZSC3 357 aaKnown RBP13.79□□□□□ -0.2
PRIM1-201ENST00000338193 TMEM192Q8IY95 271 aa13.79□□□□□ -0.2
PRIM1-201ENST00000338193 USP38Q8NB14 1042 aa13.79□□□□□ -0.2
PRIM1-201ENST00000338193 ZNF507Q8TCN5 953 aa13.79□□□□□ -0.2
PRIM1-201ENST00000338193 KCNN1Q92952 543 aa13.79□□□□□ -0.2
PRIM1-201ENST00000338193 PRO3102Q9H379 93 aa13.79□□□□□ -0.2
PRIM1-201ENST00000338193 PTPRHQ9HD43 1115 aa13.79□□□□□ -0.2
PRIM1-201ENST00000338193 RNF19AQ9NV58 838 aa13.79□□□□□ -0.2
PRIM1-201ENST00000338193 HES2Q9Y543 173 aa13.79□□□□□ -0.2
PRIM1-201ENST00000338193 PDE4DIPQ5VU43 2346 aa13.79□□□□□ -0.2
PRIM1-201ENST00000338193 LAMA3Q16787 3333 aa13.79□□□□□ -0.2
PRIM1-201ENST00000338193 A0A1B0GUA9 196 aa13.78□□□□□ -0.2
PRIM1-201ENST00000338193 C9IYK1 514 aa13.78□□□□□ -0.2
PRIM1-201ENST00000338193 NPTXRO95502 500 aa13.78□□□□□ -0.2
PRIM1-201ENST00000338193 FGBP02675 491 aa13.78□□□□□ -0.2
PRIM1-201ENST00000338193 PROZP22891 400 aa13.78□□□□□ -0.2
PRIM1-201ENST00000338193 ADSSP30520 456 aa13.78□□□□□ -0.2
PRIM1-201ENST00000338193 PRCPP42785 496 aa13.78□□□□□ -0.2
PRIM1-201ENST00000338193 PMS1P54277 932 aaKnown RBP13.78□□□□□ -0.2
PRIM1-201ENST00000338193 WDR5P61964 334 aaKnown RBP13.78□□□□□ -0.2
PRIM1-201ENST00000338193 KLHL40Q2TBA0 621 aa13.78□□□□□ -0.2
PRIM1-201ENST00000338193 ATF7IP2Q5U623 682 aa13.78□□□□□ -0.2
PRIM1-201ENST00000338193 ZBTB33Q86T24 672 aa13.78□□□□□ -0.2
PRIM1-201ENST00000338193 CRIPAKQ8N1N5 446 aa13.78□□□□□ -0.2
PRIM1-201ENST00000338193 TMEM130Q8N3G9 435 aa13.78□□□□□ -0.2
PRIM1-201ENST00000338193 EFCAB3Q8N7B9 438 aa13.78□□□□□ -0.2
PRIM1-201ENST00000338193 SMG8Q8ND04 991 aaKnown RBP13.78□□□□□ -0.2
PRIM1-201ENST00000338193 LPPQ93052 612 aa13.78□□□□□ -0.2
PRIM1-201ENST00000338193 GSDMAQ96QA5 445 aa13.78□□□□□ -0.2
PRIM1-201ENST00000338193 CDT1Q9H211 546 aa13.78□□□□□ -0.2
PRIM1-201ENST00000338193 NXF3Q9H4D5 531 aaKnown RBP13.78□□□□□ -0.2
PRIM1-201ENST00000338193 RGS18Q9NS28 235 aa13.78□□□□□ -0.2
PRIM1-201ENST00000338193 GRXCR1A8MXD5 290 aa13.77□□□□□ -0.21
PRIM1-201ENST00000338193 SMC2O95347 1197 aa13.77□□□□□ -0.21
PRIM1-201ENST00000338193 PARNO95453 639 aaKnown RBP13.77□□□□□ -0.21
PRIM1-201ENST00000338193 PIGRP01833 764 aa13.77□□□□□ -0.21
PRIM1-201ENST00000338193 HARSP12081 509 aaKnown RBP13.77□□□□□ -0.21
PRIM1-201ENST00000338193 AFF1P51825 1210 aaKnown RBP13.77□□□□□ -0.21
PRIM1-201ENST00000338193 BMT2Q1RMZ1 405 aa13.77□□□□□ -0.21
PRIM1-201ENST00000338193 CCDC183Q5T5S1 534 aa13.77□□□□□ -0.21
PRIM1-201ENST00000338193 ZNF658Q5TYW1 1059 aaPredicted RBP13.77□□□□□ -0.21
PRIM1-201ENST00000338193 RASIP1Q5U651 963 aa13.77□□□□□ -0.21
PRIM1-201ENST00000338193 FAM117BQ6P1L5 589 aa13.77□□□□□ -0.21
PRIM1-201ENST00000338193 RPUSD2Q8IZ73 545 aaKnown RBP13.77□□□□□ -0.21
PRIM1-201ENST00000338193 HERVK_113Q902F9 699 aa13.77□□□□□ -0.21
PRIM1-201ENST00000338193 MED15Q96RN5 788 aa13.77□□□□□ -0.21
PRIM1-201ENST00000338193 MRPL4Q9BYD3 311 aaKnown RBP13.77□□□□□ -0.21
PRIM1-201ENST00000338193 UBE2OQ9C0C9 1292 aaKnown RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms