RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 SOCS4Q8WXH5 440 aa19.39■□□□□ 0.69
RAB39A-201ENST00000320578 C16orf70Q9BSU1 422 aa19.39■□□□□ 0.69
RAB39A-201ENST00000320578 CCDC113Q9H0I3 377 aa19.39■□□□□ 0.69
RAB39A-201ENST00000320578 TMEM8AQ9HCN3 771 aa19.39■□□□□ 0.69
RAB39A-201ENST00000320578 LUC7LQ9NQ29 371 aaKnown RBP19.39■□□□□ 0.69
RAB39A-201ENST00000320578 UQCRHLA0A096LP55 91 aa19.38■□□□□ 0.69
RAB39A-201ENST00000320578 ZNF263O14978 683 aa19.38■□□□□ 0.69
RAB39A-201ENST00000320578 PJA2O43164 708 aa19.38■□□□□ 0.69
RAB39A-201ENST00000320578 GFPT2O94808 682 aa19.38■□□□□ 0.69
RAB39A-201ENST00000320578 IGHA2P01877 340 aa19.38■□□□□ 0.69
RAB39A-201ENST00000320578 UQCRHP07919 91 aa19.38■□□□□ 0.69
RAB39A-201ENST00000320578 FERP16591 822 aa19.38■□□□□ 0.69
RAB39A-201ENST00000320578 STAT1P42224 750 aa19.38■□□□□ 0.69
RAB39A-201ENST00000320578 MXI1P50539 228 aa19.38■□□□□ 0.69
RAB39A-201ENST00000320578 KLHL30Q0D2K2 578 aa19.38■□□□□ 0.69
RAB39A-201ENST00000320578 TUBB2AQ13885 445 aa19.38■□□□□ 0.69
RAB39A-201ENST00000320578 KRT39Q6A163 491 aa19.38■□□□□ 0.69
RAB39A-201ENST00000320578 ZSWIM2Q8NEG5 633 aa19.38■□□□□ 0.69
RAB39A-201ENST00000320578 WDR24Q96S15 920 aa19.38■□□□□ 0.69
RAB39A-201ENST00000320578 TUBB2BQ9BVA1 445 aa19.38■□□□□ 0.69
RAB39A-201ENST00000320578 TMEM117Q9H0C3 514 aa19.38■□□□□ 0.69
RAB39A-201ENST00000320578 RNPEPQ9H4A4 650 aa19.38■□□□□ 0.69
RAB39A-201ENST00000320578 SUCLA2Q9P2R7 463 aaPredicted RBP19.38■□□□□ 0.69
RAB39A-201ENST00000320578 PCDHA13Q9Y5I0 950 aa19.38■□□□□ 0.69
RAB39A-201ENST00000320578 ATP8B3O60423 1300 aa19.37■□□□□ 0.69
RAB39A-201ENST00000320578 A0A0B4J269 797 aa19.37■□□□□ 0.69
RAB39A-201ENST00000320578 GOLGA8IPA6NC78 632 aa19.37■□□□□ 0.69
RAB39A-201ENST00000320578 GOLGA8JA6NMD2 632 aa19.37■□□□□ 0.69
RAB39A-201ENST00000320578 C22orf31O95567 290 aa19.37■□□□□ 0.69
RAB39A-201ENST00000320578 CCDC172P0C7W6 258 aa19.37■□□□□ 0.69
RAB39A-201ENST00000320578 DRP2Q13474 957 aa19.37■□□□□ 0.69
RAB39A-201ENST00000320578 TDRD12Q587J7 1177 aaKnown RBP19.37■□□□□ 0.69
RAB39A-201ENST00000320578 C10orf76Q5T2E6 689 aa19.37■□□□□ 0.69
RAB39A-201ENST00000320578 LINC01465Q8N7H1 131 aa19.37■□□□□ 0.69
RAB39A-201ENST00000320578 JAKMIP2Q96AA8 810 aa19.37■□□□□ 0.69
RAB39A-201ENST00000320578 SAAL1Q96ER3 474 aa19.37■□□□□ 0.69
RAB39A-201ENST00000320578 SUGCTQ9HAC7 445 aa19.37■□□□□ 0.69
RAB39A-201ENST00000320578 AGO2Q9UKV8 859 aaKnown RBP19.37■□□□□ 0.69
RAB39A-201ENST00000320578 A0A0U1RQJ8 604 aa19.37■□□□□ 0.69
RAB39A-201ENST00000320578 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.37■□□□□ 0.69
RAB39A-201ENST00000320578 FANCGO15287 622 aa19.37■□□□□ 0.69
RAB39A-201ENST00000320578 CTIFO43310 598 aaKnown RBP19.37■□□□□ 0.69
RAB39A-201ENST00000320578 INSRRP14616 1297 aa19.37■□□□□ 0.69
RAB39A-201ENST00000320578 RGS2P41220 211 aa19.37■□□□□ 0.69
RAB39A-201ENST00000320578 KIF5AQ12840 1032 aa19.37■□□□□ 0.69
RAB39A-201ENST00000320578 PSMD6Q15008 389 aa19.37■□□□□ 0.69
RAB39A-201ENST00000320578 SLC18A3Q16572 532 aa19.37■□□□□ 0.69
RAB39A-201ENST00000320578 DGKDQ16760 1214 aa19.37■□□□□ 0.69
RAB39A-201ENST00000320578 IFNLR1Q8IU57 520 aaPredicted RBP19.37■□□□□ 0.69
RAB39A-201ENST00000320578 SMC1BQ8NDV3 1235 aa19.37■□□□□ 0.69
RAB39A-201ENST00000320578 ATRIPQ8WXE1 791 aa19.37■□□□□ 0.69
RAB39A-201ENST00000320578 MRPL4Q9BYD3 311 aaKnown RBP19.37■□□□□ 0.69
RAB39A-201ENST00000320578 IFIH1Q9BYX4 1025 aaKnown RBP19.37■□□□□ 0.69
RAB39A-201ENST00000320578 DNAJC12Q9UKB3 198 aa19.37■□□□□ 0.69
RAB39A-201ENST00000320578 ZHX1Q9UKY1 873 aaPredicted RBP19.37■□□□□ 0.69
RAB39A-201ENST00000320578 LRRIQ3A6PVS8 624 aaPredicted RBP19.36■□□□□ 0.69
RAB39A-201ENST00000320578 DYNC1I1O14576 645 aa19.36■□□□□ 0.69
RAB39A-201ENST00000320578 MSCO60682 206 aa19.36■□□□□ 0.69
RAB39A-201ENST00000320578 MMP3P08254 477 aa19.36■□□□□ 0.69
RAB39A-201ENST00000320578 SOX5P35711 763 aa19.36■□□□□ 0.69
RAB39A-201ENST00000320578 GCLMP48507 274 aa19.36■□□□□ 0.69
RAB39A-201ENST00000320578 TNFAIP2Q03169 654 aa19.36■□□□□ 0.69
RAB39A-201ENST00000320578 CCDC122Q5T0U0 273 aa19.36■□□□□ 0.69
RAB39A-201ENST00000320578 GJC2Q5T442 439 aaPredicted RBP19.36■□□□□ 0.69
RAB39A-201ENST00000320578 EFCAB12Q6NXP0 572 aa19.36■□□□□ 0.69
RAB39A-201ENST00000320578 OR6J1Q8NGC5 347 aa19.36■□□□□ 0.69
RAB39A-201ENST00000320578 GJD2Q9UKL4 321 aa19.36■□□□□ 0.69
RAB39A-201ENST00000320578 Q9Y3F1 56 aa19.36■□□□□ 0.69
RAB39A-201ENST00000320578 F8VZ95 297 aa19.35■□□□□ 0.69
RAB39A-201ENST00000320578 H3BRB1 525 aa19.35■□□□□ 0.69
RAB39A-201ENST00000320578 TOM1L1O75674 476 aa19.35■□□□□ 0.69
RAB39A-201ENST00000320578 GPC3P51654 580 aa19.35■□□□□ 0.69
RAB39A-201ENST00000320578 MAPK6Q16659 721 aa19.35■□□□□ 0.69
RAB39A-201ENST00000320578 ZNF569Q5MCW4 686 aa19.35■□□□□ 0.69
RAB39A-201ENST00000320578 FAM213AQ9BRX8 229 aa19.35■□□□□ 0.69
RAB39A-201ENST00000320578 TARS2Q9BW92 718 aaKnown RBP19.35■□□□□ 0.69
RAB39A-201ENST00000320578 FZD8Q9H461 694 aa19.35■□□□□ 0.69
RAB39A-201ENST00000320578 TUT1Q9H6E5 874 aaKnown RBP19.35■□□□□ 0.69
RAB39A-201ENST00000320578 GNEQ9Y223 722 aaKnown RBP19.35■□□□□ 0.69
RAB39A-201ENST00000320578 A6NJR5 290 aa19.35■□□□□ 0.69
RAB39A-201ENST00000320578 CA12O43570 354 aa19.35■□□□□ 0.69
RAB39A-201ENST00000320578 ZC3H11AO75152 810 aaKnown RBP eCLIP19.35■□□□□ 0.69
RAB39A-201ENST00000320578 MAGEA1P43355 309 aa19.35■□□□□ 0.69
RAB39A-201ENST00000320578 PTENP60484 403 aa19.35■□□□□ 0.69
RAB39A-201ENST00000320578 RNF149Q8NC42 400 aa19.35■□□□□ 0.69
RAB39A-201ENST00000320578 FAM81BQ96LP2 452 aa19.35■□□□□ 0.69
RAB39A-201ENST00000320578 APBA2Q99767 749 aa19.35■□□□□ 0.69
RAB39A-201ENST00000320578 ZNF865P0CJ78 1059 aaPredicted RBP19.34■□□□□ 0.69
RAB39A-201ENST00000320578 TMOD1P28289 359 aa19.34■□□□□ 0.69
RAB39A-201ENST00000320578 CYP27A1Q02318 531 aa19.34■□□□□ 0.69
RAB39A-201ENST00000320578 GRM1Q13255 1194 aa19.34■□□□□ 0.69
RAB39A-201ENST00000320578 DRAP1Q14919 205 aaPredicted RBP19.34■□□□□ 0.69
RAB39A-201ENST00000320578 PHLDB3Q6NSJ2 640 aa19.34■□□□□ 0.69
RAB39A-201ENST00000320578 C15orf39Q6ZRI6 1047 aa19.34■□□□□ 0.69
RAB39A-201ENST00000320578 VPS36Q86VN1 386 aa19.34■□□□□ 0.69
RAB39A-201ENST00000320578 LRRC71Q8N4P6 559 aa19.34■□□□□ 0.69
RAB39A-201ENST00000320578 ACO2Q99798 780 aaKnown RBP19.34■□□□□ 0.69
RAB39A-201ENST00000320578 IRX2Q9BZI1 471 aaPredicted RBP19.34■□□□□ 0.69
RAB39A-201ENST00000320578 LACRTQ9GZZ8 138 aa19.34■□□□□ 0.69
RAB39A-201ENST00000320578 AJAP1Q9UKB5 411 aaPredicted RBP19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms