RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 JDP2Q8WYK2 163 aa15.13■□□□□ 0.01
ATP2C1-201ENST00000328560 TOPORSQ9NS56 1045 aaPredicted RBP15.13■□□□□ 0.01
ATP2C1-201ENST00000328560 KCND2Q9NZV8 630 aa15.13■□□□□ 0.01
ATP2C1-201ENST00000328560 UBE4BO95155 1302 aa15.13■□□□□ 0.01
ATP2C1-201ENST00000328560 SIPA1L1O43166 1804 aa15.13■□□□□ 0.01
ATP2C1-201ENST00000328560 MMEP08473 750 aa15.13■□□□□ 0.01
ATP2C1-201ENST00000328560 BIRC3Q13489 604 aa15.13■□□□□ 0.01
ATP2C1-201ENST00000328560 NFIL3Q16649 462 aa15.13■□□□□ 0.01
ATP2C1-201ENST00000328560 SEL1L2Q5TEA6 688 aa15.13■□□□□ 0.01
ATP2C1-201ENST00000328560 NOP9Q86U38 636 aaKnown RBP15.13■□□□□ 0.01
ATP2C1-201ENST00000328560 ATP8B4Q8TF62 1192 aa15.13■□□□□ 0.01
ATP2C1-201ENST00000328560 TMEM117Q9H0C3 514 aa15.13■□□□□ 0.01
ATP2C1-201ENST00000328560 RASAL2Q9UJF2 1139 aa15.13■□□□□ 0.01
ATP2C1-201ENST00000328560 TCRBV7S2A1N4TA0A589 114 aa15.13■□□□□ 0.01
ATP2C1-201ENST00000328560 PHF20L1A8MW92 1017 aa15.13■□□□□ 0.01
ATP2C1-201ENST00000328560 FAM107AO95990 144 aa15.13■□□□□ 0.01
ATP2C1-201ENST00000328560 KRT5P13647 590 aa15.13■□□□□ 0.01
ATP2C1-201ENST00000328560 PLS3P13797 630 aa15.13■□□□□ 0.01
ATP2C1-201ENST00000328560 UGCGQ16739 394 aa15.13■□□□□ 0.01
ATP2C1-201ENST00000328560 CPLX4Q7Z7G2 160 aa15.13■□□□□ 0.01
ATP2C1-201ENST00000328560 EIF1ADQ8N9N8 165 aaKnown RBP15.13■□□□□ 0.01
ATP2C1-201ENST00000328560 ZNF653Q96CK0 615 aa15.13■□□□□ 0.01
ATP2C1-201ENST00000328560 CYFIP2Q96F07 1278 aa15.13■□□□□ 0.01
ATP2C1-201ENST00000328560 FEM1BQ9UK73 627 aa15.13■□□□□ 0.01
ATP2C1-201ENST00000328560 ADRB2P07550 413 aa15.12■□□□□ 0.01
ATP2C1-201ENST00000328560 CAP2P40123 477 aa15.12■□□□□ 0.01
ATP2C1-201ENST00000328560 POU5F1Q01860 360 aaKnown RBP15.12■□□□□ 0.01
ATP2C1-201ENST00000328560 TKFCQ3LXA3 575 aa15.12■□□□□ 0.01
ATP2C1-201ENST00000328560 DENND2CQ68D51 928 aa15.12■□□□□ 0.01
ATP2C1-201ENST00000328560 FMNL3Q8IVF7 1028 aa15.12■□□□□ 0.01
ATP2C1-201ENST00000328560 DHX38Q92620 1227 aaKnown RBP15.12■□□□□ 0.01
ATP2C1-201ENST00000328560 TAAR1Q96RJ0 339 aa15.12■□□□□ 0.01
ATP2C1-201ENST00000328560 PYGMP11217 842 aa15.12■□□□□ 0.01
ATP2C1-201ENST00000328560 PMS2P54278 862 aa15.12■□□□□ 0.01
ATP2C1-201ENST00000328560 SNX1Q13596 522 aa15.12■□□□□ 0.01
ATP2C1-201ENST00000328560 NUP85Q9BW27 656 aa15.12■□□□□ 0.01
ATP2C1-201ENST00000328560 VCAM1P19320 739 aa15.12■□□□□ 0.01
ATP2C1-201ENST00000328560 FGFR4P22455 802 aa15.12■□□□□ 0.01
ATP2C1-201ENST00000328560 QPCTQ16769 361 aa15.12■□□□□ 0.01
ATP2C1-201ENST00000328560 UBAP2Q5T6F2 1119 aaKnown RBP15.12■□□□□ 0.01
ATP2C1-201ENST00000328560 DUPD1Q68J44 220 aa15.12■□□□□ 0.01
ATP2C1-201ENST00000328560 CCDC137Q6PK04 289 aaKnown RBP15.12■□□□□ 0.01
ATP2C1-201ENST00000328560 SLC9A9Q8IVB4 645 aa15.12■□□□□ 0.01
ATP2C1-201ENST00000328560 PRELID2Q8N945 189 aa15.12■□□□□ 0.01
ATP2C1-201ENST00000328560 RAPGEF5Q92565 580 aa15.12■□□□□ 0.01
ATP2C1-201ENST00000328560 PSMD1Q99460 953 aa15.12■□□□□ 0.01
ATP2C1-201ENST00000328560 SYNPO2Q9UMS6 1093 aa15.12■□□□□ 0.01
ATP2C1-201ENST00000328560 ANKRD63C9JTQ0 380 aa15.11■□□□□ 0.01
ATP2C1-201ENST00000328560 ATP9AO75110 1047 aa15.11■□□□□ 0.01
ATP2C1-201ENST00000328560 SPP2Q13103 211 aa15.11■□□□□ 0.01
ATP2C1-201ENST00000328560 SLC29A2Q14542 456 aa15.11■□□□□ 0.01
ATP2C1-201ENST00000328560 C2CD6Q53TS8 623 aa15.11■□□□□ 0.01
ATP2C1-201ENST00000328560 NEK9Q8TD19 979 aa15.11■□□□□ 0.01
ATP2C1-201ENST00000328560 SEMA4DQ92854 862 aa15.11■□□□□ 0.01
ATP2C1-201ENST00000328560 CABS1Q96KC9 395 aa15.11■□□□□ 0.01
ATP2C1-201ENST00000328560 ZSWIM1Q9BR11 485 aa15.11■□□□□ 0.01
ATP2C1-201ENST00000328560 PI4K2AQ9BTU6 479 aa15.11■□□□□ 0.01
ATP2C1-201ENST00000328560 TRPC6Q9Y210 931 aa15.11■□□□□ 0.01
ATP2C1-201ENST00000328560 GOLGA6L7A0A1B0GV03 622 aa15.11■□□□□ 0.01
ATP2C1-201ENST00000328560 RTN2O75298 545 aa15.11■□□□□ 0.01
ATP2C1-201ENST00000328560 C1orf220Q5T0J3 134 aa15.11■□□□□ 0.01
ATP2C1-201ENST00000328560 ZNF564Q8TBZ8 553 aaPredicted RBP15.11■□□□□ 0.01
ATP2C1-201ENST00000328560 EPS8L1Q8TE68 723 aa15.11■□□□□ 0.01
ATP2C1-201ENST00000328560 KREMEN1Q96MU8 473 aa15.11■□□□□ 0.01
ATP2C1-201ENST00000328560 SEMA4AQ9H3S1 761 aa15.11■□□□□ 0.01
ATP2C1-201ENST00000328560 AGO4Q9HCK5 861 aaKnown RBP15.11■□□□□ 0.01
ATP2C1-201ENST00000328560 DNAJC17Q9NVM6 304 aaKnown RBP15.11■□□□□ 0.01
ATP2C1-201ENST00000328560 SLC12A6Q9UHW9 1150 aa15.11■□□□□ 0.01
ATP2C1-201ENST00000328560 USP20Q9Y2K6 914 aa15.11■□□□□ 0.01
ATP2C1-201ENST00000328560 DIS3Q9Y2L1 958 aaKnown RBP15.11■□□□□ 0.01
ATP2C1-201ENST00000328560 RPL21P46778 160 aaKnown RBP15.11■□□□□ 0.01
ATP2C1-201ENST00000328560 MRPS9P82933 396 aaKnown RBP15.11■□□□□ 0.01
ATP2C1-201ENST00000328560 RASA3Q14644 834 aa15.11■□□□□ 0.01
ATP2C1-201ENST00000328560 SNRNP35Q16560 246 aaKnown RBP15.11■□□□□ 0.01
ATP2C1-201ENST00000328560 TTC27Q6P3X3 843 aa15.11■□□□□ 0.01
ATP2C1-201ENST00000328560 MYH11P35749 1972 aa15.1■□□□□ 0.01
ATP2C1-201ENST00000328560 SYNGAP1Q96PV0 1343 aa15.1■□□□□ 0.01
ATP2C1-201ENST00000328560 QSER1Q2KHR3 1735 aa15.1■□□□□ 0.01
ATP2C1-201ENST00000328560 KIAA0391O15091 583 aaKnown RBP15.1■□□□□ 0.01
ATP2C1-201ENST00000328560 DHX15O43143 795 aaKnown RBP15.1■□□□□ 0.01
ATP2C1-201ENST00000328560 PHF2O75151 1096 aa15.1■□□□□ 0.01
ATP2C1-201ENST00000328560 ICAM1P05362 532 aa15.1■□□□□ 0.01
ATP2C1-201ENST00000328560 PPP1R7Q15435 360 aa15.1■□□□□ 0.01
ATP2C1-201ENST00000328560 CHADLQ6NUI6 762 aa15.1■□□□□ 0.01
ATP2C1-201ENST00000328560 CCDC121Q6ZUS5 278 aa15.1■□□□□ 0.01
ATP2C1-201ENST00000328560 ZDHHC14Q8IZN3 488 aa15.1■□□□□ 0.01
ATP2C1-201ENST00000328560 AZI2Q9H6S1 392 aa15.1■□□□□ 0.01
ATP2C1-201ENST00000328560 TTC7AQ9ULT0 858 aaPredicted RBP15.1■□□□□ 0.01
ATP2C1-201ENST00000328560 CTNND1O60716 968 aaKnown RBP15.1■□□□□ 0.01
ATP2C1-201ENST00000328560 CHRNB2P17787 502 aa15.1■□□□□ 0.01
ATP2C1-201ENST00000328560 MUTP22033 750 aa15.1■□□□□ 0.01
ATP2C1-201ENST00000328560 CDR1P51861 262 aa15.1■□□□□ 0.01
ATP2C1-201ENST00000328560 MNAT1P51948 309 aa15.1■□□□□ 0.01
ATP2C1-201ENST00000328560 NBPF9Q3BBW0 867 aa15.1■□□□□ 0.01
ATP2C1-201ENST00000328560 AGBL2Q5U5Z8 902 aa15.1■□□□□ 0.01
ATP2C1-201ENST00000328560 LMBRD2Q68DH5 695 aaPredicted RBP15.1■□□□□ 0.01
ATP2C1-201ENST00000328560 B3GNT9Q6UX72 402 aa15.1■□□□□ 0.01
ATP2C1-201ENST00000328560 C7orf43Q8WVR3 580 aa15.1■□□□□ 0.01
ATP2C1-201ENST00000328560 C1orf54Q8WWF1 131 aa15.1■□□□□ 0.01
ATP2C1-201ENST00000328560 CEP89Q96ST8 783 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms