RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 EIF2AQ9BY44 585 aaKnown RBP15.43■□□□□ 0.06
LIMS1-201ENST00000332345 PARVGQ9HBI0 331 aa15.43■□□□□ 0.06
LIMS1-201ENST00000332345 FAM13BQ9NYF5 915 aa15.43■□□□□ 0.06
LIMS1-201ENST00000332345 ARHGAP28Q9P2N2 729 aa15.43■□□□□ 0.06
LIMS1-201ENST00000332345 KANSL3Q9P2N6 904 aa15.43■□□□□ 0.06
LIMS1-201ENST00000332345 PCDHA7Q9UN72 937 aa15.43■□□□□ 0.06
LIMS1-201ENST00000332345 IPPQ9Y573 584 aa15.43■□□□□ 0.06
LIMS1-201ENST00000332345 MTCH2Q9Y6C9 303 aa15.43■□□□□ 0.06
LIMS1-201ENST00000332345 COL6A3P12111 3177 aa15.43■□□□□ 0.06
LIMS1-201ENST00000332345 CARNS1A5YM72 827 aa15.42■□□□□ 0.06
LIMS1-201ENST00000332345 SLC16A4O15374 487 aa15.42■□□□□ 0.06
LIMS1-201ENST00000332345 LPXNO60711 386 aa15.42■□□□□ 0.06
LIMS1-201ENST00000332345 TBCAO75347 108 aaKnown RBP15.42■□□□□ 0.06
LIMS1-201ENST00000332345 NPTXRO95502 500 aa15.42■□□□□ 0.06
LIMS1-201ENST00000332345 LAG3P18627 525 aa15.42■□□□□ 0.06
LIMS1-201ENST00000332345 STRN3Q13033 797 aa15.42■□□□□ 0.06
LIMS1-201ENST00000332345 NOMO2Q5JPE7 1267 aa15.42■□□□□ 0.06
LIMS1-201ENST00000332345 AXDND1Q5T1B0 1012 aaPredicted RBP15.42■□□□□ 0.06
LIMS1-201ENST00000332345 AGMOQ6ZNB7 445 aa15.42■□□□□ 0.06
LIMS1-201ENST00000332345 LRRC55Q6ZSA7 311 aa15.42■□□□□ 0.06
LIMS1-201ENST00000332345 PDILTQ8N807 584 aa15.42■□□□□ 0.06
LIMS1-201ENST00000332345 IQUBQ8NA54 791 aa15.42■□□□□ 0.06
LIMS1-201ENST00000332345 SMG8Q8ND04 991 aaKnown RBP15.42■□□□□ 0.06
LIMS1-201ENST00000332345 URGCPQ8TCY9 931 aa15.42■□□□□ 0.06
LIMS1-201ENST00000332345 SPATA32Q96LK8 384 aa15.42■□□□□ 0.06
LIMS1-201ENST00000332345 MRPL4Q9BYD3 311 aaKnown RBP15.42■□□□□ 0.06
LIMS1-201ENST00000332345 LRRC27Q9C0I9 530 aa15.42■□□□□ 0.06
LIMS1-201ENST00000332345 SCAND2PQ9GZW5 306 aaPredicted RBP15.42■□□□□ 0.06
LIMS1-201ENST00000332345 CUEDC2Q9H467 287 aa15.42■□□□□ 0.06
LIMS1-201ENST00000332345 ZHX3Q9H4I2 956 aa15.42■□□□□ 0.06
LIMS1-201ENST00000332345 CWH43Q9H720 699 aa15.42■□□□□ 0.06
LIMS1-201ENST00000332345 RSAD1Q9HA92 442 aa15.42■□□□□ 0.06
LIMS1-201ENST00000332345 TCHHQ07283 1943 aa15.42■□□□□ 0.06
LIMS1-201ENST00000332345 PRRC2BQ5JSZ5 2229 aaKnown RBP15.41■□□□□ 0.06
LIMS1-201ENST00000332345 TRANK1O15050 2925 aa15.41■□□□□ 0.06
LIMS1-201ENST00000332345 ABCD1P33897 745 aa15.41■□□□□ 0.06
LIMS1-201ENST00000332345 ALDH7A1P49419 539 aaKnown RBP15.41■□□□□ 0.06
LIMS1-201ENST00000332345 AMPD3Q01432 767 aa15.41■□□□□ 0.06
LIMS1-201ENST00000332345 RNASELQ05823 741 aaKnown RBP15.41■□□□□ 0.06
LIMS1-201ENST00000332345 ATF7IP2Q5U623 682 aa15.41■□□□□ 0.06
LIMS1-201ENST00000332345 SHC4Q6S5L8 630 aa15.41■□□□□ 0.06
LIMS1-201ENST00000332345 CDR2LQ86X02 465 aaPredicted RBP15.41■□□□□ 0.06
LIMS1-201ENST00000332345 SLC17A8Q8NDX2 589 aa15.41■□□□□ 0.06
LIMS1-201ENST00000332345 TMEM161BQ8NDZ6 487 aa15.41■□□□□ 0.06
LIMS1-201ENST00000332345 PPM1EQ8WY54 764 aa15.41■□□□□ 0.06
LIMS1-201ENST00000332345 DDX12PQ92771 950 aa15.41■□□□□ 0.06
LIMS1-201ENST00000332345 MRPL38Q96DV4 380 aaKnown RBP15.41■□□□□ 0.06
LIMS1-201ENST00000332345 PYM1Q9BRP8 204 aaKnown RBP15.41■□□□□ 0.06
LIMS1-201ENST00000332345 LMAN2LQ9H0V9 348 aa15.41■□□□□ 0.06
LIMS1-201ENST00000332345 PDZD7Q9H5P4 517 aa15.41■□□□□ 0.06
LIMS1-201ENST00000332345 PLAGL2Q9UPG8 496 aa15.41■□□□□ 0.06
LIMS1-201ENST00000332345 INPP5FQ9Y2H2 1132 aa15.41■□□□□ 0.06
LIMS1-201ENST00000332345 GIT1Q9Y2X7 761 aa15.41■□□□□ 0.06
LIMS1-201ENST00000332345 TTLL13PA6NNM8 815 aa15.4■□□□□ 0.06
LIMS1-201ENST00000332345 MEIS3P2A8K0S8 358 aa15.4■□□□□ 0.06
LIMS1-201ENST00000332345 TRAK2O60296 914 aa15.4■□□□□ 0.06
LIMS1-201ENST00000332345 ZNF131P52739 623 aa15.4■□□□□ 0.06
LIMS1-201ENST00000332345 CCDC85BQ15834 202 aaPredicted RBP15.4■□□□□ 0.06
LIMS1-201ENST00000332345 DCAF4L1Q3SXM0 396 aa15.4■□□□□ 0.06
LIMS1-201ENST00000332345 NT5DC1Q5TFE4 455 aa15.4■□□□□ 0.06
LIMS1-201ENST00000332345 KCNT2Q6UVM3 1135 aa15.4■□□□□ 0.06
LIMS1-201ENST00000332345 DYMQ7RTS9 669 aa15.4■□□□□ 0.06
LIMS1-201ENST00000332345 HAUS6Q7Z4H7 955 aa15.4■□□□□ 0.06
LIMS1-201ENST00000332345 MICALL1Q8N3F8 863 aa15.4■□□□□ 0.06
LIMS1-201ENST00000332345 KLHL23Q8NBE8 558 aa15.4■□□□□ 0.06
LIMS1-201ENST00000332345 COLGALT1Q8NBJ5 622 aa15.4■□□□□ 0.06
LIMS1-201ENST00000332345 LEO1Q8WVC0 666 aaPredicted RBP15.4■□□□□ 0.06
LIMS1-201ENST00000332345 ZNF558Q96NG5 402 aa15.4■□□□□ 0.06
LIMS1-201ENST00000332345 FAM193BQ96PV7 902 aaPredicted RBP15.4■□□□□ 0.06
LIMS1-201ENST00000332345 ACO2Q99798 780 aaKnown RBP15.4■□□□□ 0.06
LIMS1-201ENST00000332345 PARP2Q9UGN5 583 aa15.4■□□□□ 0.06
LIMS1-201ENST00000332345 PUF60Q9UHX1 559 aaKnown RBP15.4■□□□□ 0.06
LIMS1-201ENST00000332345 TNFSF13BQ9Y275 285 aa15.4■□□□□ 0.06
LIMS1-201ENST00000332345 HES2Q9Y543 173 aa15.4■□□□□ 0.06
LIMS1-201ENST00000332345 A0A087X0B3 334 aa15.39■□□□□ 0.05
LIMS1-201ENST00000332345 MYMKA6NI61 221 aa15.39■□□□□ 0.05
LIMS1-201ENST00000332345 GRM6O15303 877 aa15.39■□□□□ 0.05
LIMS1-201ENST00000332345 POLR2DO15514 142 aaKnown RBP15.39■□□□□ 0.05
LIMS1-201ENST00000332345 MAPTP10636 758 aaKnown RBP15.39■□□□□ 0.05
LIMS1-201ENST00000332345 PPM1AP35813 382 aa15.39■□□□□ 0.05
LIMS1-201ENST00000332345 NCKAP1LP55160 1127 aa15.39■□□□□ 0.05
LIMS1-201ENST00000332345 KRT17Q04695 432 aa15.39■□□□□ 0.05
LIMS1-201ENST00000332345 UBE3AQ05086 875 aa15.39■□□□□ 0.05
LIMS1-201ENST00000332345 RESP18Q5W5W9 173 aa15.39■□□□□ 0.05
LIMS1-201ENST00000332345 ADALQ6DHV7 355 aa15.39■□□□□ 0.05
LIMS1-201ENST00000332345 FAM178BQ8IXR5 827 aa15.39■□□□□ 0.05
LIMS1-201ENST00000332345 THNSL1Q8IYQ7 743 aa15.39■□□□□ 0.05
LIMS1-201ENST00000332345 SPPL3Q8TCT6 385 aa15.39■□□□□ 0.05
LIMS1-201ENST00000332345 KCNN1Q92952 543 aa15.39■□□□□ 0.05
LIMS1-201ENST00000332345 TCHPQ9BT92 498 aa15.39■□□□□ 0.05
LIMS1-201ENST00000332345 APOL6Q9BWW8 343 aa15.39■□□□□ 0.05
LIMS1-201ENST00000332345 TNMDQ9H2S6 317 aa15.39■□□□□ 0.05
LIMS1-201ENST00000332345 NXF3Q9H4D5 531 aaKnown RBP15.39■□□□□ 0.05
LIMS1-201ENST00000332345 ALG13Q9NP73 1137 aaKnown RBP15.39■□□□□ 0.05
LIMS1-201ENST00000332345 TBC1D13Q9NVG8 400 aa15.39■□□□□ 0.05
LIMS1-201ENST00000332345 SPG21Q9NZD8 308 aa15.39■□□□□ 0.05
LIMS1-201ENST00000332345 SEL1LQ9UBV2 794 aa15.39■□□□□ 0.05
LIMS1-201ENST00000332345 USP20Q9Y2K6 914 aa15.39■□□□□ 0.05
LIMS1-201ENST00000332345 ARL5CA6NH57 179 aa15.38■□□□□ 0.05
LIMS1-201ENST00000332345 FGF18O76093 207 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms