RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 ACCSQ96QU6 501 aa21.44■■□□□ 1.02
SOX2-201ENST00000325404 CEP89Q96ST8 783 aa21.44■■□□□ 1.02
SOX2-201ENST00000325404 MXRA8Q9BRK3 442 aa21.44■■□□□ 1.02
SOX2-201ENST00000325404 TRIM51Q9BSJ1 452 aa21.44■■□□□ 1.02
SOX2-201ENST00000325404 CNOT7Q9UIV1 285 aaKnown RBP21.44■■□□□ 1.02
SOX2-201ENST00000325404 FZD9O00144 591 aa21.44■■□□□ 1.02
SOX2-201ENST00000325404 IPO5O00410 1097 aaKnown RBP21.44■■□□□ 1.02
SOX2-201ENST00000325404 KIAA0391O15091 583 aaKnown RBP21.44■■□□□ 1.02
SOX2-201ENST00000325404 RTN2O75298 545 aa21.44■■□□□ 1.02
SOX2-201ENST00000325404 ARP10275 920 aa21.44■■□□□ 1.02
SOX2-201ENST00000325404 CTNNA2P26232 953 aa21.44■■□□□ 1.02
SOX2-201ENST00000325404 CAP2P40123 477 aa21.44■■□□□ 1.02
SOX2-201ENST00000325404 JAMLQ86YT9 394 aa21.44■■□□□ 1.02
SOX2-201ENST00000325404 MICALL2Q8IY33 904 aa21.44■■□□□ 1.02
SOX2-201ENST00000325404 ALG3Q92685 438 aa21.44■■□□□ 1.02
SOX2-201ENST00000325404 P3H4Q92791 437 aa21.44■■□□□ 1.02
SOX2-201ENST00000325404 UPF1Q92900 1129 aaKnown RBP eCLIP21.44■■□□□ 1.02
SOX2-201ENST00000325404 HOOK2Q96ED9 719 aa21.44■■□□□ 1.02
SOX2-201ENST00000325404 TIPINQ9BVW5 301 aa21.44■■□□□ 1.02
SOX2-201ENST00000325404 PPANQ9NQ55 473 aaKnown RBP21.44■■□□□ 1.02
SOX2-201ENST00000325404 GJA3Q9Y6H8 435 aa21.44■■□□□ 1.02
SOX2-201ENST00000325404 EGFRP00533 1210 aa21.43■■□□□ 1.02
SOX2-201ENST00000325404 VAMP7P51809 220 aa21.43■■□□□ 1.02
SOX2-201ENST00000325404 MAP3K10Q02779 954 aa21.43■■□□□ 1.02
SOX2-201ENST00000325404 PRPF4BQ13523 1007 aaKnown RBP21.43■■□□□ 1.02
SOX2-201ENST00000325404 SWT1Q5T5J6 900 aaKnown RBP21.43■■□□□ 1.02
SOX2-201ENST00000325404 PADI6Q6TGC4 694 aa21.43■■□□□ 1.02
SOX2-201ENST00000325404 ACTR5Q9H9F9 607 aaPredicted RBP21.43■■□□□ 1.02
SOX2-201ENST00000325404 CAPN7Q9Y6W3 813 aa21.43■■□□□ 1.02
SOX2-201ENST00000325404 ZNF536O15090 1300 aa21.43■■□□□ 1.02
SOX2-201ENST00000325404 FTLP02792 175 aaPredicted RBP21.43■■□□□ 1.02
SOX2-201ENST00000325404 PTGIRP43119 386 aa21.43■■□□□ 1.02
SOX2-201ENST00000325404 MAGOHP61326 146 aaKnown RBP21.43■■□□□ 1.02
SOX2-201ENST00000325404 ACTN3Q08043 901 aaPredicted RBP21.43■■□□□ 1.02
SOX2-201ENST00000325404 IFFO1Q0D2I5 559 aa21.43■■□□□ 1.02
SOX2-201ENST00000325404 PALB2Q86YC2 1186 aa21.43■■□□□ 1.02
SOX2-201ENST00000325404 NLGN2Q8NFZ4 835 aa21.43■■□□□ 1.02
SOX2-201ENST00000325404 MAGOHBQ96A72 148 aaKnown RBP21.43■■□□□ 1.02
SOX2-201ENST00000325404 ZSWIM1Q9BR11 485 aa21.43■■□□□ 1.02
SOX2-201ENST00000325404 TMEM109Q9BVC6 243 aa21.43■■□□□ 1.02
SOX2-201ENST00000325404 WNT8AQ9H1J5 351 aa21.43■■□□□ 1.02
SOX2-201ENST00000325404 UBE2TQ9NPD8 197 aaPredicted RBP21.43■■□□□ 1.02
SOX2-201ENST00000325404 BCCIPQ9P287 314 aaKnown RBP eCLIP21.43■■□□□ 1.02
SOX2-201ENST00000325404 CNOT8Q9UFF9 292 aaKnown RBP21.43■■□□□ 1.02
SOX2-201ENST00000325404 EMSYQ7Z589 1322 aa21.42■■□□□ 1.02
SOX2-201ENST00000325404 LYPLA2O95372 231 aa21.42■■□□□ 1.02
SOX2-201ENST00000325404 P4HBP07237 508 aaKnown RBP21.42■■□□□ 1.02
SOX2-201ENST00000325404 HNRNPH1P31943 449 aaKnown RBP21.42■■□□□ 1.02
SOX2-201ENST00000325404 EPB41L4BQ9H329 900 aa21.42■■□□□ 1.02
SOX2-201ENST00000325404 VCPKMTQ9H867 229 aa21.42■■□□□ 1.02
SOX2-201ENST00000325404 ERVK-5Q9HDB9 667 aa21.42■■□□□ 1.02
SOX2-201ENST00000325404 ATP8A1Q9Y2Q0 1164 aa21.42■■□□□ 1.02
SOX2-201ENST00000325404 CCDC169A6NNP5 214 aa21.42■■□□□ 1.02
SOX2-201ENST00000325404 VGLL3A8MV65 326 aa21.42■■□□□ 1.02
SOX2-201ENST00000325404 K7ENM7 598 aa21.42■■□□□ 1.02
SOX2-201ENST00000325404 PMS2P54278 862 aa21.42■■□□□ 1.02
SOX2-201ENST00000325404 CYP1B1Q16678 543 aa21.42■■□□□ 1.02
SOX2-201ENST00000325404 SLC30A10Q6XR72 485 aa21.42■■□□□ 1.02
SOX2-201ENST00000325404 SLC17A8Q8NDX2 589 aa21.42■■□□□ 1.02
SOX2-201ENST00000325404 RAPGEF5Q92565 580 aa21.42■■□□□ 1.02
SOX2-201ENST00000325404 IWS1Q96ST2 819 aa21.42■■□□□ 1.02
SOX2-201ENST00000325404 SEPT11Q9NVA2 429 aaKnown RBP21.42■■□□□ 1.02
SOX2-201ENST00000325404 CTTNBP2NLQ9P2B4 639 aa21.42■■□□□ 1.02
SOX2-201ENST00000325404 ASNSP08243 561 aa21.41■■□□□ 1.02
SOX2-201ENST00000325404 ALAS1P13196 640 aa21.41■■□□□ 1.02
SOX2-201ENST00000325404 PEX5P50542 639 aa21.41■■□□□ 1.02
SOX2-201ENST00000325404 HSD17B4P51659 736 aa21.41■■□□□ 1.02
SOX2-201ENST00000325404 ZDHHC24Q6UX98 284 aa21.41■■□□□ 1.02
SOX2-201ENST00000325404 TAX1BP1Q86VP1 789 aa21.41■■□□□ 1.02
SOX2-201ENST00000325404 DDX20Q9UHI6 824 aaKnown RBP21.41■■□□□ 1.02
SOX2-201ENST00000325404 FEM1BQ9UK73 627 aa21.41■■□□□ 1.02
SOX2-201ENST00000325404 CCDC174Q6PII3 467 aa21.4■■□□□ 1.02
SOX2-201ENST00000325404 XXYLT1Q8NBI6 393 aa21.4■■□□□ 1.02
SOX2-201ENST00000325404 BANK1Q8NDB2 785 aa21.4■■□□□ 1.02
SOX2-201ENST00000325404 SCAF8Q9UPN6 1271 aaKnown RBP21.4■■□□□ 1.02
SOX2-201ENST00000325404 RPTORQ8N122 1335 aa21.4■■□□□ 1.02
SOX2-201ENST00000325404 PLS3P13797 630 aa21.4■■□□□ 1.02
SOX2-201ENST00000325404 GTF2BQ00403 316 aa21.4■■□□□ 1.02
SOX2-201ENST00000325404 IFT88Q13099 833 aa21.4■■□□□ 1.02
SOX2-201ENST00000325404 SAMD7Q7Z3H4 446 aa21.4■■□□□ 1.02
SOX2-201ENST00000325404 FAM71AQ8IYT1 594 aa21.4■■□□□ 1.02
SOX2-201ENST00000325404 PRELID2Q8N945 189 aa21.4■■□□□ 1.02
SOX2-201ENST00000325404 SLC20A1Q8WUM9 679 aa21.4■■□□□ 1.02
SOX2-201ENST00000325404 TATDN2Q93075 761 aa21.4■■□□□ 1.02
SOX2-201ENST00000325404 MYH11P35749 1972 aa21.4■■□□□ 1.02
SOX2-201ENST00000325404 LRRN2O75325 713 aa21.39■■□□□ 1.02
SOX2-201ENST00000325404 SMTNP53814 917 aa21.39■■□□□ 1.02
SOX2-201ENST00000325404 PPP3CAQ08209 521 aa21.39■■□□□ 1.02
SOX2-201ENST00000325404 C1orf220Q5T0J3 134 aa21.39■■□□□ 1.02
SOX2-201ENST00000325404 ERMARDQ5T6L9 678 aa21.39■■□□□ 1.02
SOX2-201ENST00000325404 MIER3Q7Z3K6 550 aa21.39■■□□□ 1.02
SOX2-201ENST00000325404 CD101Q93033 1021 aa21.39■■□□□ 1.02
SOX2-201ENST00000325404 CABS1Q96KC9 395 aa21.39■■□□□ 1.02
SOX2-201ENST00000325404 GRHL1Q9NZI5 618 aa21.39■■□□□ 1.02
SOX2-201ENST00000325404 SMCHD1A6NHR9 2005 aa21.39■■□□□ 1.01
SOX2-201ENST00000325404 TMOD1P28289 359 aa21.39■■□□□ 1.01
SOX2-201ENST00000325404 GHRHRQ02643 423 aa21.39■■□□□ 1.01
SOX2-201ENST00000325404 TBC1D10BQ4KMP7 808 aaPredicted RBP21.39■■□□□ 1.01
SOX2-201ENST00000325404 DENND2CQ68D51 928 aa21.39■■□□□ 1.01
SOX2-201ENST00000325404 CCDC121Q6ZUS5 278 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms