RNA–Protein interactions for RNA: ENST00000328863.8

CLRN1-203, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-203ENST00000328863 K7ERI5 159 aa16.32■□□□□ 0.2
CLRN1-203ENST00000328863 LPXNO60711 386 aa16.32■□□□□ 0.2
CLRN1-203ENST00000328863 NPTXRO95502 500 aa16.32■□□□□ 0.2
CLRN1-203ENST00000328863 ITGA4P13612 1032 aa16.32■□□□□ 0.2
CLRN1-203ENST00000328863 POU3F3P20264 500 aaPredicted RBP16.32■□□□□ 0.2
CLRN1-203ENST00000328863 ABCD1P33897 745 aa16.32■□□□□ 0.2
CLRN1-203ENST00000328863 DDIT3P35638 169 aa16.32■□□□□ 0.2
CLRN1-203ENST00000328863 ANP32AP39687 249 aaKnown RBP16.32■□□□□ 0.2
CLRN1-203ENST00000328863 SPATA32Q96LK8 384 aa16.32■□□□□ 0.2
CLRN1-203ENST00000328863 PYM1Q9BRP8 204 aaKnown RBP16.32■□□□□ 0.2
CLRN1-203ENST00000328863 EIF2AQ9BY44 585 aaKnown RBP16.32■□□□□ 0.2
CLRN1-203ENST00000328863 MRPL4Q9BYD3 311 aaKnown RBP16.32■□□□□ 0.2
CLRN1-203ENST00000328863 CUEDC2Q9H467 287 aa16.32■□□□□ 0.2
CLRN1-203ENST00000328863 ZHX3Q9H4I2 956 aa16.32■□□□□ 0.2
CLRN1-203ENST00000328863 PDZD7Q9H5P4 517 aa16.32■□□□□ 0.2
CLRN1-203ENST00000328863 POLD4Q9HCU8 107 aa16.32■□□□□ 0.2
CLRN1-203ENST00000328863 FAM13BQ9NYF5 915 aa16.32■□□□□ 0.2
CLRN1-203ENST00000328863 PRRC2BQ5JSZ5 2229 aaKnown RBP16.31■□□□□ 0.2
CLRN1-203ENST00000328863 NPHP3-ACAD11A0A0J9YXS1 232 aa16.31■□□□□ 0.2
CLRN1-203ENST00000328863 ZNF131P52739 623 aa16.31■□□□□ 0.2
CLRN1-203ENST00000328863 RNASELQ05823 741 aaKnown RBP16.31■□□□□ 0.2
CLRN1-203ENST00000328863 LONRF3Q496Y0 759 aa16.31■□□□□ 0.2
CLRN1-203ENST00000328863 ARSHQ5FYA8 562 aa16.31■□□□□ 0.2
CLRN1-203ENST00000328863 NOMO2Q5JPE7 1267 aa16.31■□□□□ 0.2
CLRN1-203ENST00000328863 ATF7IP2Q5U623 682 aa16.31■□□□□ 0.2
CLRN1-203ENST00000328863 SV2BQ7L1I2 683 aa16.31■□□□□ 0.2
CLRN1-203ENST00000328863 MRPL10Q7Z7H8 261 aaKnown RBP16.31■□□□□ 0.2
CLRN1-203ENST00000328863 THNSL1Q8IYQ7 743 aa16.31■□□□□ 0.2
CLRN1-203ENST00000328863 PDILTQ8N807 584 aa16.31■□□□□ 0.2
CLRN1-203ENST00000328863 COLGALT1Q8NBJ5 622 aa16.31■□□□□ 0.2
CLRN1-203ENST00000328863 SMG8Q8ND04 991 aaKnown RBP16.31■□□□□ 0.2
CLRN1-203ENST00000328863 SLC17A8Q8NDX2 589 aa16.31■□□□□ 0.2
CLRN1-203ENST00000328863 MRPL38Q96DV4 380 aaKnown RBP16.31■□□□□ 0.2
CLRN1-203ENST00000328863 ZNF558Q96NG5 402 aa16.31■□□□□ 0.2
CLRN1-203ENST00000328863 APOL6Q9BWW8 343 aa16.31■□□□□ 0.2
CLRN1-203ENST00000328863 NXF3Q9H4D5 531 aaKnown RBP16.31■□□□□ 0.2
CLRN1-203ENST00000328863 MAGEF1Q9HAY2 307 aa16.31■□□□□ 0.2
CLRN1-203ENST00000328863 TYW1Q9NV66 732 aaKnown RBP16.31■□□□□ 0.2
CLRN1-203ENST00000328863 ZDHHC9Q9Y397 364 aa16.31■□□□□ 0.2
CLRN1-203ENST00000328863 MTCH2Q9Y6C9 303 aa16.31■□□□□ 0.2
CLRN1-203ENST00000328863 CITO14578 2027 aa16.3■□□□□ 0.2
CLRN1-203ENST00000328863 SFI1A8K8P3 1242 aa16.3■□□□□ 0.2
CLRN1-203ENST00000328863 SLC16A4O15374 487 aa16.3■□□□□ 0.2
CLRN1-203ENST00000328863 MLH1P40692 756 aa16.3■□□□□ 0.2
CLRN1-203ENST00000328863 NCKAP1LP55160 1127 aa16.3■□□□□ 0.2
CLRN1-203ENST00000328863 UBE3AQ05086 875 aa16.3■□□□□ 0.2
CLRN1-203ENST00000328863 ZNF568Q3ZCX4 644 aa16.3■□□□□ 0.2
CLRN1-203ENST00000328863 SHC4Q6S5L8 630 aa16.3■□□□□ 0.2
CLRN1-203ENST00000328863 AGMOQ6ZNB7 445 aa16.3■□□□□ 0.2
CLRN1-203ENST00000328863 CDR2LQ86X02 465 aaPredicted RBP16.3■□□□□ 0.2
CLRN1-203ENST00000328863 FAM178BQ8IXR5 827 aa16.3■□□□□ 0.2
CLRN1-203ENST00000328863 MYCT1Q8N699 235 aa16.3■□□□□ 0.2
CLRN1-203ENST00000328863 RPS6KC1Q96S38 1066 aa16.3■□□□□ 0.2
CLRN1-203ENST00000328863 LRRC27Q9C0I9 530 aa16.3■□□□□ 0.2
CLRN1-203ENST00000328863 SCAND2PQ9GZW5 306 aaPredicted RBP16.3■□□□□ 0.2
CLRN1-203ENST00000328863 TNMDQ9H2S6 317 aa16.3■□□□□ 0.2
CLRN1-203ENST00000328863 CWH43Q9H720 699 aa16.3■□□□□ 0.2
CLRN1-203ENST00000328863 TBC1D13Q9NVG8 400 aa16.3■□□□□ 0.2
CLRN1-203ENST00000328863 KANSL3Q9P2N6 904 aa16.3■□□□□ 0.2
CLRN1-203ENST00000328863 HCSTQ9UBK5 93 aa16.3■□□□□ 0.2
CLRN1-203ENST00000328863 GIT1Q9Y2X7 761 aa16.3■□□□□ 0.2
CLRN1-203ENST00000328863 A0A087X0B3 334 aa16.29■□□□□ 0.2
CLRN1-203ENST00000328863 MEIS3P2A8K0S8 358 aa16.29■□□□□ 0.2
CLRN1-203ENST00000328863 ZC3H11AO75152 810 aaKnown RBP eCLIP16.29■□□□□ 0.2
CLRN1-203ENST00000328863 EDN1P05305 212 aa16.29■□□□□ 0.2
CLRN1-203ENST00000328863 GIT2Q14161 759 aa16.29■□□□□ 0.2
CLRN1-203ENST00000328863 AXDND1Q5T1B0 1012 aaPredicted RBP16.29■□□□□ 0.2
CLRN1-203ENST00000328863 IQUBQ8NA54 791 aa16.29■□□□□ 0.2
CLRN1-203ENST00000328863 KLHL23Q8NBE8 558 aa16.29■□□□□ 0.2
CLRN1-203ENST00000328863 TMEM161BQ8NDZ6 487 aa16.29■□□□□ 0.2
CLRN1-203ENST00000328863 LEO1Q8WVC0 666 aaPredicted RBP16.29■□□□□ 0.2
CLRN1-203ENST00000328863 KCNN1Q92952 543 aa16.29■□□□□ 0.2
CLRN1-203ENST00000328863 DHX58Q96C10 678 aa16.29■□□□□ 0.2
CLRN1-203ENST00000328863 BICD1Q96G01 975 aa16.29■□□□□ 0.2
CLRN1-203ENST00000328863 FAM193BQ96PV7 902 aaPredicted RBP16.29■□□□□ 0.2
CLRN1-203ENST00000328863 NTPCRQ9BSD7 190 aaKnown RBP16.29■□□□□ 0.2
CLRN1-203ENST00000328863 SEL1LQ9UBV2 794 aa16.29■□□□□ 0.2
CLRN1-203ENST00000328863 RCOR1Q9UKL0 485 aa16.29■□□□□ 0.2
CLRN1-203ENST00000328863 PCDHA7Q9UN72 937 aa16.29■□□□□ 0.2
CLRN1-203ENST00000328863 TNFSF13BQ9Y275 285 aa16.29■□□□□ 0.2
CLRN1-203ENST00000328863 HES2Q9Y543 173 aa16.29■□□□□ 0.2
CLRN1-203ENST00000328863 INPPL1O15357 1258 aa16.28■□□□□ 0.2
CLRN1-203ENST00000328863 TRAK2O60296 914 aa16.28■□□□□ 0.2
CLRN1-203ENST00000328863 OFD1O75665 1012 aa16.28■□□□□ 0.2
CLRN1-203ENST00000328863 MAPTP10636 758 aaKnown RBP16.28■□□□□ 0.2
CLRN1-203ENST00000328863 GAP43P17677 238 aa16.28■□□□□ 0.2
CLRN1-203ENST00000328863 AMPD3Q01432 767 aa16.28■□□□□ 0.2
CLRN1-203ENST00000328863 RESP18Q5W5W9 173 aa16.28■□□□□ 0.2
CLRN1-203ENST00000328863 KCNT2Q6UVM3 1135 aa16.28■□□□□ 0.2
CLRN1-203ENST00000328863 LRRC55Q6ZSA7 311 aa16.28■□□□□ 0.2
CLRN1-203ENST00000328863 DYMQ7RTS9 669 aa16.28■□□□□ 0.2
CLRN1-203ENST00000328863 PPM1EQ8WY54 764 aa16.28■□□□□ 0.2
CLRN1-203ENST00000328863 DDX12PQ92771 950 aa16.28■□□□□ 0.2
CLRN1-203ENST00000328863 PPP2R3CQ969Q6 453 aa16.28■□□□□ 0.2
CLRN1-203ENST00000328863 ANKFY1Q9P2R3 1169 aa16.28■□□□□ 0.2
CLRN1-203ENST00000328863 PDCD11Q14690 1871 aaKnown RBP16.28■□□□□ 0.2
CLRN1-203ENST00000328863 CUL9Q8IWT3 2517 aa16.27■□□□□ 0.2
CLRN1-203ENST00000328863 ARL5CA6NH57 179 aa16.27■□□□□ 0.2
CLRN1-203ENST00000328863 TTLL13PA6NNM8 815 aa16.27■□□□□ 0.2
CLRN1-203ENST00000328863 HNRNPDLO14979 420 aaKnown RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms