RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 NEK2P51955 445 aa22.29■■□□□ 1.16
RNF40-201ENST00000324685 TMCO5AQ8N6Q1 288 aa22.29■■□□□ 1.16
RNF40-201ENST00000324685 EGFL8Q99944 293 aa22.29■■□□□ 1.16
RNF40-201ENST00000324685 URGCPQ8TCY9 931 aa22.29■■□□□ 1.16
RNF40-201ENST00000324685 SLC10A4Q96EP9 437 aa22.29■■□□□ 1.16
RNF40-201ENST00000324685 RMDN2Q96LZ7 410 aa22.29■■□□□ 1.16
RNF40-201ENST00000324685 FBXL5Q9UKA1 691 aa22.29■■□□□ 1.16
RNF40-201ENST00000324685 TTC23LQ6PF05 361 aa22.28■■□□□ 1.16
RNF40-201ENST00000324685 PATL1Q86TB9 770 aaKnown RBP22.28■■□□□ 1.16
RNF40-201ENST00000324685 ENAHQ8N8S7 591 aaPredicted RBP22.28■■□□□ 1.16
RNF40-201ENST00000324685 POLR3FQ9H1D9 316 aaPredicted RBP22.28■■□□□ 1.16
RNF40-201ENST00000324685 TMEM94Q12767 1356 aa22.28■■□□□ 1.16
RNF40-201ENST00000324685 TTC26A0AVF1 554 aa22.28■■□□□ 1.16
RNF40-201ENST00000324685 ATICP31939 592 aa22.28■■□□□ 1.16
RNF40-201ENST00000324685 RAPGEF5Q92565 580 aa22.28■■□□□ 1.16
RNF40-201ENST00000324685 OSBPL1AQ9BXW6 950 aa22.28■■□□□ 1.16
RNF40-201ENST00000324685 QTRT2Q9H974 415 aaKnown RBP22.28■■□□□ 1.16
RNF40-201ENST00000324685 METP08581 1390 aa22.28■■□□□ 1.16
RNF40-201ENST00000324685 PRAMEP78395 509 aa22.28■■□□□ 1.16
RNF40-201ENST00000324685 NCAPHQ15003 741 aa22.28■■□□□ 1.16
RNF40-201ENST00000324685 TRIM54Q9BYV2 358 aa22.28■■□□□ 1.16
RNF40-201ENST00000324685 ESYT3A0FGR9 886 aa22.28■■□□□ 1.16
RNF40-201ENST00000324685 PSMC5P62195 406 aa22.28■■□□□ 1.16
RNF40-201ENST00000324685 ALX1Q15699 326 aa22.28■■□□□ 1.16
RNF40-201ENST00000324685 DALRD3Q5D0E6 543 aaKnown RBP22.28■■□□□ 1.16
RNF40-201ENST00000324685 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP22.28■■□□□ 1.16
RNF40-201ENST00000324685 RAVER2Q9HCJ3 691 aaKnown RBP22.28■■□□□ 1.16
RNF40-201ENST00000324685 USP17L10C9JJH3 530 aa22.27■■□□□ 1.16
RNF40-201ENST00000324685 APOL1O14791 398 aa22.27■■□□□ 1.16
RNF40-201ENST00000324685 TYK2P29597 1187 aa22.27■■□□□ 1.16
RNF40-201ENST00000324685 MAP3K10Q02779 954 aa22.27■■□□□ 1.16
RNF40-201ENST00000324685 USP17L15C9J2P7 530 aa22.27■■□□□ 1.16
RNF40-201ENST00000324685 USP17L13C9JLJ4 530 aa22.27■■□□□ 1.16
RNF40-201ENST00000324685 USP17L11C9JVI0 530 aa22.27■■□□□ 1.16
RNF40-201ENST00000324685 USP17L18D6R9N7 530 aa22.27■■□□□ 1.16
RNF40-201ENST00000324685 USP17L22D6RA61 530 aa22.27■■□□□ 1.16
RNF40-201ENST00000324685 USP17L17D6RBQ6 530 aa22.27■■□□□ 1.16
RNF40-201ENST00000324685 USP17L19D6RCP7 530 aa22.27■■□□□ 1.16
RNF40-201ENST00000324685 USP17L20D6RJB6 530 aa22.27■■□□□ 1.16
RNF40-201ENST00000324685 EFCAB14O75071 495 aa22.27■■□□□ 1.16
RNF40-201ENST00000324685 USP17L24Q0WX57 530 aa22.27■■□□□ 1.16
RNF40-201ENST00000324685 USP17L6PQ6QN14 398 aa22.27■■□□□ 1.16
RNF40-201ENST00000324685 SARS2Q9NP81 518 aaKnown RBP22.27■■□□□ 1.16
RNF40-201ENST00000324685 GJB4Q9NTQ9 266 aa22.27■■□□□ 1.16
RNF40-201ENST00000324685 CYP2E1P05181 493 aaPredicted RBP22.27■■□□□ 1.16
RNF40-201ENST00000324685 TWF2Q6IBS0 349 aaKnown RBP22.27■■□□□ 1.16
RNF40-201ENST00000324685 LRRC8EQ6NSJ5 796 aa22.27■■□□□ 1.16
RNF40-201ENST00000324685 SLC13A1Q9BZW2 595 aa22.27■■□□□ 1.16
RNF40-201ENST00000324685 STAT3P40763 770 aa22.27■■□□□ 1.16
RNF40-201ENST00000324685 KRT17Q04695 432 aa22.27■■□□□ 1.16
RNF40-201ENST00000324685 HDAC6Q9UBN7 1215 aa22.27■■□□□ 1.16
RNF40-201ENST00000324685 CFAP69A5D8W1 941 aa22.27■■□□□ 1.15
RNF40-201ENST00000324685 CCDC144BQ3MJ40 725 aa22.27■■□□□ 1.15
RNF40-201ENST00000324685 SH3TC2Q8TF17 1288 aa22.27■■□□□ 1.15
RNF40-201ENST00000324685 STAMBPL1Q96FJ0 436 aa22.27■■□□□ 1.15
RNF40-201ENST00000324685 TMEM260Q9NX78 707 aa22.27■■□□□ 1.15
RNF40-201ENST00000324685 MOSPD1Q9UJG1 213 aa22.27■■□□□ 1.15
RNF40-201ENST00000324685 NNMTP40261 264 aa22.26■■□□□ 1.15
RNF40-201ENST00000324685 CUL3Q13618 768 aa22.26■■□□□ 1.15
RNF40-201ENST00000324685 COG1Q8WTW3 980 aa22.26■■□□□ 1.15
RNF40-201ENST00000324685 ANKRD65E5RJM6 399 aa22.26■■□□□ 1.15
RNF40-201ENST00000324685 AP3B1O00203 1094 aa22.26■■□□□ 1.15
RNF40-201ENST00000324685 PCYT1AP49585 367 aa22.26■■□□□ 1.15
RNF40-201ENST00000324685 LRRC14Q15048 493 aa22.26■■□□□ 1.15
RNF40-201ENST00000324685 TRADDQ15628 312 aa22.26■■□□□ 1.15
RNF40-201ENST00000324685 ITM2BQ9Y287 266 aa22.26■■□□□ 1.15
RNF40-201ENST00000324685 PLEKHG2Q9H7P9 1386 aa22.26■■□□□ 1.15
RNF40-201ENST00000324685 SLC16A3O15427 465 aaKnown RBP22.26■■□□□ 1.15
RNF40-201ENST00000324685 HIC1Q14526 733 aa22.26■■□□□ 1.15
RNF40-201ENST00000324685 DDIASQ8IXT1 998 aa22.26■■□□□ 1.15
RNF40-201ENST00000324685 PIGBQ92521 554 aa22.26■■□□□ 1.15
RNF40-201ENST00000324685 PAWRQ96IZ0 340 aaKnown RBP22.26■■□□□ 1.15
RNF40-201ENST00000324685 ATP1A1P05023 1023 aaKnown RBP22.26■■□□□ 1.15
RNF40-201ENST00000324685 FASTKD1Q53R41 847 aaKnown RBP22.26■■□□□ 1.15
RNF40-201ENST00000324685 SNRNP48Q6IEG0 339 aaKnown RBP22.26■■□□□ 1.15
RNF40-201ENST00000324685 NR1H4Q96RI1 486 aaPredicted RBP22.26■■□□□ 1.15
RNF40-201ENST00000324685 AGPAT1Q99943 283 aa22.26■■□□□ 1.15
RNF40-201ENST00000324685 CYP4F11Q9HBI6 524 aa22.26■■□□□ 1.15
RNF40-201ENST00000324685 GPBP1L1Q9HC44 474 aaPredicted RBP22.26■■□□□ 1.15
RNF40-201ENST00000324685 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.26■■□□□ 1.15
RNF40-201ENST00000324685 RTN2O75298 545 aa22.25■■□□□ 1.15
RNF40-201ENST00000324685 AGTP01019 485 aa22.25■■□□□ 1.15
RNF40-201ENST00000324685 KCNB1Q14721 858 aa22.25■■□□□ 1.15
RNF40-201ENST00000324685 FAM102AQ5T9C2 384 aaPredicted RBP22.25■■□□□ 1.15
RNF40-201ENST00000324685 MTHFD1LQ6UB35 978 aa22.25■■□□□ 1.15
RNF40-201ENST00000324685 TRAF3IP3Q9Y228 551 aa22.25■■□□□ 1.15
RNF40-201ENST00000324685 MORC2Q9Y6X9 1032 aaPredicted RBP22.25■■□□□ 1.15
RNF40-201ENST00000324685 ZNF335Q9H4Z2 1342 aaPredicted RBP22.25■■□□□ 1.15
RNF40-201ENST00000324685 FAM95CA0A1B0GW59 222 aa22.25■■□□□ 1.15
RNF40-201ENST00000324685 POTEFA5A3E0 1075 aa22.25■■□□□ 1.15
RNF40-201ENST00000324685 POTEIP0CG38 1075 aa22.25■■□□□ 1.15
RNF40-201ENST00000324685 HLA-DPA1P20036 260 aa22.25■■□□□ 1.15
RNF40-201ENST00000324685 RAP1GDS1P52306 607 aa22.25■■□□□ 1.15
RNF40-201ENST00000324685 POTEGQ6S5H5 508 aa22.25■■□□□ 1.15
RNF40-201ENST00000324685 POTEEQ6S8J3 1075 aa22.25■■□□□ 1.15
RNF40-201ENST00000324685 KDM4CQ9H3R0 1056 aa22.25■■□□□ 1.15
RNF40-201ENST00000324685 SPATA21Q7Z572 469 aa22.25■■□□□ 1.15
RNF40-201ENST00000324685 EPAS1Q99814 870 aa22.25■■□□□ 1.15
RNF40-201ENST00000324685 DHX35Q9H5Z1 703 aaKnown RBP22.25■■□□□ 1.15
RNF40-201ENST00000324685 ADGRL3Q9HAR2 1447 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms