RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 ERMARDQ5T6L9 678 aa21.39■■□□□ 1.01
CRLF3-201ENST00000324238 FAM228AQ86W67 206 aa21.39■■□□□ 1.01
CRLF3-201ENST00000324238 TBC1D31Q96DN5 1066 aa21.39■■□□□ 1.01
CRLF3-201ENST00000324238 H0YIN7 160 aa21.39■■□□□ 1.01
CRLF3-201ENST00000324238 SORBS3O60504 671 aa21.39■■□□□ 1.01
CRLF3-201ENST00000324238 SSTR3P32745 418 aaPredicted RBP21.39■■□□□ 1.01
CRLF3-201ENST00000324238 EIF1ADQ8N9N8 165 aaKnown RBP21.39■■□□□ 1.01
CRLF3-201ENST00000324238 ATG4AQ8WYN0 398 aa21.39■■□□□ 1.01
CRLF3-201ENST00000324238 KIFC3Q9BVG8 833 aa21.39■■□□□ 1.01
CRLF3-201ENST00000324238 TRIM7Q9C029 511 aa21.39■■□□□ 1.01
CRLF3-201ENST00000324238 CTNNAL1Q9UBT7 734 aa21.39■■□□□ 1.01
CRLF3-201ENST00000324238 SPOPO43791 374 aa21.38■■□□□ 1.01
CRLF3-201ENST00000324238 ECM2O94769 699 aaPredicted RBP21.38■■□□□ 1.01
CRLF3-201ENST00000324238 DLATP10515 647 aaKnown RBP21.38■■□□□ 1.01
CRLF3-201ENST00000324238 PRELPP51888 382 aa21.38■■□□□ 1.01
CRLF3-201ENST00000324238 SEPT14Q6ZU15 432 aa21.38■■□□□ 1.01
CRLF3-201ENST00000324238 NOP9Q86U38 636 aaKnown RBP21.38■■□□□ 1.01
CRLF3-201ENST00000324238 DHX38Q92620 1227 aaKnown RBP21.38■■□□□ 1.01
CRLF3-201ENST00000324238 TMEM39BQ9GZU3 492 aa21.38■■□□□ 1.01
CRLF3-201ENST00000324238 MAP2K2P36507 400 aa21.38■■□□□ 1.01
CRLF3-201ENST00000324238 SWT1Q5T5J6 900 aaKnown RBP21.38■■□□□ 1.01
CRLF3-201ENST00000324238 KIRREL3Q8IZU9 778 aa21.38■■□□□ 1.01
CRLF3-201ENST00000324238 SAAL1Q96ER3 474 aa21.38■■□□□ 1.01
CRLF3-201ENST00000324238 AGBL1Q96MI9 1066 aa21.38■■□□□ 1.01
CRLF3-201ENST00000324238 FRMPD4Q14CM0 1322 aa21.37■■□□□ 1.01
CRLF3-201ENST00000324238 YDJCA8MPS7 323 aa21.37■■□□□ 1.01
CRLF3-201ENST00000324238 PPP1R7Q15435 360 aa21.37■■□□□ 1.01
CRLF3-201ENST00000324238 FAM129AQ9BZQ8 928 aa21.37■■□□□ 1.01
CRLF3-201ENST00000324238 TOPORSQ9NS56 1045 aaPredicted RBP21.37■■□□□ 1.01
CRLF3-201ENST00000324238 INTS9Q9NV88 658 aaKnown RBP21.37■■□□□ 1.01
CRLF3-201ENST00000324238 DMAC2Q9NW81 257 aa21.37■■□□□ 1.01
CRLF3-201ENST00000324238 TPX2Q9ULW0 747 aaKnown RBP21.37■■□□□ 1.01
CRLF3-201ENST00000324238 CLDN3O15551 220 aa21.37■■□□□ 1.01
CRLF3-201ENST00000324238 RARAP10276 462 aa21.37■■□□□ 1.01
CRLF3-201ENST00000324238 TNIP1Q15025 636 aa21.37■■□□□ 1.01
CRLF3-201ENST00000324238 PADI6Q6TGC4 694 aa21.37■■□□□ 1.01
CRLF3-201ENST00000324238 IDI2Q9BXS1 227 aa21.37■■□□□ 1.01
CRLF3-201ENST00000324238 EIF3DO15371 548 aaKnown RBP eCLIP21.36■■□□□ 1.01
CRLF3-201ENST00000324238 HIBCHQ6NVY1 386 aaPredicted RBP21.36■■□□□ 1.01
CRLF3-201ENST00000324238 ANKRD42Q8N9B4 389 aa21.36■■□□□ 1.01
CRLF3-201ENST00000324238 TCP11Q8WWU5 503 aa21.36■■□□□ 1.01
CRLF3-201ENST00000324238 CCT6BQ92526 530 aa21.36■■□□□ 1.01
CRLF3-201ENST00000324238 NCAPGQ9BPX3 1015 aa21.36■■□□□ 1.01
CRLF3-201ENST00000324238 ZSWIM1Q9BR11 485 aa21.36■■□□□ 1.01
CRLF3-201ENST00000324238 TRPC6Q9Y210 931 aa21.36■■□□□ 1.01
CRLF3-201ENST00000324238 GRIPAP1Q4V328 841 aa21.36■■□□□ 1.01
CRLF3-201ENST00000324238 CEP55Q53EZ4 464 aa21.36■■□□□ 1.01
CRLF3-201ENST00000324238 PRUNE1Q86TP1 453 aa21.36■■□□□ 1.01
CRLF3-201ENST00000324238 PARP9Q8IXQ6 854 aa21.36■■□□□ 1.01
CRLF3-201ENST00000324238 ATXN2Q99700 1313 aaKnown RBP21.36■■□□□ 1.01
CRLF3-201ENST00000324238 MYH11P35749 1972 aa21.36■■□□□ 1.01
CRLF3-201ENST00000324238 PHF2O75151 1096 aa21.36■■□□□ 1.01
CRLF3-201ENST00000324238 POLR2MP0CAP2 368 aa21.36■■□□□ 1.01
CRLF3-201ENST00000324238 CHRNB2P17787 502 aa21.36■■□□□ 1.01
CRLF3-201ENST00000324238 RDXP35241 583 aaKnown RBP21.36■■□□□ 1.01
CRLF3-201ENST00000324238 VAMP7P51809 220 aa21.36■■□□□ 1.01
CRLF3-201ENST00000324238 CCDC91Q7Z6B0 441 aa21.36■■□□□ 1.01
CRLF3-201ENST00000324238 HOOK3Q86VS8 718 aa21.36■■□□□ 1.01
CRLF3-201ENST00000324238 ATXN2LQ8WWM7 1075 aaKnown RBP21.36■■□□□ 1.01
CRLF3-201ENST00000324238 ZNF317Q96PQ6 595 aaPredicted RBP21.36■■□□□ 1.01
CRLF3-201ENST00000324238 NACC1Q96RE7 527 aa21.36■■□□□ 1.01
CRLF3-201ENST00000324238 TTC7AQ9ULT0 858 aaPredicted RBP21.36■■□□□ 1.01
CRLF3-201ENST00000324238 USP20Q9Y2K6 914 aa21.36■■□□□ 1.01
CRLF3-201ENST00000324238 ZNF831Q5JPB2 1677 aa21.35■■□□□ 1.01
CRLF3-201ENST00000324238 IPO5O00410 1097 aaKnown RBP21.35■■□□□ 1.01
CRLF3-201ENST00000324238 CLSTN1O94985 981 aa21.35■■□□□ 1.01
CRLF3-201ENST00000324238 SOX10P56693 466 aa21.35■■□□□ 1.01
CRLF3-201ENST00000324238 GPC5P78333 572 aa21.35■■□□□ 1.01
CRLF3-201ENST00000324238 C1orf220Q5T0J3 134 aa21.35■■□□□ 1.01
CRLF3-201ENST00000324238 TBC1D1Q86TI0 1168 aaPredicted RBP21.35■■□□□ 1.01
CRLF3-201ENST00000324238 PNMA8AQ86V59 439 aaPredicted RBP21.35■■□□□ 1.01
CRLF3-201ENST00000324238 NUP85Q9BW27 656 aa21.35■■□□□ 1.01
CRLF3-201ENST00000324238 BAIAP2L1Q9UHR4 511 aa21.35■■□□□ 1.01
CRLF3-201ENST00000324238 SLC16A4O15374 487 aa21.35■■□□□ 1.01
CRLF3-201ENST00000324238 KIF22Q14807 665 aa21.35■■□□□ 1.01
CRLF3-201ENST00000324238 UBL4BQ8N7F7 174 aa21.35■■□□□ 1.01
CRLF3-201ENST00000324238 CCDC197Q8NCU1 140 aa21.35■■□□□ 1.01
CRLF3-201ENST00000324238 IL31RAQ8NI17 732 aa21.35■■□□□ 1.01
CRLF3-201ENST00000324238 GDAP1Q8TB36 358 aa21.35■■□□□ 1.01
CRLF3-201ENST00000324238 SEMA4DQ92854 862 aa21.35■■□□□ 1.01
CRLF3-201ENST00000324238 GMCL1Q96IK5 515 aa21.35■■□□□ 1.01
CRLF3-201ENST00000324238 WDR11Q9BZH6 1224 aa21.35■■□□□ 1.01
CRLF3-201ENST00000324238 ABCF3Q9NUQ8 709 aa21.35■■□□□ 1.01
CRLF3-201ENST00000324238 TBK1Q9UHD2 729 aa21.35■■□□□ 1.01
CRLF3-201ENST00000324238 CLTAP09496 248 aa21.34■■□□□ 1.01
CRLF3-201ENST00000324238 BCRP11274 1271 aa21.34■■□□□ 1.01
CRLF3-201ENST00000324238 CBWD2Q8IUF1 395 aa21.34■■□□□ 1.01
CRLF3-201ENST00000324238 TUFT1Q9NNX1 390 aa21.34■■□□□ 1.01
CRLF3-201ENST00000324238 ATAD5Q96QE3 1844 aa21.34■■□□□ 1.01
CRLF3-201ENST00000324238 ONECUT3O60422 494 aaPredicted RBP21.34■■□□□ 1.01
CRLF3-201ENST00000324238 PEX5P50542 639 aa21.34■■□□□ 1.01
CRLF3-201ENST00000324238 ZKSCAN8Q15776 578 aaPredicted RBP21.34■■□□□ 1.01
CRLF3-201ENST00000324238 CC2D2BQ6DHV5 1058 aa21.34■■□□□ 1.01
CRLF3-201ENST00000324238 SLC5A5Q92911 643 aa21.34■■□□□ 1.01
CRLF3-201ENST00000324238 KREMEN1Q96MU8 473 aa21.34■■□□□ 1.01
CRLF3-201ENST00000324238 NAP1L3Q99457 506 aaPredicted RBP21.34■■□□□ 1.01
CRLF3-201ENST00000324238 PI4K2AQ9BTU6 479 aa21.34■■□□□ 1.01
CRLF3-201ENST00000324238 PDGFDQ9GZP0 370 aaPredicted RBP21.34■■□□□ 1.01
CRLF3-201ENST00000324238 SPATA31A6Q5VVP1 1343 aa21.34■■□□□ 1.01
CRLF3-201ENST00000324238 C5orf60A6NFR6 353 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms