RNA–Protein interactions for RNA: ENST00000327702.11

CACNA1C-201, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-201ENST00000327702 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.47□□□□□ -0.572e-6■■■■■ 45.2
CACNA1C-201ENST00000327702 GRAMD1AQ96CP6 724 aa11.47□□□□□ -0.57
CACNA1C-201ENST00000327702 PAIP2BQ9ULR5 123 aaKnown RBP11.47□□□□□ -0.57
CACNA1C-201ENST00000327702 MYO1CO00159 1063 aa11.47□□□□□ -0.57
CACNA1C-201ENST00000327702 AKAP10O43572 662 aa11.47□□□□□ -0.57
CACNA1C-201ENST00000327702 SRP72O76094 671 aaKnown RBP11.47□□□□□ -0.57
CACNA1C-201ENST00000327702 ADRA2BP18089 450 aa11.47□□□□□ -0.57
CACNA1C-201ENST00000327702 PDIA2Q13087 525 aaKnown RBP11.47□□□□□ -0.57
CACNA1C-201ENST00000327702 C16orf89Q6UX73 402 aa11.47□□□□□ -0.57
CACNA1C-201ENST00000327702 FAM160B2Q86V87 743 aa11.47□□□□□ -0.57
CACNA1C-201ENST00000327702 NUP93Q8N1F7 819 aa11.47□□□□□ -0.57
CACNA1C-201ENST00000327702 PAGE5Q96GU1 130 aa11.47□□□□□ -0.57
CACNA1C-201ENST00000327702 PPP1R36Q96LQ0 422 aa11.47□□□□□ -0.57
CACNA1C-201ENST00000327702 FAM49AQ9H0Q0 323 aaPredicted RBP11.47□□□□□ -0.57
CACNA1C-201ENST00000327702 LGR6Q9HBX8 967 aa11.47□□□□□ -0.57
CACNA1C-201ENST00000327702 DNAJC12Q9UKB3 198 aa11.47□□□□□ -0.57
CACNA1C-201ENST00000327702 STAP1Q9ULZ2 295 aa11.47□□□□□ -0.57
CACNA1C-201ENST00000327702 ASMTLO95671 621 aa11.47□□□□□ -0.57
CACNA1C-201ENST00000327702 RALAP11233 206 aa11.47□□□□□ -0.57
CACNA1C-201ENST00000327702 GPS1Q13098 491 aa11.47□□□□□ -0.57
CACNA1C-201ENST00000327702 DPCR1Q3MIW9 517 aa11.47□□□□□ -0.57
CACNA1C-201ENST00000327702 RC3H1Q5TC82 1133 aaKnown RBP11.47□□□□□ -0.57
CACNA1C-201ENST00000327702 GINS4Q9BRT9 223 aa11.47□□□□□ -0.57
CACNA1C-201ENST00000327702 USP44Q9H0E7 712 aa11.47□□□□□ -0.57
CACNA1C-201ENST00000327702 KIAA1586Q9HCI6 787 aa11.47□□□□□ -0.57
CACNA1C-201ENST00000327702 RASSF9O75901 435 aa11.47□□□□□ -0.57
CACNA1C-201ENST00000327702 IREB2P48200 963 aaKnown RBP11.47□□□□□ -0.57
CACNA1C-201ENST00000327702 CDR2LQ86X02 465 aaPredicted RBP11.47□□□□□ -0.57
CACNA1C-201ENST00000327702 DIS3LQ8TF46 1054 aaKnown RBP11.47□□□□□ -0.57
CACNA1C-201ENST00000327702 NUP85Q9BW27 656 aa11.47□□□□□ -0.57
CACNA1C-201ENST00000327702 KRCC1Q9NPI7 259 aaPredicted RBP11.47□□□□□ -0.57
CACNA1C-201ENST00000327702 TOPORSQ9NS56 1045 aaPredicted RBP11.47□□□□□ -0.57
CACNA1C-201ENST00000327702 CEP72Q9P209 647 aa11.47□□□□□ -0.57
CACNA1C-201ENST00000327702 MKL2Q9ULH7 1088 aa11.47□□□□□ -0.57
CACNA1C-201ENST00000327702 A0A1W2PP64 1363 aa11.47□□□□□ -0.57
CACNA1C-201ENST00000327702 XDHP47989 1333 aa11.47□□□□□ -0.57
CACNA1C-201ENST00000327702 TLR2O60603 784 aa11.46□□□□□ -0.57
CACNA1C-201ENST00000327702 MMP1P03956 469 aa11.46□□□□□ -0.57
CACNA1C-201ENST00000327702 SERPINB1P30740 379 aa11.46□□□□□ -0.57
CACNA1C-201ENST00000327702 PGM1P36871 562 aa11.46□□□□□ -0.57
CACNA1C-201ENST00000327702 PHKA2P46019 1235 aa11.46□□□□□ -0.57
CACNA1C-201ENST00000327702 KRT17Q04695 432 aa11.46□□□□□ -0.57
CACNA1C-201ENST00000327702 PDAP1Q13442 181 aaKnown RBP11.46□□□□□ -0.57
CACNA1C-201ENST00000327702 ZNF235Q14590 738 aa11.46□□□□□ -0.57
CACNA1C-201ENST00000327702 UBE2SQ16763 222 aa11.46□□□□□ -0.57
CACNA1C-201ENST00000327702 NLRP14Q86W24 1093 aa11.46□□□□□ -0.57
CACNA1C-201ENST00000327702 RMDN1Q96DB5 314 aa11.46□□□□□ -0.57
CACNA1C-201ENST00000327702 SLC10A4Q96EP9 437 aa11.46□□□□□ -0.57
CACNA1C-201ENST00000327702 SERPINB4P48594 390 aa11.46□□□□□ -0.57
CACNA1C-201ENST00000327702 SNAP25P60880 206 aa11.46□□□□□ -0.57
CACNA1C-201ENST00000327702 HPCAP84074 193 aa11.46□□□□□ -0.57
CACNA1C-201ENST00000327702 ALKBH5Q6P6C2 394 aaKnown RBP11.46□□□□□ -0.57
CACNA1C-201ENST00000327702 COA7Q96BR5 231 aa11.46□□□□□ -0.57
CACNA1C-201ENST00000327702 ARHGEF3Q9NR81 526 aa11.46□□□□□ -0.57
CACNA1C-201ENST00000327702 TTC7AQ9ULT0 858 aaPredicted RBP11.46□□□□□ -0.57
CACNA1C-201ENST00000327702 DTNAQ9Y4J8 743 aa11.46□□□□□ -0.57
CACNA1C-201ENST00000327702 SNX31Q8N9S9 440 aa11.46□□□□□ -0.57
CACNA1C-201ENST00000327702 KANSL2Q9H9L4 492 aa11.46□□□□□ -0.57
CACNA1C-201ENST00000327702 ERVV-2B6SEH9 535 aa11.46□□□□□ -0.58
CACNA1C-201ENST00000327702 APOL1O14791 398 aa11.46□□□□□ -0.58
CACNA1C-201ENST00000327702 PSMD3O43242 534 aa11.46□□□□□ -0.58
CACNA1C-201ENST00000327702 ENO1P06733 434 aaKnown RBP11.46□□□□□ -0.58
CACNA1C-201ENST00000327702 ADCK2Q7Z695 626 aa11.46□□□□□ -0.58
CACNA1C-201ENST00000327702 AGR3Q8TD06 166 aa11.46□□□□□ -0.58
CACNA1C-201ENST00000327702 ASAP3Q8TDY4 903 aa11.46□□□□□ -0.58
CACNA1C-201ENST00000327702 WWP1Q9H0M0 922 aa11.46□□□□□ -0.58
CACNA1C-201ENST00000327702 SAMSN1Q9NSI8 373 aaKnown RBP11.46□□□□□ -0.58
CACNA1C-201ENST00000327702 MAP3K19Q56UN5 1328 aa11.46□□□□□ -0.58
CACNA1C-201ENST00000327702 CHRNA3P32297 505 aa11.46□□□□□ -0.58
CACNA1C-201ENST00000327702 GGCXP38435 758 aa11.46□□□□□ -0.58
CACNA1C-201ENST00000327702 TMED10P49755 219 aaKnown RBP11.46□□□□□ -0.58
CACNA1C-201ENST00000327702 TSC22D1Q15714 1073 aa11.46□□□□□ -0.58
CACNA1C-201ENST00000327702 MDH1BQ5I0G3 518 aa11.46□□□□□ -0.58
CACNA1C-201ENST00000327702 ZBED8Q8IZ13 594 aa11.46□□□□□ -0.58
CACNA1C-201ENST00000327702 OR6P1Q8NGX9 317 aa11.46□□□□□ -0.58
CACNA1C-201ENST00000327702 CMTM5Q96DZ9 223 aa11.46□□□□□ -0.58
CACNA1C-201ENST00000327702 TMEM106CQ9BVX2 250 aa11.46□□□□□ -0.58
CACNA1C-201ENST00000327702 SOX13Q9UN79 622 aa11.46□□□□□ -0.58
CACNA1C-201ENST00000327702 GRID2IPA4D2P6 1211 aa11.45□□□□□ -0.58
CACNA1C-201ENST00000327702 TMEM191CA6NGB0 347 aa11.45□□□□□ -0.58
CACNA1C-201ENST00000327702 LRRIQ3A6PVS8 624 aaPredicted RBP11.45□□□□□ -0.58
CACNA1C-201ENST00000327702 HIST1H2AGP0C0S8 130 aaPredicted RBP11.45□□□□□ -0.58
CACNA1C-201ENST00000327702 HIST1H2ADP20671 130 aa11.45□□□□□ -0.58
CACNA1C-201ENST00000327702 TYK2P29597 1187 aa11.45□□□□□ -0.58
CACNA1C-201ENST00000327702 SDC4P31431 198 aa11.45□□□□□ -0.58
CACNA1C-201ENST00000327702 UBE3CQ15386 1083 aa11.45□□□□□ -0.58
CACNA1C-201ENST00000327702 ZNF394Q53GI3 561 aa11.45□□□□□ -0.58
CACNA1C-201ENST00000327702 ATP11CQ8NB49 1132 aa11.45□□□□□ -0.58
CACNA1C-201ENST00000327702 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.45□□□□□ -0.58
CACNA1C-201ENST00000327702 HIST1H2AHQ96KK5 128 aa11.45□□□□□ -0.58
CACNA1C-201ENST00000327702 HIST1H2AJQ99878 128 aa11.45□□□□□ -0.58
CACNA1C-201ENST00000327702 H2AFJQ9BTM1 129 aa11.45□□□□□ -0.58
CACNA1C-201ENST00000327702 ETNK1Q9HBU6 452 aa11.45□□□□□ -0.58
CACNA1C-201ENST00000327702 PSD3Q9NYI0 1048 aa11.45□□□□□ -0.58
CACNA1C-201ENST00000327702 PNMA3Q9UL41 463 aa11.45□□□□□ -0.58
CACNA1C-201ENST00000327702 FAM135BQ49AJ0 1406 aa11.45□□□□□ -0.58
CACNA1C-201ENST00000327702 ACTN3Q08043 901 aaPredicted RBP11.45□□□□□ -0.58
CACNA1C-201ENST00000327702 ZNF564Q8TBZ8 553 aaPredicted RBP11.45□□□□□ -0.58
CACNA1C-201ENST00000327702 HES6Q96HZ4 224 aa11.45□□□□□ -0.58
CACNA1C-201ENST00000327702 DEPDC7Q96QD5 511 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms