RNA–Protein interactions for RNA: ENST00000325167.9

CHMP6-201, Transcript of charged multivesicular body protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP6, Length 1,664 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-201ENST00000325167 HDAC6Q9UBN7 1215 aa20.91■□□□□ 0.94
CHMP6-201ENST00000325167 DDX41Q9UJV9 622 aaKnown RBP20.91■□□□□ 0.94
CHMP6-201ENST00000325167 COQ4Q9Y3A0 265 aa20.91■□□□□ 0.94
CHMP6-201ENST00000325167 LGR5O75473 907 aa20.9■□□□□ 0.94
CHMP6-201ENST00000325167 CETPP11597 493 aa20.9■□□□□ 0.94
CHMP6-201ENST00000325167 GCLMP48507 274 aa20.9■□□□□ 0.94
CHMP6-201ENST00000325167 C1orf220Q5T0J3 134 aa20.9■□□□□ 0.94
CHMP6-201ENST00000325167 GJB7Q6PEY0 223 aa20.9■□□□□ 0.94
CHMP6-201ENST00000325167 PLPPR4Q7Z2D5 763 aa20.9■□□□□ 0.94
CHMP6-201ENST00000325167 PARD3BQ8TEW8 1205 aa20.9■□□□□ 0.94
CHMP6-201ENST00000325167 TCP11Q8WWU5 503 aa20.9■□□□□ 0.94
CHMP6-201ENST00000325167 BBXQ8WY36 941 aaPredicted RBP20.9■□□□□ 0.94
CHMP6-201ENST00000325167 TMEM117Q9H0C3 514 aa20.9■□□□□ 0.94
CHMP6-201ENST00000325167 TXNRD2Q9NNW7 524 aa20.9■□□□□ 0.94
CHMP6-201ENST00000325167 AJAP1Q9UKB5 411 aaPredicted RBP20.9■□□□□ 0.94
CHMP6-201ENST00000325167 RAB21Q9UL25 225 aa20.9■□□□□ 0.94
CHMP6-201ENST00000325167 STYXL1Q9Y6J8 313 aa20.9■□□□□ 0.94
CHMP6-201ENST00000325167 LRRC37A2A6NM11 1700 aa20.9■□□□□ 0.94
CHMP6-201ENST00000325167 ZNF233A6NK53 670 aa20.89■□□□□ 0.94
CHMP6-201ENST00000325167 NOP56O00567 594 aaKnown RBP20.89■□□□□ 0.94
CHMP6-201ENST00000325167 EXTL3O43909 919 aa20.89■□□□□ 0.94
CHMP6-201ENST00000325167 LDHAP00338 332 aaKnown RBP20.89■□□□□ 0.94
CHMP6-201ENST00000325167 ADRB2P07550 413 aa20.89■□□□□ 0.94
CHMP6-201ENST00000325167 KLRC1P26715 233 aa20.89■□□□□ 0.94
CHMP6-201ENST00000325167 TCF7P36402 384 aaPredicted RBP20.89■□□□□ 0.94
CHMP6-201ENST00000325167 DLG4P78352 724 aa20.89■□□□□ 0.94
CHMP6-201ENST00000325167 CYP24A1Q07973 514 aa20.89■□□□□ 0.94
CHMP6-201ENST00000325167 CELF3Q5SZQ8 465 aaKnown RBP20.89■□□□□ 0.94
CHMP6-201ENST00000325167 PHLDB3Q6NSJ2 640 aa20.89■□□□□ 0.94
CHMP6-201ENST00000325167 CBWD2Q8IUF1 395 aa20.89■□□□□ 0.94
CHMP6-201ENST00000325167 GPIHBP1Q8IV16 184 aa20.89■□□□□ 0.94
CHMP6-201ENST00000325167 ARFGAP3Q9NP61 516 aa20.89■□□□□ 0.94
CHMP6-201ENST00000325167 WBP1LQ9NX94 342 aa20.89■□□□□ 0.94
CHMP6-201ENST00000325167 ADGRA3Q8IWK6 1321 aa20.89■□□□□ 0.93
CHMP6-201ENST00000325167 AOC2O75106 756 aa20.89■□□□□ 0.93
CHMP6-201ENST00000325167 ZC3H11AO75152 810 aaKnown RBP eCLIP20.89■□□□□ 0.93
CHMP6-201ENST00000325167 MAFO75444 373 aaPredicted RBP20.89■□□□□ 0.93
CHMP6-201ENST00000325167 PAFAH1B1P43034 410 aa20.89■□□□□ 0.93
CHMP6-201ENST00000325167 GPC3P51654 580 aa20.89■□□□□ 0.93
CHMP6-201ENST00000325167 GTF2A2P52657 109 aa20.89■□□□□ 0.93
CHMP6-201ENST00000325167 MFAP3P55082 362 aa20.89■□□□□ 0.93
CHMP6-201ENST00000325167 ENOSF1Q7L5Y1 443 aa20.89■□□□□ 0.93
CHMP6-201ENST00000325167 UBE2Q2Q8WVN8 375 aa20.89■□□□□ 0.93
CHMP6-201ENST00000325167 HNRNPLLQ8WVV9 542 aaKnown RBP20.89■□□□□ 0.93
CHMP6-201ENST00000325167 CEP89Q96ST8 783 aa20.89■□□□□ 0.93
CHMP6-201ENST00000325167 OSBPL9Q96SU4 736 aa20.89■□□□□ 0.93
CHMP6-201ENST00000325167 PCYT2Q99447 389 aa20.89■□□□□ 0.93
CHMP6-201ENST00000325167 UBE2TQ9NPD8 197 aaPredicted RBP20.89■□□□□ 0.93
CHMP6-201ENST00000325167 TELO2Q9Y4R8 837 aa20.89■□□□□ 0.93
CHMP6-201ENST00000325167 THSD7BQ9C0I4 1608 aa20.89■□□□□ 0.93
CHMP6-201ENST00000325167 DOCK5Q9H7D0 1870 aa20.88■□□□□ 0.93
CHMP6-201ENST00000325167 TARSL2A2RTX5 802 aaKnown RBP20.88■□□□□ 0.93
CHMP6-201ENST00000325167 K7ERI5 159 aa20.88■□□□□ 0.93
CHMP6-201ENST00000325167 DDX3XO00571 662 aaKnown RBP eCLIP20.88■□□□□ 0.93
CHMP6-201ENST00000325167 BUB1O43683 1085 aa20.88■□□□□ 0.93
CHMP6-201ENST00000325167 SORBS3O60504 671 aa20.88■□□□□ 0.93
CHMP6-201ENST00000325167 PEX10O60683 326 aa20.88■□□□□ 0.93
CHMP6-201ENST00000325167 ZSCAN20P17040 1043 aaPredicted RBP20.88■□□□□ 0.93
CHMP6-201ENST00000325167 TNFAIP3P21580 790 aa20.88■□□□□ 0.93
CHMP6-201ENST00000325167 GLRA2P23416 452 aa20.88■□□□□ 0.93
CHMP6-201ENST00000325167 GCLCP48506 637 aaPredicted RBP20.88■□□□□ 0.93
CHMP6-201ENST00000325167 EFNA5P52803 228 aa20.88■□□□□ 0.93
CHMP6-201ENST00000325167 Q3C1V9 767 aa20.88■□□□□ 0.93
CHMP6-201ENST00000325167 IER5Q5VY09 327 aa20.88■□□□□ 0.93
CHMP6-201ENST00000325167 SLC39A4Q6P5W5 647 aa20.88■□□□□ 0.93
CHMP6-201ENST00000325167 SYCE1Q8N0S2 351 aa20.88■□□□□ 0.93
CHMP6-201ENST00000325167 ANKRD13CQ8N6S4 541 aa20.88■□□□□ 0.93
CHMP6-201ENST00000325167 GPRC5AQ8NFJ5 357 aa20.88■□□□□ 0.93
CHMP6-201ENST00000325167 SLC30A5Q8TAD4 765 aa20.88■□□□□ 0.93
CHMP6-201ENST00000325167 RUBCNQ92622 972 aa20.88■□□□□ 0.93
CHMP6-201ENST00000325167 FGD4Q96M96 766 aa20.88■□□□□ 0.93
CHMP6-201ENST00000325167 GPR88Q9GZN0 384 aa20.88■□□□□ 0.93
CHMP6-201ENST00000325167 SALL4Q9UJQ4 1053 aa20.88■□□□□ 0.93
CHMP6-201ENST00000325167 GOLGA8IPA6NC78 632 aa20.87■□□□□ 0.93
CHMP6-201ENST00000325167 GOLGA8JA6NMD2 632 aa20.87■□□□□ 0.93
CHMP6-201ENST00000325167 CES2O00748 559 aa20.87■□□□□ 0.93
CHMP6-201ENST00000325167 TTLL4Q14679 1199 aa20.87■□□□□ 0.93
CHMP6-201ENST00000325167 CCDC181Q5TID7 509 aa20.87■□□□□ 0.93
CHMP6-201ENST00000325167 ABRAQ8N0Z2 381 aa20.87■□□□□ 0.93
CHMP6-201ENST00000325167 FBXL13Q8NEE6 735 aa20.87■□□□□ 0.93
CHMP6-201ENST00000325167 PLEKHO2Q8TD55 490 aa20.87■□□□□ 0.93
CHMP6-201ENST00000325167 SAAL1Q96ER3 474 aa20.87■□□□□ 0.93
CHMP6-201ENST00000325167 GPR20Q99678 358 aa20.87■□□□□ 0.93
CHMP6-201ENST00000325167 SYT11Q9BT88 431 aa20.87■□□□□ 0.93
CHMP6-201ENST00000325167 LRRIQ4A6NIV6 560 aa20.86■□□□□ 0.93
CHMP6-201ENST00000325167 LRRIQ3A6PVS8 624 aaPredicted RBP20.86■□□□□ 0.93
CHMP6-201ENST00000325167 PALMO75781 387 aa20.86■□□□□ 0.93
CHMP6-201ENST00000325167 SOX10P56693 466 aa20.86■□□□□ 0.93
CHMP6-201ENST00000325167 HUNKP57058 714 aa20.86■□□□□ 0.93
CHMP6-201ENST00000325167 MXD4Q14582 209 aaPredicted RBP20.86■□□□□ 0.93
CHMP6-201ENST00000325167 ARHGAP44Q17R89 818 aa20.86■□□□□ 0.93
CHMP6-201ENST00000325167 TAS1R3Q7RTX0 852 aa20.86■□□□□ 0.93
CHMP6-201ENST00000325167 DHX37Q8IY37 1157 aaKnown RBP20.86■□□□□ 0.93
CHMP6-201ENST00000325167 TNS4Q8IZW8 715 aa20.86■□□□□ 0.93
CHMP6-201ENST00000325167 ATP8B4Q8TF62 1192 aa20.86■□□□□ 0.93
CHMP6-201ENST00000325167 U2AF1L4Q8WU68 220 aaKnown RBP20.86■□□□□ 0.93
CHMP6-201ENST00000325167 SCFD2Q8WU76 684 aa20.86■□□□□ 0.93
CHMP6-201ENST00000325167 GLG1Q92896 1179 aa20.86■□□□□ 0.93
CHMP6-201ENST00000325167 TMEM143Q96AN5 459 aa20.86■□□□□ 0.93
CHMP6-201ENST00000325167 NT5C1BQ96P26 610 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms