RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 ERP44Q9BS26 406 aa18.77■□□□□ 0.6
COL9A1-201ENST00000320755 TCRBV7S2A1N4TA0A589 114 aa18.77■□□□□ 0.59
COL9A1-201ENST00000320755 A6NNZ2 444 aa18.77■□□□□ 0.59
COL9A1-201ENST00000320755 SPOPO43791 374 aa18.77■□□□□ 0.59
COL9A1-201ENST00000320755 MTMR3Q13615 1198 aa18.77■□□□□ 0.59
COL9A1-201ENST00000320755 TUBB8Q3ZCM7 444 aa18.77■□□□□ 0.59
COL9A1-201ENST00000320755 JAMLQ86YT9 394 aa18.77■□□□□ 0.59
COL9A1-201ENST00000320755 UBL4BQ8N7F7 174 aa18.77■□□□□ 0.59
COL9A1-201ENST00000320755 ATP8B4Q8TF62 1192 aa18.77■□□□□ 0.59
COL9A1-201ENST00000320755 KREMEN1Q96MU8 473 aa18.77■□□□□ 0.59
COL9A1-201ENST00000320755 RMDN3Q96TC7 470 aa18.77■□□□□ 0.59
COL9A1-201ENST00000320755 NAP1L3Q99457 506 aaPredicted RBP18.77■□□□□ 0.59
COL9A1-201ENST00000320755 CNOT8Q9UFF9 292 aaKnown RBP18.77■□□□□ 0.59
COL9A1-201ENST00000320755 KIAA0754O94854 1291 aa18.76■□□□□ 0.59
COL9A1-201ENST00000320755 SNRNP35Q16560 246 aaKnown RBP18.76■□□□□ 0.59
COL9A1-201ENST00000320755 TTLL6Q8N841 843 aa18.76■□□□□ 0.59
COL9A1-201ENST00000320755 MYCBPAPQ8TBZ2 947 aa18.76■□□□□ 0.59
COL9A1-201ENST00000320755 FBXO25Q8TCJ0 367 aa18.76■□□□□ 0.59
COL9A1-201ENST00000320755 USP20Q9Y2K6 914 aa18.76■□□□□ 0.59
COL9A1-201ENST00000320755 ASTN2O75129 1339 aaPredicted RBP18.76■□□□□ 0.59
COL9A1-201ENST00000320755 KIF13BQ9NQT8 1826 aa18.76■□□□□ 0.59
COL9A1-201ENST00000320755 ERLIN2O94905 339 aa18.76■□□□□ 0.59
COL9A1-201ENST00000320755 SHBGP04278 402 aa18.76■□□□□ 0.59
COL9A1-201ENST00000320755 VCAM1P19320 739 aa18.76■□□□□ 0.59
COL9A1-201ENST00000320755 KCNJ1P48048 391 aa18.76■□□□□ 0.59
COL9A1-201ENST00000320755 B4GALNT4Q76KP1 1039 aa18.76■□□□□ 0.59
COL9A1-201ENST00000320755 OTUD6BQ8N6M0 293 aa18.76■□□□□ 0.59
COL9A1-201ENST00000320755 EIF1ADQ8N9N8 165 aaKnown RBP18.76■□□□□ 0.59
COL9A1-201ENST00000320755 MDM1Q8TC05 714 aa18.76■□□□□ 0.59
COL9A1-201ENST00000320755 NEK9Q8TD19 979 aa18.76■□□□□ 0.59
COL9A1-201ENST00000320755 EPS8L1Q8TE68 723 aa18.76■□□□□ 0.59
COL9A1-201ENST00000320755 CLSTN1O94985 981 aa18.75■□□□□ 0.59
COL9A1-201ENST00000320755 CHRNB2P17787 502 aa18.75■□□□□ 0.59
COL9A1-201ENST00000320755 ADSSP30520 456 aa18.75■□□□□ 0.59
COL9A1-201ENST00000320755 RASA3Q14644 834 aa18.75■□□□□ 0.59
COL9A1-201ENST00000320755 ARFGAP2Q8N6H7 521 aa18.75■□□□□ 0.59
COL9A1-201ENST00000320755 PI4K2AQ9BTU6 479 aa18.75■□□□□ 0.59
COL9A1-201ENST00000320755 WNT10BO00744 389 aa18.75■□□□□ 0.59
COL9A1-201ENST00000320755 CCNE2O96020 404 aa18.75■□□□□ 0.59
COL9A1-201ENST00000320755 PYGMP11217 842 aa18.75■□□□□ 0.59
COL9A1-201ENST00000320755 MCF2L2Q86YR7 1114 aa18.75■□□□□ 0.59
COL9A1-201ENST00000320755 FMNL3Q8IVF7 1028 aa18.75■□□□□ 0.59
COL9A1-201ENST00000320755 ZDHHC14Q8IZN3 488 aa18.75■□□□□ 0.59
COL9A1-201ENST00000320755 NUP85Q9BW27 656 aa18.75■□□□□ 0.59
COL9A1-201ENST00000320755 TTC7AQ9ULT0 858 aaPredicted RBP18.75■□□□□ 0.59
COL9A1-201ENST00000320755 UBIAD1Q9Y5Z9 338 aa18.75■□□□□ 0.59
COL9A1-201ENST00000320755 DENND3A2RUS2 1198 aa18.75■□□□□ 0.59
COL9A1-201ENST00000320755 RTN2O75298 545 aa18.75■□□□□ 0.59
COL9A1-201ENST00000320755 KRT5P13647 590 aa18.75■□□□□ 0.59
COL9A1-201ENST00000320755 CNGA1P29973 690 aa18.75■□□□□ 0.59
COL9A1-201ENST00000320755 IFT88Q13099 833 aa18.75■□□□□ 0.59
COL9A1-201ENST00000320755 ZNF653Q96CK0 615 aa18.75■□□□□ 0.59
COL9A1-201ENST00000320755 TRPC6Q9Y210 931 aa18.75■□□□□ 0.59
COL9A1-201ENST00000320755 GTF2BQ00403 316 aa18.74■□□□□ 0.59
COL9A1-201ENST00000320755 C2CD6Q53TS8 623 aa18.74■□□□□ 0.59
COL9A1-201ENST00000320755 UBAP2Q5T6F2 1119 aaKnown RBP18.74■□□□□ 0.59
COL9A1-201ENST00000320755 DUPD1Q68J44 220 aa18.74■□□□□ 0.59
COL9A1-201ENST00000320755 CCDC25Q86WR0 208 aa18.74■□□□□ 0.59
COL9A1-201ENST00000320755 CCDC105Q8IYK2 499 aa18.74■□□□□ 0.59
COL9A1-201ENST00000320755 PRELID2Q8N945 189 aa18.74■□□□□ 0.59
COL9A1-201ENST00000320755 TAS1R2Q8TE23 839 aa18.74■□□□□ 0.59
COL9A1-201ENST00000320755 ZSWIM1Q9BR11 485 aa18.74■□□□□ 0.59
COL9A1-201ENST00000320755 DBR1Q9UK59 544 aaKnown RBP18.74■□□□□ 0.59
COL9A1-201ENST00000320755 CAND2O75155 1236 aa18.74■□□□□ 0.59
COL9A1-201ENST00000320755 PDE4CQ08493 712 aa18.74■□□□□ 0.59
COL9A1-201ENST00000320755 ARHGEF16Q5VV41 709 aa18.74■□□□□ 0.59
COL9A1-201ENST00000320755 PCNX4Q63HM2 1172 aa18.74■□□□□ 0.59
COL9A1-201ENST00000320755 LMBRD2Q68DH5 695 aaPredicted RBP18.74■□□□□ 0.59
COL9A1-201ENST00000320755 BHMG1C9JSJ3 638 aaPredicted RBP18.73■□□□□ 0.59
COL9A1-201ENST00000320755 PLA2G6O60733 806 aa18.73■□□□□ 0.59
COL9A1-201ENST00000320755 RFX1P22670 979 aa18.73■□□□□ 0.59
COL9A1-201ENST00000320755 NPTX2P47972 431 aa18.73■□□□□ 0.59
COL9A1-201ENST00000320755 PPP2R2AP63151 447 aa18.73■□□□□ 0.59
COL9A1-201ENST00000320755 PGM5Q15124 567 aa18.73■□□□□ 0.59
COL9A1-201ENST00000320755 FBXW10Q5XX13 1052 aa18.73■□□□□ 0.59
COL9A1-201ENST00000320755 TTC27Q6P3X3 843 aa18.73■□□□□ 0.59
COL9A1-201ENST00000320755 ZNF564Q8TBZ8 553 aaPredicted RBP18.73■□□□□ 0.59
COL9A1-201ENST00000320755 POMGNT1Q8WZA1 660 aa18.73■□□□□ 0.59
COL9A1-201ENST00000320755 TATDN2Q93075 761 aa18.73■□□□□ 0.59
COL9A1-201ENST00000320755 TBX20Q9UMR3 447 aa18.73■□□□□ 0.59
COL9A1-201ENST00000320755 DIS3Q9Y2L1 958 aaKnown RBP18.73■□□□□ 0.59
COL9A1-201ENST00000320755 TELO2Q9Y4R8 837 aa18.73■□□□□ 0.59
COL9A1-201ENST00000320755 ATP8B3O60423 1300 aa18.73■□□□□ 0.59
COL9A1-201ENST00000320755 EGFRP00533 1210 aa18.73■□□□□ 0.59
COL9A1-201ENST00000320755 SLCO1A2P46721 670 aa18.73■□□□□ 0.59
COL9A1-201ENST00000320755 SMTNP53814 917 aa18.73■□□□□ 0.59
COL9A1-201ENST00000320755 MYBPC2Q14324 1141 aa18.73■□□□□ 0.59
COL9A1-201ENST00000320755 SEL1L2Q5TEA6 688 aa18.73■□□□□ 0.59
COL9A1-201ENST00000320755 CCDC137Q6PK04 289 aaKnown RBP18.73■□□□□ 0.59
COL9A1-201ENST00000320755 SEC14L1Q92503 715 aa18.73■□□□□ 0.59
COL9A1-201ENST00000320755 WNK4Q96J92 1243 aa18.73■□□□□ 0.59
COL9A1-201ENST00000320755 TBC1D22BQ9NU19 505 aa18.73■□□□□ 0.59
COL9A1-201ENST00000320755 PSMC5P62195 406 aa18.72■□□□□ 0.59
COL9A1-201ENST00000320755 EN1Q05925 392 aaPredicted RBP18.72■□□□□ 0.59
COL9A1-201ENST00000320755 BIRC3Q13489 604 aa18.72■□□□□ 0.59
COL9A1-201ENST00000320755 MTMR2Q13614 643 aa18.72■□□□□ 0.59
COL9A1-201ENST00000320755 KMT5AQ9NQR1 393 aa18.72■□□□□ 0.59
COL9A1-201ENST00000320755 NOCTQ9UK39 431 aaKnown RBP18.72■□□□□ 0.59
COL9A1-201ENST00000320755 PNMA2Q9UL42 364 aa18.72■□□□□ 0.59
COL9A1-201ENST00000320755 CAPN7Q9Y6W3 813 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms