RNA–Protein interactions for RNA: ENST00000328495.9

CCDC144A-201, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 3,375 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-201ENST00000328495 GRM7Q14831 915 aa2.29□□□□□ -2.04
CCDC144A-201ENST00000328495 PCBP1Q15365 356 aaKnown RBP eCLIP2.29□□□□□ -2.04
CCDC144A-201ENST00000328495 GAGE13Q4V321 117 aa2.29□□□□□ -2.04
CCDC144A-201ENST00000328495 PLEKHG4Q58EX7 1191 aa2.29□□□□□ -2.04
CCDC144A-201ENST00000328495 GPR158Q5T848 1215 aa2.29□□□□□ -2.04
CCDC144A-201ENST00000328495 KRT40Q6A162 431 aa2.29□□□□□ -2.04
CCDC144A-201ENST00000328495 MAMDC4Q6UXC1 1216 aa2.29□□□□□ -2.04
CCDC144A-201ENST00000328495 KANSL1Q7Z3B3 1105 aa2.29□□□□□ -2.04
CCDC144A-201ENST00000328495 GPR135Q8IZ08 494 aa2.29□□□□□ -2.04
CCDC144A-201ENST00000328495 D2HGDHQ8N465 521 aa2.29□□□□□ -2.04
CCDC144A-201ENST00000328495 SMC1BQ8NDV3 1235 aa2.29□□□□□ -2.04
CCDC144A-201ENST00000328495 NKD2Q969F2 451 aaPredicted RBP2.29□□□□□ -2.04
CCDC144A-201ENST00000328495 HIST1H2AHQ96KK5 128 aa2.29□□□□□ -2.04
CCDC144A-201ENST00000328495 GPR101Q96P66 508 aaPredicted RBP2.29□□□□□ -2.04
CCDC144A-201ENST00000328495 MPHOSPH9Q99550 1183 aa2.29□□□□□ -2.04
CCDC144A-201ENST00000328495 HIST1H2AJQ99878 128 aa2.29□□□□□ -2.04
CCDC144A-201ENST00000328495 TMPRSS5Q9H3S3 457 aa2.29□□□□□ -2.04
CCDC144A-201ENST00000328495 DNAI1Q9UI46 699 aa2.29□□□□□ -2.04
CCDC144A-201ENST00000328495 TMA7Q9Y2S6 64 aaKnown RBP2.29□□□□□ -2.04
CCDC144A-201ENST00000328495 A0A0A6YYJ9 748 aa2.29□□□□□ -2.04
CCDC144A-201ENST00000328495 LSP1P33241 339 aa2.29□□□□□ -2.04
CCDC144A-201ENST00000328495 ADCY7P51828 1080 aa2.29□□□□□ -2.04
CCDC144A-201ENST00000328495 ANTXR2P58335 489 aa2.29□□□□□ -2.04
CCDC144A-201ENST00000328495 CLEC14AQ86T13 490 aa2.29□□□□□ -2.04
CCDC144A-201ENST00000328495 PLA2G15Q8NCC3 412 aa2.29□□□□□ -2.04
CCDC144A-201ENST00000328495 NOL10Q9BSC4 688 aaKnown RBP2.29□□□□□ -2.04
CCDC144A-201ENST00000328495 SLKQ9H2G2 1235 aaPredicted RBP2.29□□□□□ -2.04
CCDC144A-201ENST00000328495 C14orf93Q9H972 538 aaKnown RBP2.29□□□□□ -2.04
CCDC144A-201ENST00000328495 TBX22Q9Y458 520 aa2.29□□□□□ -2.04
CCDC144A-201ENST00000328495 ABCA5Q8WWZ7 1642 aa2.29□□□□□ -2.04
CCDC144A-201ENST00000328495 NEO1Q92859 1461 aa2.29□□□□□ -2.04
CCDC144A-201ENST00000328495 C2orf78A6NCI8 922 aa2.29□□□□□ -2.04
CCDC144A-201ENST00000328495 GSG1L2A8MUP6 293 aa2.29□□□□□ -2.04
CCDC144A-201ENST00000328495 CAPN14A8MX76 684 aa2.29□□□□□ -2.04
CCDC144A-201ENST00000328495 PDE8AO60658 829 aa2.29□□□□□ -2.04
CCDC144A-201ENST00000328495 OPHN1O60890 802 aa2.29□□□□□ -2.04
CCDC144A-201ENST00000328495 MYCLP1P12525 358 aaPredicted RBP2.29□□□□□ -2.04
CCDC144A-201ENST00000328495 C6P13671 934 aa2.29□□□□□ -2.04
CCDC144A-201ENST00000328495 PHC1P78364 1004 aa2.29□□□□□ -2.04
CCDC144A-201ENST00000328495 SMAD3P84022 425 aaKnown RBP2.29□□□□□ -2.04
CCDC144A-201ENST00000328495 FOXL1Q12952 345 aa2.29□□□□□ -2.04
CCDC144A-201ENST00000328495 SEPT7Q16181 437 aaKnown RBP2.29□□□□□ -2.04
CCDC144A-201ENST00000328495 NRN1LQ496H8 165 aa2.29□□□□□ -2.04
CCDC144A-201ENST00000328495 RNF207Q6ZRF8 634 aa2.29□□□□□ -2.04
CCDC144A-201ENST00000328495 USP51Q70EK9 711 aa2.29□□□□□ -2.04
CCDC144A-201ENST00000328495 ZNF808Q8N4W9 903 aaPredicted RBP2.29□□□□□ -2.04
CCDC144A-201ENST00000328495 ANKRD53Q8N9V6 530 aa2.29□□□□□ -2.04
CCDC144A-201ENST00000328495 ZNF610Q8N9Z0 462 aa2.29□□□□□ -2.04
CCDC144A-201ENST00000328495 TMEM176AQ96HP8 235 aa2.29□□□□□ -2.04
CCDC144A-201ENST00000328495 TLR9Q9NR96 1032 aa2.29□□□□□ -2.04
CCDC144A-201ENST00000328495 AURKAIP1Q9NWT8 199 aaPredicted RBP2.29□□□□□ -2.04
CCDC144A-201ENST00000328495 MSRAQ9UJ68 235 aa2.29□□□□□ -2.04
CCDC144A-201ENST00000328495 RCAN3Q9UKA8 241 aa2.29□□□□□ -2.04
CCDC144A-201ENST00000328495 MAPRE3Q9UPY8 281 aa2.29□□□□□ -2.04
CCDC144A-201ENST00000328495 CFAP74Q9C0B2 1584 aa2.28□□□□□ -2.04
CCDC144A-201ENST00000328495 RAB11FIP3O75154 756 aa2.28□□□□□ -2.04
CCDC144A-201ENST00000328495 FSBPO95073 299 aa2.28□□□□□ -2.04
CCDC144A-201ENST00000328495 FKBP9O95302 570 aa2.28□□□□□ -2.04
CCDC144A-201ENST00000328495 JUNP05412 331 aaKnown RBP2.28□□□□□ -2.04
CCDC144A-201ENST00000328495 VSIG10L2P0DP72 767 aa2.28□□□□□ -2.04
CCDC144A-201ENST00000328495 ACRV1P26436 265 aa2.28□□□□□ -2.04
CCDC144A-201ENST00000328495 CCR10P46092 362 aa2.28□□□□□ -2.04
CCDC144A-201ENST00000328495 USP39Q53GS9 565 aaKnown RBP2.28□□□□□ -2.04
CCDC144A-201ENST00000328495 CRIP3Q6Q6R5 217 aa2.28□□□□□ -2.04
CCDC144A-201ENST00000328495 Q6ZSN1 163 aa2.28□□□□□ -2.04
CCDC144A-201ENST00000328495 FKBP9P1Q75LS8 142 aa2.28□□□□□ -2.04
CCDC144A-201ENST00000328495 SGMS1Q86VZ5 419 aa2.28□□□□□ -2.04
CCDC144A-201ENST00000328495 ANKRD35Q8N283 1001 aa2.28□□□□□ -2.04
CCDC144A-201ENST00000328495 CDYL2Q8N8U2 506 aa2.28□□□□□ -2.04
CCDC144A-201ENST00000328495 LEO1Q8WVC0 666 aaPredicted RBP2.28□□□□□ -2.04
CCDC144A-201ENST00000328495 USP7Q93009 1102 aa2.28□□□□□ -2.04
CCDC144A-201ENST00000328495 RPL10LQ96L21 214 aaKnown RBP2.28□□□□□ -2.04
CCDC144A-201ENST00000328495 UIMC1Q96RL1 719 aa2.28□□□□□ -2.04
CCDC144A-201ENST00000328495 ZNF747Q9BV97 191 aa2.28□□□□□ -2.04
CCDC144A-201ENST00000328495 OSBPL6Q9BZF3 934 aa2.28□□□□□ -2.04
CCDC144A-201ENST00000328495 SRRDQ9UH36 339 aa2.28□□□□□ -2.04
CCDC144A-201ENST00000328495 STXBP5LQ9Y2K9 1186 aa2.28□□□□□ -2.04
CCDC144A-201ENST00000328495 GIT1Q9Y2X7 761 aa2.28□□□□□ -2.04
CCDC144A-201ENST00000328495 PCDHB6Q9Y5E3 794 aa2.28□□□□□ -2.04
CCDC144A-201ENST00000328495 PRAG1Q86YV5 1406 aa2.28□□□□□ -2.04
CCDC144A-201ENST00000328495 SAMD9Q5K651 1589 aa2.28□□□□□ -2.04
CCDC144A-201ENST00000328495 ZFHX2Q9C0A1 2572 aaPredicted RBP2.28□□□□□ -2.04
CCDC144A-201ENST00000328495 TGM5O43548 720 aa2.28□□□□□ -2.04
CCDC144A-201ENST00000328495 NRP2O60462 931 aa2.28□□□□□ -2.04
CCDC144A-201ENST00000328495 TOX4O94842 621 aa2.28□□□□□ -2.04
CCDC144A-201ENST00000328495 HIBADHP31937 336 aaKnown RBP2.28□□□□□ -2.04
CCDC144A-201ENST00000328495 STAT3P40763 770 aa2.28□□□□□ -2.04
CCDC144A-201ENST00000328495 ADCYAP1R1P41586 468 aa2.28□□□□□ -2.04
CCDC144A-201ENST00000328495 GDF5P43026 501 aa2.28□□□□□ -2.04
CCDC144A-201ENST00000328495 GAREM2Q75VX8 874 aa2.28□□□□□ -2.04
CCDC144A-201ENST00000328495 TCF25Q9BQ70 676 aa2.28□□□□□ -2.04
CCDC144A-201ENST00000328495 ZNF341Q9BYN7 854 aa2.28□□□□□ -2.04
CCDC144A-201ENST00000328495 AGO3Q9H9G7 860 aaKnown RBP2.28□□□□□ -2.04
CCDC144A-201ENST00000328495 IL23AQ9NPF7 189 aa2.28□□□□□ -2.04
CCDC144A-201ENST00000328495 SPTLC3Q9NUV7 552 aa2.28□□□□□ -2.04
CCDC144A-201ENST00000328495 MYPNQ86TC9 1320 aa2.28□□□□□ -2.05
CCDC144A-201ENST00000328495 DNMBPQ6XZF7 1577 aa2.28□□□□□ -2.05
CCDC144A-201ENST00000328495 NRP1O14786 923 aa2.27□□□□□ -2.05
CCDC144A-201ENST00000328495 MTSS1O43312 755 aa2.27□□□□□ -2.05
CCDC144A-201ENST00000328495 FZD7O75084 574 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms