RNA–Protein interactions for RNA: ENST00000330687.8

CMTM4-201, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 3,414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-201ENST00000330687 GPCPD1Q9NPB8 672 aa22.03■■□□□ 1.12
CMTM4-201ENST00000330687 RPS6KL1Q9Y6S9 549 aa22.03■■□□□ 1.12
CMTM4-201ENST00000330687 ABCB11O95342 1321 aa22.03■■□□□ 1.12
CMTM4-201ENST00000330687 CLDN3O15551 220 aa22.03■■□□□ 1.12
CMTM4-201ENST00000330687 PYGMP11217 842 aa22.03■■□□□ 1.12
CMTM4-201ENST00000330687 CYP4A11Q02928 519 aa22.03■■□□□ 1.12
CMTM4-201ENST00000330687 KCNA1Q09470 495 aa22.03■■□□□ 1.12
CMTM4-201ENST00000330687 OLFML2BQ68BL8 750 aa22.03■■□□□ 1.12
CMTM4-201ENST00000330687 SNRNP27Q8WVK2 155 aaKnown RBP22.03■■□□□ 1.12
CMTM4-201ENST00000330687 CCDC134Q9H6E4 229 aa22.03■■□□□ 1.12
CMTM4-201ENST00000330687 GALNT8Q9NY28 637 aa22.03■■□□□ 1.12
CMTM4-201ENST00000330687 DNAJC12Q9UKB3 198 aa22.03■■□□□ 1.12
CMTM4-201ENST00000330687 LRCH1Q9Y2L9 728 aa22.03■■□□□ 1.12
CMTM4-201ENST00000330687 POTEFA5A3E0 1075 aa22.03■■□□□ 1.12
CMTM4-201ENST00000330687 PODXLO00592 558 aa22.03■■□□□ 1.12
CMTM4-201ENST00000330687 POTEIP0CG38 1075 aa22.03■■□□□ 1.12
CMTM4-201ENST00000330687 TRIM49P0CI25 452 aa22.03■■□□□ 1.12
CMTM4-201ENST00000330687 TRIM49CP0CI26 452 aa22.03■■□□□ 1.12
CMTM4-201ENST00000330687 CCDC152Q4G0S7 254 aa22.03■■□□□ 1.12
CMTM4-201ENST00000330687 POTEGQ6S5H5 508 aa22.03■■□□□ 1.12
CMTM4-201ENST00000330687 POTEEQ6S8J3 1075 aa22.03■■□□□ 1.12
CMTM4-201ENST00000330687 TRMT1LQ7Z2T5 733 aaKnown RBP22.03■■□□□ 1.12
CMTM4-201ENST00000330687 FAM210AQ96ND0 272 aa22.03■■□□□ 1.12
CMTM4-201ENST00000330687 PRDM11Q9NQV5 511 aa22.03■■□□□ 1.12
CMTM4-201ENST00000330687 CNOT7Q9UIV1 285 aaKnown RBP22.03■■□□□ 1.12
CMTM4-201ENST00000330687 COG5Q9UP83 839 aa22.03■■□□□ 1.12
CMTM4-201ENST00000330687 GYG2O15488 501 aa22.02■■□□□ 1.12
CMTM4-201ENST00000330687 MAP3K7O43318 606 aa22.02■■□□□ 1.12
CMTM4-201ENST00000330687 ACADSP16219 412 aa22.02■■□□□ 1.12
CMTM4-201ENST00000330687 TPP2P29144 1249 aaPredicted RBP22.02■■□□□ 1.12
CMTM4-201ENST00000330687 CHD4Q14839 1912 aa22.02■■□□□ 1.12
CMTM4-201ENST00000330687 ZCWPW2Q504Y3 356 aa22.02■■□□□ 1.12
CMTM4-201ENST00000330687 ZDHHC14Q8IZN3 488 aa22.02■■□□□ 1.12
CMTM4-201ENST00000330687 TAB3Q8N5C8 712 aaPredicted RBP22.02■■□□□ 1.12
CMTM4-201ENST00000330687 DNAJC19Q96DA6 116 aa22.02■■□□□ 1.12
CMTM4-201ENST00000330687 CCNB1P14635 433 aa22.02■■□□□ 1.12
CMTM4-201ENST00000330687 SUSD4Q5VX71 490 aa22.02■■□□□ 1.12
CMTM4-201ENST00000330687 IRGCQ6NXR0 463 aa22.02■■□□□ 1.12
CMTM4-201ENST00000330687 LRRC27Q9C0I9 530 aa22.02■■□□□ 1.12
CMTM4-201ENST00000330687 LRMDAQ9H2I8 198 aa22.02■■□□□ 1.12
CMTM4-201ENST00000330687 GPR75-ASB3A0A0A6YYF3 556 aa22.02■■□□□ 1.11
CMTM4-201ENST00000330687 M0R2N6 131 aa22.02■■□□□ 1.11
CMTM4-201ENST00000330687 CETPP11597 493 aa22.02■■□□□ 1.11
CMTM4-201ENST00000330687 COMTP21964 271 aa22.02■■□□□ 1.11
CMTM4-201ENST00000330687 CYP2J2P51589 502 aa22.02■■□□□ 1.11
CMTM4-201ENST00000330687 LBRQ14739 615 aaKnown RBP22.02■■□□□ 1.11
CMTM4-201ENST00000330687 SFR1Q86XK3 245 aa22.02■■□□□ 1.11
CMTM4-201ENST00000330687 HEMGNQ9BXL5 484 aa22.02■■□□□ 1.11
CMTM4-201ENST00000330687 SDAD1Q9NVU7 687 aaKnown RBP eCLIP22.02■■□□□ 1.11
CMTM4-201ENST00000330687 BSDC1Q9NW68 430 aaPredicted RBP22.02■■□□□ 1.11
CMTM4-201ENST00000330687 SERPINA10Q9UK55 444 aa22.02■■□□□ 1.11
CMTM4-201ENST00000330687 ASB3Q9Y575 518 aa22.02■■□□□ 1.11
CMTM4-201ENST00000330687 WASF2Q9Y6W5 498 aa22.02■■□□□ 1.11
CMTM4-201ENST00000330687 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.01■■□□□ 1.11
CMTM4-201ENST00000330687 SGO2Q562F6 1265 aa22.01■■□□□ 1.11
CMTM4-201ENST00000330687 OR52E8Q6IFG1 317 aa22.01■■□□□ 1.11
CMTM4-201ENST00000330687 BTNL9Q6UXG8 535 aa22.01■■□□□ 1.11
CMTM4-201ENST00000330687 CCDC24Q8N4L8 307 aa22.01■■□□□ 1.11
CMTM4-201ENST00000330687 OPTNQ96CV9 577 aa22.01■■□□□ 1.11
CMTM4-201ENST00000330687 ZNF333Q96JL9 665 aa22.01■■□□□ 1.11
CMTM4-201ENST00000330687 TXNDC9O14530 226 aa22.01■■□□□ 1.11
CMTM4-201ENST00000330687 NEK3P51956 506 aa22.01■■□□□ 1.11
CMTM4-201ENST00000330687 THOC5Q13769 683 aaKnown RBP22.01■■□□□ 1.11
CMTM4-201ENST00000330687 PPP2R5EQ16537 467 aa22.01■■□□□ 1.11
CMTM4-201ENST00000330687 SLFN11Q7Z7L1 901 aa22.01■■□□□ 1.11
CMTM4-201ENST00000330687 MAPKAPK5Q8IW41 473 aa22.01■■□□□ 1.11
CMTM4-201ENST00000330687 NMD3Q96D46 503 aaKnown RBP22.01■■□□□ 1.11
CMTM4-201ENST00000330687 MAGEB18Q96M61 343 aa22.01■■□□□ 1.11
CMTM4-201ENST00000330687 SMC6Q96SB8 1091 aa22.01■■□□□ 1.11
CMTM4-201ENST00000330687 C12orf65Q9H3J6 166 aaKnown RBP22.01■■□□□ 1.11
CMTM4-201ENST00000330687 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.01■■□□□ 1.11
CMTM4-201ENST00000330687 FTLP02792 175 aaPredicted RBP22■■□□□ 1.11
CMTM4-201ENST00000330687 PTGIRP43119 386 aa22■■□□□ 1.11
CMTM4-201ENST00000330687 DYNC1I2Q13409 638 aaKnown RBP22■■□□□ 1.11
CMTM4-201ENST00000330687 LRRC74BQ6ZQY2 392 aa22■■□□□ 1.11
CMTM4-201ENST00000330687 DDX25Q9UHL0 483 aaKnown RBP22■■□□□ 1.11
CMTM4-201ENST00000330687 LNPEPQ9UIQ6 1025 aa22■■□□□ 1.11
CMTM4-201ENST00000330687 LMTK3Q96Q04 1460 aa22■■□□□ 1.11
CMTM4-201ENST00000330687 BAZ2AQ9UIF9 1905 aaKnown RBP22■■□□□ 1.11
CMTM4-201ENST00000330687 GOLGA8RI6L899 631 aa22■■□□□ 1.11
CMTM4-201ENST00000330687 KLRK1P26718 216 aa22■■□□□ 1.11
CMTM4-201ENST00000330687 COILP38432 576 aaPredicted RBP22■■□□□ 1.11
CMTM4-201ENST00000330687 GRM4Q14833 912 aa22■■□□□ 1.11
CMTM4-201ENST00000330687 RNF43Q68DV7 783 aa22■■□□□ 1.11
CMTM4-201ENST00000330687 RNF207Q6ZRF8 634 aa22■■□□□ 1.11
CMTM4-201ENST00000330687 FBXO41Q8TF61 875 aa22■■□□□ 1.11
CMTM4-201ENST00000330687 ZNF384Q8TF68 577 aa22■■□□□ 1.11
CMTM4-201ENST00000330687 SLC20A1Q8WUM9 679 aa22■■□□□ 1.11
CMTM4-201ENST00000330687 CHMP2BQ9UQN3 213 aa22■■□□□ 1.11
CMTM4-201ENST00000330687 CCDC125Q86Z20 511 aa22■■□□□ 1.11
CMTM4-201ENST00000330687 KLF6Q99612 283 aaPredicted RBP22■■□□□ 1.11
CMTM4-201ENST00000330687 ACP6Q9NPH0 428 aa22■■□□□ 1.11
CMTM4-201ENST00000330687 PRKAG3Q9UGI9 489 aa22■■□□□ 1.11
CMTM4-201ENST00000330687 LRP6O75581 1613 aa22■■□□□ 1.11
CMTM4-201ENST00000330687 HNRNPRO43390 633 aaKnown RBP21.99■■□□□ 1.11
CMTM4-201ENST00000330687 TJP3O95049 919 aa21.99■■□□□ 1.11
CMTM4-201ENST00000330687 CETN2P41208 172 aa21.99■■□□□ 1.11
CMTM4-201ENST00000330687 ITGA8P53708 1063 aa21.99■■□□□ 1.11
CMTM4-201ENST00000330687 LARP7Q4G0J3 582 aaKnown RBP eCLIP21.99■■□□□ 1.11
CMTM4-201ENST00000330687 CFAP61Q8NHU2 1237 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms