RNA–Protein interactions for RNA: ENST00000327578.9

PCM1-202, Transcript of pericentriolar material 1, humanhuman

TSL 5 BASIC

Gene PCM1, Length 8,287 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-202ENST00000327578 USP17L2Q6R6M4 530 aa14.55□□□□□ -0.08
PCM1-202ENST00000327578 DNAJC9Q8WXX5 260 aa14.55□□□□□ -0.08
PCM1-202ENST00000327578 SIKE1Q9BRV8 207 aa14.55□□□□□ -0.08
PCM1-202ENST00000327578 DBR1Q9UK59 544 aaKnown RBP14.55□□□□□ -0.08
PCM1-202ENST00000327578 CHMP2BQ9UQN3 213 aa14.55□□□□□ -0.08
PCM1-202ENST00000327578 ABCC4O15439 1325 aa14.55□□□□□ -0.08
PCM1-202ENST00000327578 ARHGEF37A1IGU5 675 aa14.55□□□□□ -0.08
PCM1-202ENST00000327578 TRIM49BA6NDI0 452 aa14.55□□□□□ -0.08
PCM1-202ENST00000327578 CDC37Q16543 378 aaPredicted RBP14.55□□□□□ -0.08
PCM1-202ENST00000327578 C17orf80Q9BSJ5 609 aa14.55□□□□□ -0.08
PCM1-202ENST00000327578 SOX13Q9UN79 622 aa14.55□□□□□ -0.08
PCM1-202ENST00000327578 ZMYM3Q14202 1370 aa14.55□□□□□ -0.08
PCM1-202ENST00000327578 UHRF1BP1Q6BDS2 1440 aa14.55□□□□□ -0.08
PCM1-202ENST00000327578 ZNF185O15231 689 aa14.55□□□□□ -0.08
PCM1-202ENST00000327578 HNRNPRO43390 633 aaKnown RBP14.55□□□□□ -0.08
PCM1-202ENST00000327578 CALB1P05937 261 aa14.55□□□□□ -0.08
PCM1-202ENST00000327578 HOXA7P31268 230 aaPredicted RBP14.55□□□□□ -0.08
PCM1-202ENST00000327578 RESTQ13127 1097 aa14.55□□□□□ -0.08
PCM1-202ENST00000327578 ALCAMQ13740 583 aa14.55□□□□□ -0.08
PCM1-202ENST00000327578 SLC27A3Q5K4L6 730 aa14.55□□□□□ -0.08
PCM1-202ENST00000327578 C1orf54Q8WWF1 131 aa14.55□□□□□ -0.08
PCM1-202ENST00000327578 ARHGEF3Q9NR81 526 aa14.55□□□□□ -0.08
PCM1-202ENST00000327578 IP6K2Q9UHH9 426 aa14.55□□□□□ -0.08
PCM1-202ENST00000327578 DNAL1Q4LDG9 190 aa14.55□□□□□ -0.08
PCM1-202ENST00000327578 STAG2Q8N3U4 1231 aa14.55□□□□□ -0.08
PCM1-202ENST00000327578 CCT8L2Q96SF2 557 aa14.55□□□□□ -0.08
PCM1-202ENST00000327578 CCDC134Q9H6E4 229 aa14.55□□□□□ -0.08
PCM1-202ENST00000327578 MPP6Q9NZW5 540 aa14.55□□□□□ -0.08
PCM1-202ENST00000327578 PRCPP42785 496 aa14.55□□□□□ -0.08
PCM1-202ENST00000327578 PDXDC2PQ6P474 469 aa14.55□□□□□ -0.08
PCM1-202ENST00000327578 SFR1Q86XK3 245 aa14.55□□□□□ -0.08
PCM1-202ENST00000327578 SSH3Q8TE77 659 aa14.55□□□□□ -0.08
PCM1-202ENST00000327578 USP15Q9Y4E8 981 aaPredicted RBP14.55□□□□□ -0.08
PCM1-202ENST00000327578 COL17A1Q9UMD9 1497 aaPredicted RBP14.54□□□□□ -0.08
PCM1-202ENST00000327578 PSAPP07602 524 aa14.54□□□□□ -0.08
PCM1-202ENST00000327578 NAA30Q147X3 362 aaPredicted RBP14.54□□□□□ -0.08
PCM1-202ENST00000327578 TRIM71Q2Q1W2 868 aaKnown RBP14.54□□□□□ -0.08
PCM1-202ENST00000327578 TRIM69Q86WT6 500 aa14.54□□□□□ -0.08
PCM1-202ENST00000327578 PIGOQ8TEQ8 1089 aa14.54□□□□□ -0.08
PCM1-202ENST00000327578 PCSK1NQ9UHG2 260 aa14.54□□□□□ -0.08
PCM1-202ENST00000327578 EDC4Q6P2E9 1401 aaKnown RBP14.54□□□□□ -0.08
PCM1-202ENST00000327578 UHRF1BP1LA0JNW5 1464 aa14.54□□□□□ -0.08
PCM1-202ENST00000327578 DENND4BO75064 1496 aaPredicted RBP14.54□□□□□ -0.08
PCM1-202ENST00000327578 FTLP02792 175 aaPredicted RBP14.54□□□□□ -0.08
PCM1-202ENST00000327578 IZUMO3Q5VZ72 239 aa14.54□□□□□ -0.08
PCM1-202ENST00000327578 SMAD5Q99717 465 aaKnown RBP14.54□□□□□ -0.08
PCM1-202ENST00000327578 CLCA2Q9UQC9 943 aa14.54□□□□□ -0.08
PCM1-202ENST00000327578 TARSL2A2RTX5 802 aaKnown RBP14.54□□□□□ -0.08
PCM1-202ENST00000327578 LGALS16A8MUM7 142 aa14.54□□□□□ -0.08
PCM1-202ENST00000327578 TOMM70O94826 608 aa14.54□□□□□ -0.08
PCM1-202ENST00000327578 HMOX2P30519 316 aa14.54□□□□□ -0.08
PCM1-202ENST00000327578 ZNF699Q32M78 642 aa14.54□□□□□ -0.08
PCM1-202ENST00000327578 DCAF4L1Q3SXM0 396 aa14.54□□□□□ -0.08
PCM1-202ENST00000327578 TRPM8Q7Z2W7 1104 aa14.54□□□□□ -0.08
PCM1-202ENST00000327578 DIS3LQ8TF46 1054 aaKnown RBP14.54□□□□□ -0.08
PCM1-202ENST00000327578 USP44Q9H0E7 712 aa14.54□□□□□ -0.08
PCM1-202ENST00000327578 SYBUQ9NX95 663 aa14.54□□□□□ -0.08
PCM1-202ENST00000327578 KIAA0586Q9BVV6 1533 aa14.54□□□□□ -0.08
PCM1-202ENST00000327578 AIM2O14862 343 aa14.54□□□□□ -0.08
PCM1-202ENST00000327578 USP14P54578 494 aa14.54□□□□□ -0.08
PCM1-202ENST00000327578 COBLL1Q53SF7 1204 aa14.54□□□□□ -0.08
PCM1-202ENST00000327578 PKN3Q6P5Z2 889 aa14.54□□□□□ -0.08
PCM1-202ENST00000327578 OR6P1Q8NGX9 317 aa14.54□□□□□ -0.08
PCM1-202ENST00000327578 CMTM5Q96DZ9 223 aa14.54□□□□□ -0.08
PCM1-202ENST00000327578 VPS50Q96JG6 964 aa14.54□□□□□ -0.08
PCM1-202ENST00000327578 SP110Q9HB58 689 aa14.54□□□□□ -0.08
PCM1-202ENST00000327578 ATP10DQ9P241 1426 aa14.54□□□□□ -0.08
PCM1-202ENST00000327578 SPDYE5A6NIY4 337 aa14.54□□□□□ -0.08
PCM1-202ENST00000327578 USP27XA6NNY8 438 aa14.54□□□□□ -0.08
PCM1-202ENST00000327578 TLR2O60603 784 aa14.54□□□□□ -0.08
PCM1-202ENST00000327578 GGPS1O95749 300 aa14.54□□□□□ -0.08
PCM1-202ENST00000327578 ATP1A1P05023 1023 aaKnown RBP14.54□□□□□ -0.08
PCM1-202ENST00000327578 ST13P50502 369 aaKnown RBP14.54□□□□□ -0.08
PCM1-202ENST00000327578 SPDYE7PQ495Y7 208 aa14.54□□□□□ -0.08
PCM1-202ENST00000327578 CCDC149Q6ZUS6 474 aa14.54□□□□□ -0.08
PCM1-202ENST00000327578 PRPF39Q86UA1 669 aaKnown RBP14.54□□□□□ -0.08
PCM1-202ENST00000327578 AGGF1Q8N302 714 aaeCLIP14.54□□□□□ -0.081e-7■■■□□ 16.9
PCM1-202ENST00000327578 PIGSQ96S52 555 aa14.54□□□□□ -0.08
PCM1-202ENST00000327578 TRIM54Q9BYV2 358 aa14.54□□□□□ -0.08
PCM1-202ENST00000327578 GDAQ9Y2T3 454 aa14.54□□□□□ -0.08
PCM1-202ENST00000327578 PRG3Q9Y2Y8 225 aaPredicted RBP14.54□□□□□ -0.08
PCM1-202ENST00000327578 FAM187AA6NFU0 413 aa14.54□□□□□ -0.08
PCM1-202ENST00000327578 MAPRE1Q15691 268 aaKnown RBP14.54□□□□□ -0.08
PCM1-202ENST00000327578 THEM5Q8N1Q8 247 aa14.54□□□□□ -0.08
PCM1-202ENST00000327578 EXOSC4Q9NPD3 245 aaKnown RBP14.54□□□□□ -0.08
PCM1-202ENST00000327578 CHRNDQ07001 517 aa14.53□□□□□ -0.08
PCM1-202ENST00000327578 ZMYM1Q5SVZ6 1142 aa14.53□□□□□ -0.08
PCM1-202ENST00000327578 SLFN12LQ6IEE8 588 aa14.53□□□□□ -0.08
PCM1-202ENST00000327578 TMEM270Q6UE05 265 aa14.53□□□□□ -0.08
PCM1-202ENST00000327578 WDR48Q8TAF3 677 aa14.53□□□□□ -0.08
PCM1-202ENST00000327578 PGBD4Q96DM1 585 aa14.53□□□□□ -0.08
PCM1-202ENST00000327578 TRABDQ9H4I3 376 aa14.53□□□□□ -0.08
PCM1-202ENST00000327578 LCMT1Q9UIC8 334 aa14.53□□□□□ -0.08
PCM1-202ENST00000327578 DFFAO00273 331 aa14.53□□□□□ -0.08
PCM1-202ENST00000327578 EIF3HO15372 352 aaKnown RBP eCLIP14.53□□□□□ -0.081e-6■■■□□ 14.8
PCM1-202ENST00000327578 PODNQ7Z5L7 613 aa14.53□□□□□ -0.08
PCM1-202ENST00000327578 DDHD1Q8NEL9 900 aa14.53□□□□□ -0.08
PCM1-202ENST00000327578 SH3KBP1Q96B97 665 aa14.53□□□□□ -0.08
PCM1-202ENST00000327578 RSPH10B2B2RC85 870 aa14.53□□□□□ -0.08
PCM1-202ENST00000327578 C5orf58C9J3I9 102 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms