RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 MYO1FO00160 1098 aa14.15□□□□□ -0.14
CPNE1-201ENST00000317677 SLC16A4O15374 487 aa14.15□□□□□ -0.14
CPNE1-201ENST00000317677 GOLGA6DP0CG33 693 aa14.15□□□□□ -0.14
CPNE1-201ENST00000317677 RPL13P26373 211 aaKnown RBP14.15□□□□□ -0.14
CPNE1-201ENST00000317677 GTF2BQ00403 316 aa14.15□□□□□ -0.14
CPNE1-201ENST00000317677 TMEM63BQ5T3F8 832 aa14.15□□□□□ -0.14
CPNE1-201ENST00000317677 PDXDC1Q6P996 788 aa14.15□□□□□ -0.14
CPNE1-201ENST00000317677 HAUS6Q7Z4H7 955 aa14.15□□□□□ -0.14
CPNE1-201ENST00000317677 ZNF483Q8TF39 744 aaPredicted RBP14.15□□□□□ -0.14
CPNE1-201ENST00000317677 BRI3BPQ8WY22 251 aa14.15□□□□□ -0.14
CPNE1-201ENST00000317677 CEP170P1Q96L14 293 aa14.15□□□□□ -0.14
CPNE1-201ENST00000317677 TIPINQ9BVW5 301 aa14.15□□□□□ -0.14
CPNE1-201ENST00000317677 CD248Q9HCU0 757 aa14.15□□□□□ -0.14
CPNE1-201ENST00000317677 GOLGA6AQ9NYA3 693 aa14.15□□□□□ -0.14
CPNE1-201ENST00000317677 TFR2Q9UP52 801 aa14.15□□□□□ -0.14
CPNE1-201ENST00000317677 MAFBQ9Y5Q3 323 aaPredicted RBP14.15□□□□□ -0.14
CPNE1-201ENST00000317677 ADGRA3Q8IWK6 1321 aa14.14□□□□□ -0.15
CPNE1-201ENST00000317677 BTBD19C9JJ37 291 aa14.14□□□□□ -0.15
CPNE1-201ENST00000317677 AGPSO00116 658 aa14.14□□□□□ -0.15
CPNE1-201ENST00000317677 ZNF263O14978 683 aa14.14□□□□□ -0.15
CPNE1-201ENST00000317677 TLR2O60603 784 aa14.14□□□□□ -0.15
CPNE1-201ENST00000317677 AFPP02771 609 aaKnown RBP14.14□□□□□ -0.15
CPNE1-201ENST00000317677 EPB41P11171 864 aaKnown RBP14.14□□□□□ -0.15
CPNE1-201ENST00000317677 ACTN1P12814 892 aa14.14□□□□□ -0.15
CPNE1-201ENST00000317677 SLC9A1P19634 815 aa14.14□□□□□ -0.15
CPNE1-201ENST00000317677 CYP2J2P51589 502 aa14.14□□□□□ -0.15
CPNE1-201ENST00000317677 CDK17Q00537 523 aa14.14□□□□□ -0.15
CPNE1-201ENST00000317677 SREBF2Q12772 1141 aa14.14□□□□□ -0.15
CPNE1-201ENST00000317677 MIS18BP1Q6P0N0 1132 aa14.14□□□□□ -0.15
CPNE1-201ENST00000317677 STXBP4Q6ZWJ1 553 aa14.14□□□□□ -0.15
CPNE1-201ENST00000317677 SLC9A9Q8IVB4 645 aa14.14□□□□□ -0.15
CPNE1-201ENST00000317677 FAM186BQ8IYM0 893 aa14.14□□□□□ -0.15
CPNE1-201ENST00000317677 MAB21L3Q8N8X9 362 aa14.14□□□□□ -0.15
CPNE1-201ENST00000317677 IQCDQ96DY2 449 aa14.14□□□□□ -0.15
CPNE1-201ENST00000317677 CCDC43Q96MW1 224 aaKnown RBP14.14□□□□□ -0.15
CPNE1-201ENST00000317677 MMP19Q99542 508 aa14.14□□□□□ -0.15
CPNE1-201ENST00000317677 NHEJ1Q9H9Q4 299 aaPredicted RBP14.14□□□□□ -0.15
CPNE1-201ENST00000317677 NLRC4Q9NPP4 1024 aa14.14□□□□□ -0.15
CPNE1-201ENST00000317677 CYP26B1Q9NR63 512 aa14.14□□□□□ -0.15
CPNE1-201ENST00000317677 TRIM10Q9UDY6 481 aa14.14□□□□□ -0.15
CPNE1-201ENST00000317677 SEPT9Q9UHD8 586 aaPredicted RBP14.14□□□□□ -0.15
CPNE1-201ENST00000317677 SIP14410 1827 aa14.14□□□□□ -0.15
CPNE1-201ENST00000317677 PSMC2P35998 433 aaKnown RBP14.14□□□□□ -0.15
CPNE1-201ENST00000317677 NPTX2P47972 431 aa14.14□□□□□ -0.15
CPNE1-201ENST00000317677 ACTN3Q08043 901 aaPredicted RBP14.14□□□□□ -0.15
CPNE1-201ENST00000317677 LY6KQ17RY6 165 aa14.14□□□□□ -0.15
CPNE1-201ENST00000317677 DCAF17Q5H9S7 520 aaPredicted RBP14.14□□□□□ -0.15
CPNE1-201ENST00000317677 HGSNATQ68CP4 663 aa14.14□□□□□ -0.15
CPNE1-201ENST00000317677 RRAGAQ7L523 313 aa14.14□□□□□ -0.15
CPNE1-201ENST00000317677 TMEM161BQ8NDZ6 487 aa14.14□□□□□ -0.15
CPNE1-201ENST00000317677 CBWD1Q9BRT8 395 aa14.14□□□□□ -0.15
CPNE1-201ENST00000317677 MKNK1Q9BUB5 465 aa14.14□□□□□ -0.15
CPNE1-201ENST00000317677 EDEM3Q9BZQ6 932 aa14.14□□□□□ -0.15
CPNE1-201ENST00000317677 METTL14Q9HCE5 456 aaKnown RBP14.14□□□□□ -0.15
CPNE1-201ENST00000317677 SIX2Q9NPC8 291 aa14.14□□□□□ -0.15
CPNE1-201ENST00000317677 RNF186Q9NXI6 227 aa14.14□□□□□ -0.15
CPNE1-201ENST00000317677 CEP72Q9P209 647 aa14.14□□□□□ -0.15
CPNE1-201ENST00000317677 AJAP1Q9UKB5 411 aaPredicted RBP14.14□□□□□ -0.15
CPNE1-201ENST00000317677 RCCD1A6NED2 376 aa14.13□□□□□ -0.15
CPNE1-201ENST00000317677 GOLGA8KD6RF30 607 aa14.13□□□□□ -0.15
CPNE1-201ENST00000317677 PDHXO00330 501 aa14.13□□□□□ -0.15
CPNE1-201ENST00000317677 TRPA1O75762 1119 aa14.13□□□□□ -0.15
CPNE1-201ENST00000317677 XRCC5P13010 732 aaKnown RBP14.13□□□□□ -0.15
CPNE1-201ENST00000317677 GGCXP38435 758 aa14.13□□□□□ -0.15
CPNE1-201ENST00000317677 POLR2FP61218 127 aaKnown RBP14.13□□□□□ -0.15
CPNE1-201ENST00000317677 FAM43BQ6ZT52 329 aaPredicted RBP14.13□□□□□ -0.15
CPNE1-201ENST00000317677 OTUD6AQ7L8S5 288 aa14.13□□□□□ -0.15
CPNE1-201ENST00000317677 HS2ST1Q7LGA3 356 aa14.13□□□□□ -0.15
CPNE1-201ENST00000317677 MORC4Q8TE76 937 aa14.13□□□□□ -0.15
CPNE1-201ENST00000317677 RPGRIP1Q96KN7 1286 aa14.13□□□□□ -0.15
CPNE1-201ENST00000317677 ACCSQ96QU6 501 aa14.13□□□□□ -0.15
CPNE1-201ENST00000317677 NAPGQ99747 312 aaPredicted RBP14.13□□□□□ -0.15
CPNE1-201ENST00000317677 ATP6V0A4Q9HBG4 840 aa14.13□□□□□ -0.15
CPNE1-201ENST00000317677 ZNF302Q9NR11 478 aa14.13□□□□□ -0.15
CPNE1-201ENST00000317677 BATF3Q9NR55 127 aa14.13□□□□□ -0.15
CPNE1-201ENST00000317677 CCL15-CCL14A0A0B4J2E2 113 aa14.13□□□□□ -0.15
CPNE1-201ENST00000317677 SRRM3A6NNA2 597 aaPredicted RBP14.13□□□□□ -0.15
CPNE1-201ENST00000317677 ANKRD63C9JTQ0 380 aa14.13□□□□□ -0.15
CPNE1-201ENST00000317677 PON1P27169 355 aa14.13□□□□□ -0.15
CPNE1-201ENST00000317677 COPB2P35606 906 aa14.13□□□□□ -0.15
CPNE1-201ENST00000317677 AMPD2Q01433 879 aa14.13□□□□□ -0.15
CPNE1-201ENST00000317677 ALCAMQ13740 583 aa14.13□□□□□ -0.15
CPNE1-201ENST00000317677 CCL15Q16663 113 aa14.13□□□□□ -0.15
CPNE1-201ENST00000317677 MTERF2Q49AM1 385 aa14.13□□□□□ -0.15
CPNE1-201ENST00000317677 XKR3Q5GH77 459 aa14.13□□□□□ -0.15
CPNE1-201ENST00000317677 EMC10Q5UCC4 262 aa14.13□□□□□ -0.15
CPNE1-201ENST00000317677 HOMEZQ8IX15 550 aa14.13□□□□□ -0.15
CPNE1-201ENST00000317677 C12orf56Q8IXR9 622 aa14.13□□□□□ -0.15
CPNE1-201ENST00000317677 SYCP3Q8IZU3 236 aa14.13□□□□□ -0.15
CPNE1-201ENST00000317677 SHCBP1Q8NEM2 672 aa14.13□□□□□ -0.15
CPNE1-201ENST00000317677 PCIF1Q9H4Z3 704 aa14.13□□□□□ -0.15
CPNE1-201ENST00000317677 MROH8Q9H579 483 aa14.13□□□□□ -0.15
CPNE1-201ENST00000317677 ETAA1Q9NY74 926 aa14.13□□□□□ -0.15
CPNE1-201ENST00000317677 DKC1O60832 514 aaKnown RBP eCLIP14.12□□□□□ -0.15
CPNE1-201ENST00000317677 GGPS1O95749 300 aa14.12□□□□□ -0.15
CPNE1-201ENST00000317677 OATP04181 439 aa14.12□□□□□ -0.15
CPNE1-201ENST00000317677 ZBTB48P10074 688 aaPredicted RBP14.12□□□□□ -0.15
CPNE1-201ENST00000317677 RWDD2BP57060 319 aa14.12□□□□□ -0.15
CPNE1-201ENST00000317677 KCTD2Q14681 263 aa14.12□□□□□ -0.15
CPNE1-201ENST00000317677 ASTE1Q2TB18 679 aaPredicted RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms