RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-223ENST00000324771 STX2P32856 288 aa12.68□□□□□ -0.38
DDR1-223ENST00000324771 YWHAEP62258 255 aaKnown RBP12.68□□□□□ -0.38
DDR1-223ENST00000324771 GABPAQ06546 454 aa12.68□□□□□ -0.38
DDR1-223ENST00000324771 ZRSR2Q15696 482 aaKnown RBP12.68□□□□□ -0.38
DDR1-223ENST00000324771 RHOT2Q8IXI1 618 aa12.68□□□□□ -0.38
DDR1-223ENST00000324771 FBF1Q8TES7 1133 aa12.68□□□□□ -0.38
DDR1-223ENST00000324771 SLC16A10Q8TF71 515 aa12.68□□□□□ -0.38
DDR1-223ENST00000324771 RNPC3Q96LT9 517 aaKnown RBP12.68□□□□□ -0.38
DDR1-223ENST00000324771 STK33Q9BYT3 514 aa12.68□□□□□ -0.38
DDR1-223ENST00000324771 NAGPAQ9UK23 515 aa12.68□□□□□ -0.38
DDR1-223ENST00000324771 SSU72P8A0A1W2PR75 194 aa12.67□□□□□ -0.38
DDR1-223ENST00000324771 SAT1P21673 171 aa12.67□□□□□ -0.38
DDR1-223ENST00000324771 SCP2P22307 547 aa12.67□□□□□ -0.38
DDR1-223ENST00000324771 TBX2Q13207 712 aaPredicted RBP12.67□□□□□ -0.38
DDR1-223ENST00000324771 C15orf52Q6ZUT6 534 aaKnown RBP12.67□□□□□ -0.38
DDR1-223ENST00000324771 ZNF720Q7Z2F6 126 aa12.67□□□□□ -0.38
DDR1-223ENST00000324771 GIMAP7Q8NHV1 300 aa12.67□□□□□ -0.38
DDR1-223ENST00000324771 SEPT1Q8WYJ6 367 aa12.67□□□□□ -0.38
DDR1-223ENST00000324771 RFFLQ8WZ73 363 aa12.67□□□□□ -0.38
DDR1-223ENST00000324771 DNAJC7Q99615 494 aa12.67□□□□□ -0.38
DDR1-223ENST00000324771 WDR18Q9BV38 432 aa12.67□□□□□ -0.38
DDR1-223ENST00000324771 RNF19AQ9NV58 838 aa12.67□□□□□ -0.38
DDR1-223ENST00000324771 MYL3P08590 195 aa12.67□□□□□ -0.38
DDR1-223ENST00000324771 NPTX2P47972 431 aa12.67□□□□□ -0.38
DDR1-223ENST00000324771 YWHAGP61981 247 aaKnown RBP eCLIP12.67□□□□□ -0.38
DDR1-223ENST00000324771 TTLL4Q14679 1199 aa12.67□□□□□ -0.38
DDR1-223ENST00000324771 HHATQ5VTY9 493 aa12.67□□□□□ -0.38
DDR1-223ENST00000324771 IRF2BP1Q8IU81 584 aa12.67□□□□□ -0.38
DDR1-223ENST00000324771 CCDC13Q8IYE1 715 aa12.67□□□□□ -0.38
DDR1-223ENST00000324771 ACSF2Q96CM8 615 aaPredicted RBP12.67□□□□□ -0.38
DDR1-223ENST00000324771 JPH2Q9BR39 696 aaPredicted RBP12.67□□□□□ -0.38
DDR1-223ENST00000324771 MIS12Q9H081 205 aa12.67□□□□□ -0.38
DDR1-223ENST00000324771 THAP2Q9H0W7 228 aa12.67□□□□□ -0.38
DDR1-223ENST00000324771 SUCLA2Q9P2R7 463 aaPredicted RBP12.67□□□□□ -0.38
DDR1-223ENST00000324771 ANAPC5Q9UJX4 755 aa12.67□□□□□ -0.38
DDR1-223ENST00000324771 INPP5FQ9Y2H2 1132 aa12.67□□□□□ -0.38
DDR1-223ENST00000324771 ZSCAN5CA6NGD5 496 aaPredicted RBP12.67□□□□□ -0.38
DDR1-223ENST00000324771 PSMA2P25787 234 aa12.67□□□□□ -0.38
DDR1-223ENST00000324771 BBS9Q3SYG4 887 aa12.67□□□□□ -0.38
DDR1-223ENST00000324771 SPOPLQ6IQ16 392 aa12.67□□□□□ -0.38
DDR1-223ENST00000324771 ZNF571Q7Z3V5 609 aaPredicted RBP12.67□□□□□ -0.38
DDR1-223ENST00000324771 MED15Q96RN5 788 aa12.67□□□□□ -0.38
DDR1-223ENST00000324771 TOPAZ1Q8N9V7 1692 aa12.67□□□□□ -0.38
DDR1-223ENST00000324771 C19orf81C9J6K1 198 aa12.66□□□□□ -0.38
DDR1-223ENST00000324771 ATP9AO75110 1047 aa12.66□□□□□ -0.38
DDR1-223ENST00000324771 GRAP2O75791 330 aa12.66□□□□□ -0.38
DDR1-223ENST00000324771 KRT14P02533 472 aa12.66□□□□□ -0.38
DDR1-223ENST00000324771 CLCN3P51790 818 aa12.66□□□□□ -0.38
DDR1-223ENST00000324771 ATP11AP98196 1134 aa12.66□□□□□ -0.38
DDR1-223ENST00000324771 TRIM59Q8IWR1 403 aa12.66□□□□□ -0.38
DDR1-223ENST00000324771 RPS6KC1Q96S38 1066 aa12.66□□□□□ -0.38
DDR1-223ENST00000324771 COL1A1P02452 1464 aaPredicted RBP12.66□□□□□ -0.38
DDR1-223ENST00000324771 SETD1AO15047 1707 aaKnown RBP12.66□□□□□ -0.38
DDR1-223ENST00000324771 CLGNO14967 610 aa12.66□□□□□ -0.38
DDR1-223ENST00000324771 RARRES1P49788 294 aa12.66□□□□□ -0.38
DDR1-223ENST00000324771 HNRNPH2P55795 449 aaKnown RBP12.66□□□□□ -0.38
DDR1-223ENST00000324771 ARPP19P56211 112 aa12.66□□□□□ -0.38
DDR1-223ENST00000324771 IFT88Q13099 833 aa12.66□□□□□ -0.38
DDR1-223ENST00000324771 CCDC38Q502W7 563 aa12.66□□□□□ -0.38
DDR1-223ENST00000324771 MAP1SQ66K74 1059 aaPredicted RBP12.66□□□□□ -0.38
DDR1-223ENST00000324771 FBXO16Q8IX29 292 aaPredicted RBP12.66□□□□□ -0.38
DDR1-223ENST00000324771 CCNYQ8ND76 341 aa12.66□□□□□ -0.38
DDR1-223ENST00000324771 TAS1R2Q8TE23 839 aa12.66□□□□□ -0.38
DDR1-223ENST00000324771 SLC20A1Q8WUM9 679 aa12.66□□□□□ -0.38
DDR1-223ENST00000324771 TRAPPC12Q8WVT3 735 aa12.66□□□□□ -0.38
DDR1-223ENST00000324771 MRPL47Q9HD33 250 aaKnown RBP12.66□□□□□ -0.38
DDR1-223ENST00000324771 RNF14Q9UBS8 474 aa12.66□□□□□ -0.38
DDR1-223ENST00000324771 MKRN1Q9UHC7 482 aaKnown RBP12.66□□□□□ -0.38
DDR1-223ENST00000324771 LMO7Q8WWI1 1683 aa12.66□□□□□ -0.38
DDR1-223ENST00000324771 WDR91A4D1P6 747 aa12.66□□□□□ -0.38
DDR1-223ENST00000324771 PRKCBP05771 671 aa12.66□□□□□ -0.38
DDR1-223ENST00000324771 CYP2B6P20813 491 aa12.66□□□□□ -0.38
DDR1-223ENST00000324771 BRD2P25440 801 aaKnown RBP12.66□□□□□ -0.38
DDR1-223ENST00000324771 KCTD6Q8NC69 237 aa12.66□□□□□ -0.38
DDR1-223ENST00000324771 KAT5Q92993 513 aa12.66□□□□□ -0.38
DDR1-223ENST00000324771 EDEM3Q9BZQ6 932 aa12.66□□□□□ -0.38
DDR1-223ENST00000324771 MTFR1LQ9H019 292 aa12.66□□□□□ -0.38
DDR1-223ENST00000324771 HEY1Q9Y5J3 304 aa12.66□□□□□ -0.38
DDR1-223ENST00000324771 GOLGA4Q13439 2230 aaKnown RBP12.66□□□□□ -0.38
DDR1-223ENST00000324771 RCCD1A6NED2 376 aa12.65□□□□□ -0.38
DDR1-223ENST00000324771 GOLGA8KD6RF30 607 aa12.65□□□□□ -0.38
DDR1-223ENST00000324771 SGPL1O95470 568 aa12.65□□□□□ -0.38
DDR1-223ENST00000324771 HLA-DRAP01903 254 aa12.65□□□□□ -0.38
DDR1-223ENST00000324771 TCF7P36402 384 aaPredicted RBP12.65□□□□□ -0.38
DDR1-223ENST00000324771 C9orf131Q5VYM1 1079 aa12.65□□□□□ -0.38
DDR1-223ENST00000324771 TWF2Q6IBS0 349 aaKnown RBP12.65□□□□□ -0.38
DDR1-223ENST00000324771 MMS22LQ6ZRQ5 1243 aa12.65□□□□□ -0.38
DDR1-223ENST00000324771 SPIRE2Q8WWL2 714 aa12.65□□□□□ -0.38
DDR1-223ENST00000324771 DNAJC19Q96DA6 116 aa12.65□□□□□ -0.38
DDR1-223ENST00000324771 FAM114A2Q9NRY5 505 aa12.65□□□□□ -0.38
DDR1-223ENST00000324771 ALG6Q9Y672 507 aa12.65□□□□□ -0.38
DDR1-223ENST00000324771 ITGB5P18084 799 aa12.65□□□□□ -0.38
DDR1-223ENST00000324771 RGS7P49802 495 aa12.65□□□□□ -0.38
DDR1-223ENST00000324771 TTC31Q49AM3 519 aaPredicted RBP12.65□□□□□ -0.38
DDR1-223ENST00000324771 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.65□□□□□ -0.383e-6■■■□□ 17.9
DDR1-223ENST00000324771 MRPL4Q9BYD3 311 aaKnown RBP12.65□□□□□ -0.38
DDR1-223ENST00000324771 TBX20Q9UMR3 447 aa12.65□□□□□ -0.38
DDR1-223ENST00000324771 LDHAP00338 332 aaKnown RBP12.65□□□□□ -0.38
DDR1-223ENST00000324771 MAN1A1P33908 653 aa12.65□□□□□ -0.38
DDR1-223ENST00000324771 NAB2Q15742 525 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms