RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 MRPL4Q9BYD3 311 aaKnown RBP16.7■□□□□ 0.26
PRPF3-201ENST00000324862 CELF4Q9BZC1 486 aaKnown RBP16.7■□□□□ 0.26
PRPF3-201ENST00000324862 PRDM10Q9NQV6 1147 aa16.7■□□□□ 0.26
PRPF3-201ENST00000324862 KCNG1Q9UIX4 513 aa16.7■□□□□ 0.26
PRPF3-201ENST00000324862 NOC2LQ9Y3T9 749 aaKnown RBP16.7■□□□□ 0.26
PRPF3-201ENST00000324862 ABLIM1O14639 778 aa16.7■□□□□ 0.26
PRPF3-201ENST00000324862 ADRB2P07550 413 aa16.7■□□□□ 0.26
PRPF3-201ENST00000324862 POU5F1BQ06416 359 aa16.7■□□□□ 0.26
PRPF3-201ENST00000324862 CCDC40Q4G0X9 1142 aa16.7■□□□□ 0.26
PRPF3-201ENST00000324862 ZNF618Q5T7W0 954 aa16.7■□□□□ 0.26
PRPF3-201ENST00000324862 FAM126BQ8IXS8 530 aa16.7■□□□□ 0.26
PRPF3-201ENST00000324862 FAM213AQ9BRX8 229 aa16.7■□□□□ 0.26
PRPF3-201ENST00000324862 GCOM2Q9BZD3 368 aaPredicted RBP16.7■□□□□ 0.26
PRPF3-201ENST00000324862 PRKCSHP14314 528 aaPredicted RBP16.69■□□□□ 0.26
PRPF3-201ENST00000324862 WNT7BP56706 349 aa16.69■□□□□ 0.26
PRPF3-201ENST00000324862 UBASH3AP57075 661 aa16.69■□□□□ 0.26
PRPF3-201ENST00000324862 OSTNP61366 133 aa16.69■□□□□ 0.26
PRPF3-201ENST00000324862 ATF7IP2Q5U623 682 aa16.69■□□□□ 0.26
PRPF3-201ENST00000324862 FILIP1Q7Z7B0 1213 aa16.69■□□□□ 0.26
PRPF3-201ENST00000324862 KCNN1Q92952 543 aa16.69■□□□□ 0.26
PRPF3-201ENST00000324862 TUBGCP2Q9BSJ2 902 aa16.69■□□□□ 0.26
PRPF3-201ENST00000324862 PRMT7Q9NVM4 692 aaPredicted RBP16.69■□□□□ 0.26
PRPF3-201ENST00000324862 PES1O00541 588 aaKnown RBP16.69■□□□□ 0.26
PRPF3-201ENST00000324862 PIGRP01833 764 aa16.69■□□□□ 0.26
PRPF3-201ENST00000324862 RPL13P26373 211 aaKnown RBP16.69■□□□□ 0.26
PRPF3-201ENST00000324862 HOXA11P31270 313 aaPredicted RBP16.69■□□□□ 0.26
PRPF3-201ENST00000324862 TNFSF9P41273 254 aa16.69■□□□□ 0.26
PRPF3-201ENST00000324862 MTIF2P46199 727 aaKnown RBP16.69■□□□□ 0.26
PRPF3-201ENST00000324862 DLG4P78352 724 aa16.69■□□□□ 0.26
PRPF3-201ENST00000324862 MGAT3Q09327 533 aa16.69■□□□□ 0.26
PRPF3-201ENST00000324862 SLC39A5Q6ZMH5 540 aa16.69■□□□□ 0.26
PRPF3-201ENST00000324862 CATSPER4Q7RTX7 472 aa16.69■□□□□ 0.26
PRPF3-201ENST00000324862 TMEM192Q8IY95 271 aa16.69■□□□□ 0.26
PRPF3-201ENST00000324862 NME8Q8N427 588 aa16.69■□□□□ 0.26
PRPF3-201ENST00000324862 PLEKHO2Q8TD55 490 aa16.69■□□□□ 0.26
PRPF3-201ENST00000324862 CEP63Q96MT8 703 aa16.69■□□□□ 0.26
PRPF3-201ENST00000324862 AGO3Q9H9G7 860 aaKnown RBP16.69■□□□□ 0.26
PRPF3-201ENST00000324862 MAGEC2Q9UBF1 373 aaPredicted RBP16.69■□□□□ 0.26
PRPF3-201ENST00000324862 UMODL1Q5DID0 1318 aa16.69■□□□□ 0.26
PRPF3-201ENST00000324862 ERLIN2O94905 339 aa16.68■□□□□ 0.26
PRPF3-201ENST00000324862 COL6A1P12109 1028 aa16.68■□□□□ 0.26
PRPF3-201ENST00000324862 EN2P19622 333 aaPredicted RBP16.68■□□□□ 0.26
PRPF3-201ENST00000324862 ZNF75DP51815 510 aa16.68■□□□□ 0.26
PRPF3-201ENST00000324862 COPB1P53618 953 aaKnown RBP16.68■□□□□ 0.26
PRPF3-201ENST00000324862 CRYBB1P53674 252 aaPredicted RBP16.68■□□□□ 0.26
PRPF3-201ENST00000324862 PTK7Q13308 1070 aa16.68■□□□□ 0.26
PRPF3-201ENST00000324862 TRIM60Q495X7 471 aa16.68■□□□□ 0.26
PRPF3-201ENST00000324862 MIIPQ5JXC2 388 aa16.68■□□□□ 0.26
PRPF3-201ENST00000324862 FOXR2Q6PJQ5 311 aa16.68■□□□□ 0.26
PRPF3-201ENST00000324862 SARM1Q6SZW1 724 aa16.68■□□□□ 0.26
PRPF3-201ENST00000324862 SRGAP1Q7Z6B7 1085 aa16.68■□□□□ 0.26
PRPF3-201ENST00000324862 FAM228AQ86W67 206 aa16.68■□□□□ 0.26
PRPF3-201ENST00000324862 FAM186BQ8IYM0 893 aa16.68■□□□□ 0.26
PRPF3-201ENST00000324862 XXYLT1Q8NBI6 393 aa16.68■□□□□ 0.26
PRPF3-201ENST00000324862 PDZD7Q9H5P4 517 aa16.68■□□□□ 0.26
PRPF3-201ENST00000324862 PTPRHQ9HD43 1115 aa16.68■□□□□ 0.26
PRPF3-201ENST00000324862 LIMA1Q9UHB6 759 aaKnown RBP16.68■□□□□ 0.26
PRPF3-201ENST00000324862 TRPV2Q9Y5S1 764 aa16.68■□□□□ 0.26
PRPF3-201ENST00000324862 A0A0B4J269 797 aa16.68■□□□□ 0.26
PRPF3-201ENST00000324862 CLDN3O15551 220 aa16.68■□□□□ 0.26
PRPF3-201ENST00000324862 TOM1L1O75674 476 aa16.68■□□□□ 0.26
PRPF3-201ENST00000324862 TRIM49P0CI25 452 aa16.68■□□□□ 0.26
PRPF3-201ENST00000324862 TRIM49CP0CI26 452 aa16.68■□□□□ 0.26
PRPF3-201ENST00000324862 GHRP10912 638 aa16.68■□□□□ 0.26
PRPF3-201ENST00000324862 CKBP12277 381 aa16.68■□□□□ 0.26
PRPF3-201ENST00000324862 PTPN11Q06124 597 aaPredicted RBP16.68■□□□□ 0.26
PRPF3-201ENST00000324862 DCAF17Q5H9S7 520 aaPredicted RBP16.68■□□□□ 0.26
PRPF3-201ENST00000324862 CRELD2Q6UXH1 353 aaPredicted RBP16.68■□□□□ 0.26
PRPF3-201ENST00000324862 TSHZ1Q6ZSZ6 1077 aa16.68■□□□□ 0.26
PRPF3-201ENST00000324862 GOLGA5Q8TBA6 731 aa16.68■□□□□ 0.26
PRPF3-201ENST00000324862 BORCS6Q96GS4 357 aa16.68■□□□□ 0.26
PRPF3-201ENST00000324862 MSTO1Q9BUK6 570 aa16.68■□□□□ 0.26
PRPF3-201ENST00000324862 MMRN2Q9H8L6 949 aa16.68■□□□□ 0.26
PRPF3-201ENST00000324862 AGO2Q9UKV8 859 aaKnown RBP16.68■□□□□ 0.26
PRPF3-201ENST00000324862 STYXL1Q9Y6J8 313 aa16.68■□□□□ 0.26
PRPF3-201ENST00000324862 SIP14410 1827 aa16.68■□□□□ 0.26
PRPF3-201ENST00000324862 CNTNAP2Q9UHC6 1331 aa16.68■□□□□ 0.26
PRPF3-201ENST00000324862 EEF1GP26641 437 aaKnown RBP16.67■□□□□ 0.26
PRPF3-201ENST00000324862 NFX1Q12986 1120 aaKnown RBP16.67■□□□□ 0.26
PRPF3-201ENST00000324862 MBTPS1Q14703 1052 aa16.67■□□□□ 0.26
PRPF3-201ENST00000324862 SNRNP35Q16560 246 aaKnown RBP16.67■□□□□ 0.26
PRPF3-201ENST00000324862 NFIL3Q16649 462 aa16.67■□□□□ 0.26
PRPF3-201ENST00000324862 ZNF568Q3ZCX4 644 aa16.67■□□□□ 0.26
PRPF3-201ENST00000324862 TRAF7Q6Q0C0 670 aa16.67■□□□□ 0.26
PRPF3-201ENST00000324862 ZPBP2Q6X784 338 aa16.67■□□□□ 0.26
PRPF3-201ENST00000324862 RSPH3Q86UC2 560 aa16.67■□□□□ 0.26
PRPF3-201ENST00000324862 SLC9A9Q8IVB4 645 aa16.67■□□□□ 0.26
PRPF3-201ENST00000324862 C12orf56Q8IXR9 622 aa16.67■□□□□ 0.26
PRPF3-201ENST00000324862 THNSL1Q8IYQ7 743 aa16.67■□□□□ 0.26
PRPF3-201ENST00000324862 POP1Q99575 1024 aaKnown RBP16.67■□□□□ 0.26
PRPF3-201ENST00000324862 NOC4LQ9BVI4 516 aaKnown RBP16.67■□□□□ 0.26
PRPF3-201ENST00000324862 TMEM106CQ9BVX2 250 aa16.67■□□□□ 0.26
PRPF3-201ENST00000324862 N4BP3O15049 544 aa16.67■□□□□ 0.26
PRPF3-201ENST00000324862 FAM189A1O60320 539 aa16.67■□□□□ 0.26
PRPF3-201ENST00000324862 PROZP22891 400 aa16.67■□□□□ 0.26
PRPF3-201ENST00000324862 PSMC2P35998 433 aaKnown RBP16.67■□□□□ 0.26
PRPF3-201ENST00000324862 FAM187BQ17R55 369 aa16.67■□□□□ 0.26
PRPF3-201ENST00000324862 SPC24Q8NBT2 197 aa16.67■□□□□ 0.26
PRPF3-201ENST00000324862 EIF2AQ9BY44 585 aaKnown RBP16.67■□□□□ 0.26
PRPF3-201ENST00000324862 CDT1Q9H211 546 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms