RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 NLRP11P59045 1033 aaKnown RBP16.01■□□□□ 0.15
CBX3-201ENST00000337620 ZNF200P98182 395 aaPredicted RBP16.01■□□□□ 0.15
CBX3-201ENST00000337620 TMEM132AQ24JP5 1023 aa16.01■□□□□ 0.15
CBX3-201ENST00000337620 GPD1LQ8N335 351 aa16.01■□□□□ 0.15
CBX3-201ENST00000337620 TCHPQ9BT92 498 aa16.01■□□□□ 0.15
CBX3-201ENST00000337620 DDX20Q9UHI6 824 aaKnown RBP16.01■□□□□ 0.15
CBX3-201ENST00000337620 AGO2Q9UKV8 859 aaKnown RBP16.01■□□□□ 0.15
CBX3-201ENST00000337620 LUC7L2Q9Y383 392 aaKnown RBP16.01■□□□□ 0.15
CBX3-201ENST00000337620 STYXL1Q9Y6J8 313 aa16.01■□□□□ 0.15
CBX3-201ENST00000337620 CEP350Q5VT06 3117 aa16.01■□□□□ 0.15
CBX3-201ENST00000337620 DNAH12Q6ZR08 3092 aa16.01■□□□□ 0.15
CBX3-201ENST00000337620 SIP14410 1827 aa16.01■□□□□ 0.15
CBX3-201ENST00000337620 MBLAC1A4D2B0 266 aaPredicted RBP16.01■□□□□ 0.15
CBX3-201ENST00000337620 MAPK13O15264 365 aa16.01■□□□□ 0.15
CBX3-201ENST00000337620 TREHO43280 583 aa16.01■□□□□ 0.15
CBX3-201ENST00000337620 INHAP05111 366 aa16.01■□□□□ 0.15
CBX3-201ENST00000337620 ADRB2P07550 413 aa16.01■□□□□ 0.15
CBX3-201ENST00000337620 HARSP12081 509 aaKnown RBP16.01■□□□□ 0.15
CBX3-201ENST00000337620 KRT9P35527 623 aa16.01■□□□□ 0.15
CBX3-201ENST00000337620 PRMT2P55345 433 aa16.01■□□□□ 0.15
CBX3-201ENST00000337620 DLG4P78352 724 aa16.01■□□□□ 0.15
CBX3-201ENST00000337620 MBTD1Q05BQ5 628 aa16.01■□□□□ 0.15
CBX3-201ENST00000337620 POU5F1BQ06416 359 aa16.01■□□□□ 0.15
CBX3-201ENST00000337620 TMEM62Q0P6H9 643 aa16.01■□□□□ 0.15
CBX3-201ENST00000337620 KCNA10Q16322 511 aa16.01■□□□□ 0.15
CBX3-201ENST00000337620 ZPBP2Q6X784 338 aa16.01■□□□□ 0.15
CBX3-201ENST00000337620 RUFY4Q6ZNE9 571 aa16.01■□□□□ 0.15
CBX3-201ENST00000337620 SLAIN1Q8ND83 568 aa16.01■□□□□ 0.15
CBX3-201ENST00000337620 NEK11Q8NG66 645 aa16.01■□□□□ 0.15
CBX3-201ENST00000337620 ACO2Q99798 780 aaKnown RBP16.01■□□□□ 0.15
CBX3-201ENST00000337620 MSTO1Q9BUK6 570 aa16.01■□□□□ 0.15
CBX3-201ENST00000337620 NFKBIZQ9BYH8 718 aa16.01■□□□□ 0.15
CBX3-201ENST00000337620 HAPLN2Q9GZV7 340 aa16.01■□□□□ 0.15
CBX3-201ENST00000337620 FZD8Q9H461 694 aa16.01■□□□□ 0.15
CBX3-201ENST00000337620 CAPN11Q9UMQ6 739 aa16.01■□□□□ 0.15
CBX3-201ENST00000337620 GINS2Q9Y248 185 aa16.01■□□□□ 0.15
CBX3-201ENST00000337620 ACKR2O00590 384 aa16■□□□□ 0.15
CBX3-201ENST00000337620 CLDN3O15551 220 aa16■□□□□ 0.15
CBX3-201ENST00000337620 ASGR1P07306 291 aa16■□□□□ 0.15
CBX3-201ENST00000337620 GNAT1P11488 350 aa16■□□□□ 0.15
CBX3-201ENST00000337620 GRK4P32298 578 aa16■□□□□ 0.15
CBX3-201ENST00000337620 GPC3P51654 580 aa16■□□□□ 0.15
CBX3-201ENST00000337620 NKX3-2P78367 333 aa16■□□□□ 0.15
CBX3-201ENST00000337620 ADAM17P78536 824 aa16■□□□□ 0.15
CBX3-201ENST00000337620 PRPF4BQ13523 1007 aaKnown RBP16■□□□□ 0.15
CBX3-201ENST00000337620 ZBTB33Q86T24 672 aa16■□□□□ 0.15
CBX3-201ENST00000337620 CCDC127Q96BQ5 260 aa16■□□□□ 0.15
CBX3-201ENST00000337620 FBXL18Q96ME1 805 aa16■□□□□ 0.15
CBX3-201ENST00000337620 LSM14BQ9BX40 385 aaKnown RBP16■□□□□ 0.15
CBX3-201ENST00000337620 AGPAT5Q9NUQ2 364 aa16■□□□□ 0.15
CBX3-201ENST00000337620 PTCH2Q9Y6C5 1203 aa16■□□□□ 0.15
CBX3-201ENST00000337620 SMIM35A0A1B0GVV1 85 aa16■□□□□ 0.15
CBX3-201ENST00000337620 ZNF233A6NK53 670 aa16■□□□□ 0.15
CBX3-201ENST00000337620 EXTL3O43909 919 aa16■□□□□ 0.15
CBX3-201ENST00000337620 IQCF3P0C7M6 154 aa16■□□□□ 0.15
CBX3-201ENST00000337620 HSPA6P17066 643 aa16■□□□□ 0.15
CBX3-201ENST00000337620 FMO5P49326 533 aa16■□□□□ 0.15
CBX3-201ENST00000337620 ACOT2P49753 483 aa16■□□□□ 0.15
CBX3-201ENST00000337620 EXOC3L4Q17RC7 722 aa16■□□□□ 0.15
CBX3-201ENST00000337620 KIZQ2M2Z5 673 aa16■□□□□ 0.15
CBX3-201ENST00000337620 NBPF20Q3BBV1 942 aa16■□□□□ 0.15
CBX3-201ENST00000337620 GBP6Q6ZN66 633 aa16■□□□□ 0.15
CBX3-201ENST00000337620 CCDC112Q8NEF3 446 aa16■□□□□ 0.15
CBX3-201ENST00000337620 DNAJB3Q8WWF6 145 aa16■□□□□ 0.15
CBX3-201ENST00000337620 PANX2Q96RD6 677 aa16■□□□□ 0.15
CBX3-201ENST00000337620 BAG1Q99933 345 aaPredicted RBP16■□□□□ 0.15
CBX3-201ENST00000337620 TTYH3Q9C0H2 523 aa16■□□□□ 0.15
CBX3-201ENST00000337620 PRMT7Q9NVM4 692 aaPredicted RBP16■□□□□ 0.15
CBX3-201ENST00000337620 A0A0B4J269 797 aa15.99■□□□□ 0.15
CBX3-201ENST00000337620 KIAA0391O15091 583 aaKnown RBP15.99■□□□□ 0.15
CBX3-201ENST00000337620 EPHB6O15197 1021 aa15.99■□□□□ 0.15
CBX3-201ENST00000337620 B4GALT5O43286 388 aa15.99■□□□□ 0.15
CBX3-201ENST00000337620 TOM1L1O75674 476 aa15.99■□□□□ 0.15
CBX3-201ENST00000337620 FIGNQ5HY92 759 aa15.99■□□□□ 0.15
CBX3-201ENST00000337620 KLHDC9Q8NEP7 349 aa15.99■□□□□ 0.15
CBX3-201ENST00000337620 ZNF397Q8NF99 534 aaPredicted RBP15.99■□□□□ 0.15
CBX3-201ENST00000337620 PLEKHO2Q8TD55 490 aa15.99■□□□□ 0.15
CBX3-201ENST00000337620 TMX1Q9H3N1 280 aa15.99■□□□□ 0.15
CBX3-201ENST00000337620 KIAA1586Q9HCI6 787 aa15.99■□□□□ 0.15
CBX3-201ENST00000337620 HMX1Q9NP08 348 aaPredicted RBP15.99■□□□□ 0.15
CBX3-201ENST00000337620 ABHD10Q9NUJ1 306 aa15.99■□□□□ 0.15
CBX3-201ENST00000337620 LDHAP00338 332 aaKnown RBP15.98■□□□□ 0.15
CBX3-201ENST00000337620 SLC9A1P19634 815 aa15.98■□□□□ 0.15
CBX3-201ENST00000337620 APBA1Q02410 837 aa15.98■□□□□ 0.15
CBX3-201ENST00000337620 CYP24A1Q07973 514 aa15.98■□□□□ 0.15
CBX3-201ENST00000337620 CBWD6Q4V339 395 aa15.98■□□□□ 0.15
CBX3-201ENST00000337620 FAM47CQ5HY64 1035 aa15.98■□□□□ 0.15
CBX3-201ENST00000337620 CBWD3Q5JTY5 395 aa15.98■□□□□ 0.15
CBX3-201ENST00000337620 CBWD5Q5RIA9 395 aa15.98■□□□□ 0.15
CBX3-201ENST00000337620 ATF7IP2Q5U623 682 aa15.98■□□□□ 0.15
CBX3-201ENST00000337620 ZNF410Q86VK4 478 aa15.98■□□□□ 0.15
CBX3-201ENST00000337620 IFNLR1Q8IU57 520 aaPredicted RBP15.98■□□□□ 0.15
CBX3-201ENST00000337620 C17orf53Q8N3J3 647 aaPredicted RBP15.98■□□□□ 0.15
CBX3-201ENST00000337620 IQCDQ96DY2 449 aa15.98■□□□□ 0.15
CBX3-201ENST00000337620 CCDC51Q96ER9 411 aa15.98■□□□□ 0.15
CBX3-201ENST00000337620 MFSD14AQ96MC6 490 aa15.98■□□□□ 0.15
CBX3-201ENST00000337620 GCLMP48507 274 aa15.98■□□□□ 0.15
CBX3-201ENST00000337620 CDC42EP1Q00587 391 aa15.98■□□□□ 0.15
CBX3-201ENST00000337620 PPP3CAQ08209 521 aa15.98■□□□□ 0.15
CBX3-201ENST00000337620 TSR1Q2NL82 804 aaKnown RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms