RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 ZDHHC15Q96MV8 337 aa20.55■□□□□ 0.88
RTN4-201ENST00000317610 THSD7AQ9UPZ6 1657 aa20.55■□□□□ 0.88
RTN4-201ENST00000317610 CFAP73A6NFT4 308 aa20.55■□□□□ 0.88
RTN4-201ENST00000317610 SMIM23A6NLE4 172 aa20.55■□□□□ 0.88
RTN4-201ENST00000317610 EZRP15311 586 aaKnown RBP20.55■□□□□ 0.88
RTN4-201ENST00000317610 CRKP46108 304 aa20.55■□□□□ 0.88
RTN4-201ENST00000317610 CEP57Q86XR8 500 aa20.55■□□□□ 0.88
RTN4-201ENST00000317610 SLC13A5Q86YT5 568 aaPredicted RBP20.55■□□□□ 0.88
RTN4-201ENST00000317610 ARHGEF19Q8IW93 802 aa20.55■□□□□ 0.88
RTN4-201ENST00000317610 RPUSD2Q8IZ73 545 aaKnown RBP20.55■□□□□ 0.88
RTN4-201ENST00000317610 HOOK2Q96ED9 719 aa20.55■□□□□ 0.88
RTN4-201ENST00000317610 ELAC2Q9BQ52 826 aaKnown RBP20.55■□□□□ 0.88
RTN4-201ENST00000317610 ZC3H12CQ9C0D7 883 aaKnown RBP20.55■□□□□ 0.88
RTN4-201ENST00000317610 TAOK3Q9H2K8 898 aa20.55■□□□□ 0.88
RTN4-201ENST00000317610 UBE2TQ9NPD8 197 aaPredicted RBP20.55■□□□□ 0.88
RTN4-201ENST00000317610 KDM4FA0A1W2PPD8 638 aa20.54■□□□□ 0.88
RTN4-201ENST00000317610 ANKRD63C9JTQ0 380 aa20.54■□□□□ 0.88
RTN4-201ENST00000317610 PYGMP11217 842 aa20.54■□□□□ 0.88
RTN4-201ENST00000317610 BMP3P12645 472 aa20.54■□□□□ 0.88
RTN4-201ENST00000317610 EPC2Q52LR7 807 aa20.54■□□□□ 0.88
RTN4-201ENST00000317610 HIBCHQ6NVY1 386 aaPredicted RBP20.54■□□□□ 0.88
RTN4-201ENST00000317610 TRMT10CQ7L0Y3 403 aaKnown RBP20.54■□□□□ 0.88
RTN4-201ENST00000317610 SH3BP5LQ7L8J4 393 aa20.54■□□□□ 0.88
RTN4-201ENST00000317610 CCDC63Q8NA47 563 aa20.54■□□□□ 0.88
RTN4-201ENST00000317610 ATP6V0A4Q9HBG4 840 aa20.54■□□□□ 0.88
RTN4-201ENST00000317610 MTUS1Q9ULD2 1270 aa20.54■□□□□ 0.88
RTN4-201ENST00000317610 NRXN2Q9P2S2 1712 aa20.54■□□□□ 0.88
RTN4-201ENST00000317610 EMSYQ7Z589 1322 aa20.54■□□□□ 0.88
RTN4-201ENST00000317610 PASKQ96RG2 1323 aa20.54■□□□□ 0.88
RTN4-201ENST00000317610 GZMAP12544 262 aa20.54■□□□□ 0.88
RTN4-201ENST00000317610 PPP1R7Q15435 360 aa20.54■□□□□ 0.88
RTN4-201ENST00000317610 SLC30A10Q6XR72 485 aa20.54■□□□□ 0.88
RTN4-201ENST00000317610 INTS8Q75QN2 995 aaKnown RBP20.54■□□□□ 0.88
RTN4-201ENST00000317610 BANK1Q8NDB2 785 aa20.54■□□□□ 0.88
RTN4-201ENST00000317610 IDI2Q9BXS1 227 aa20.54■□□□□ 0.88
RTN4-201ENST00000317610 NOD2Q9HC29 1040 aa20.54■□□□□ 0.88
RTN4-201ENST00000317610 WRAP73Q9P2S5 460 aaPredicted RBP20.54■□□□□ 0.88
RTN4-201ENST00000317610 USP20Q9Y2K6 914 aa20.54■□□□□ 0.88
RTN4-201ENST00000317610 TMEM110-MUSTN1A8MSY1 372 aa20.53■□□□□ 0.88
RTN4-201ENST00000317610 CHMP2AO43633 222 aa20.53■□□□□ 0.88
RTN4-201ENST00000317610 SNX3O60493 162 aa20.53■□□□□ 0.88
RTN4-201ENST00000317610 VIMP08670 466 aaKnown RBP20.53■□□□□ 0.88
RTN4-201ENST00000317610 CHRNB2P17787 502 aa20.53■□□□□ 0.88
RTN4-201ENST00000317610 MESDQ14696 234 aa20.53■□□□□ 0.88
RTN4-201ENST00000317610 CRELD2Q6UXH1 353 aaPredicted RBP20.53■□□□□ 0.88
RTN4-201ENST00000317610 SLCO2A1Q92959 643 aa20.53■□□□□ 0.88
RTN4-201ENST00000317610 PCDHB18PQ96TA0 734 aa20.53■□□□□ 0.88
RTN4-201ENST00000317610 FAM198AQ9UFP1 575 aa20.53■□□□□ 0.88
RTN4-201ENST00000317610 SMCHD1A6NHR9 2005 aa20.53■□□□□ 0.88
RTN4-201ENST00000317610 TCRBV7S2A1N4TA0A589 114 aa20.53■□□□□ 0.88
RTN4-201ENST00000317610 PDE6CP51160 858 aa20.53■□□□□ 0.88
RTN4-201ENST00000317610 DLG4P78352 724 aa20.53■□□□□ 0.88
RTN4-201ENST00000317610 IKQ13123 557 aaPredicted RBP20.53■□□□□ 0.88
RTN4-201ENST00000317610 TLDC1Q6P9B6 456 aa20.53■□□□□ 0.88
RTN4-201ENST00000317610 EXOC3L1Q86VI1 746 aa20.53■□□□□ 0.88
RTN4-201ENST00000317610 NOCTQ9UK39 431 aaKnown RBP20.53■□□□□ 0.88
RTN4-201ENST00000317610 FAM170AA1A519 330 aa20.52■□□□□ 0.88
RTN4-201ENST00000317610 RARAP10276 462 aa20.52■□□□□ 0.88
RTN4-201ENST00000317610 SLCO1A2P46721 670 aa20.52■□□□□ 0.88
RTN4-201ENST00000317610 PPP3CAQ08209 521 aa20.52■□□□□ 0.88
RTN4-201ENST00000317610 CETN1Q12798 172 aa20.52■□□□□ 0.88
RTN4-201ENST00000317610 C12orf56Q8IXR9 622 aa20.52■□□□□ 0.88
RTN4-201ENST00000317610 DAW1Q8N136 415 aa20.52■□□□□ 0.88
RTN4-201ENST00000317610 UHMK1Q8TAS1 419 aaKnown RBP20.52■□□□□ 0.88
RTN4-201ENST00000317610 MRIQ9BWK5 157 aa20.52■□□□□ 0.88
RTN4-201ENST00000317610 LRRC19Q9H756 370 aa20.52■□□□□ 0.88
RTN4-201ENST00000317610 NPM3O75607 178 aaKnown RBP20.52■□□□□ 0.87
RTN4-201ENST00000317610 CYP1A2P05177 515 aa20.52■□□□□ 0.87
RTN4-201ENST00000317610 TCP10Q12799 353 aa20.52■□□□□ 0.87
RTN4-201ENST00000317610 B3GNT9Q6UX72 402 aa20.52■□□□□ 0.87
RTN4-201ENST00000317610 CCDC105Q8IYK2 499 aa20.52■□□□□ 0.87
RTN4-201ENST00000317610 SYCP3Q8IZU3 236 aa20.52■□□□□ 0.87
RTN4-201ENST00000317610 EPS8L1Q8TE68 723 aa20.52■□□□□ 0.87
RTN4-201ENST00000317610 HOMER3Q9NSC5 361 aa20.52■□□□□ 0.87
RTN4-201ENST00000317610 DBR1Q9UK59 544 aaKnown RBP20.52■□□□□ 0.87
RTN4-201ENST00000317610 PRR12Q9ULL5 1215 aa20.52■□□□□ 0.87
RTN4-201ENST00000317610 PMM2O15305 246 aa20.51■□□□□ 0.87
RTN4-201ENST00000317610 GAS7O60861 476 aa20.51■□□□□ 0.87
RTN4-201ENST00000317610 HIP1RO75146 1068 aa20.51■□□□□ 0.87
RTN4-201ENST00000317610 VAMP7P51809 220 aa20.51■□□□□ 0.87
RTN4-201ENST00000317610 DOK7Q18PE1 504 aa20.51■□□□□ 0.87
RTN4-201ENST00000317610 ABCB5Q2M3G0 1257 aa20.51■□□□□ 0.87
RTN4-201ENST00000317610 C1orf220Q5T0J3 134 aa20.51■□□□□ 0.87
RTN4-201ENST00000317610 FAM71AQ8IYT1 594 aa20.51■□□□□ 0.87
RTN4-201ENST00000317610 RDH13Q8NBN7 331 aa20.51■□□□□ 0.87
RTN4-201ENST00000317610 N4BP2L2Q92802 583 aaPredicted RBP20.51■□□□□ 0.87
RTN4-201ENST00000317610 WDR11Q9BZH6 1224 aa20.51■□□□□ 0.87
RTN4-201ENST00000317610 KCNQ5Q9NR82 932 aa20.51■□□□□ 0.87
RTN4-201ENST00000317610 LRRC4BQ9NT99 713 aa20.51■□□□□ 0.87
RTN4-201ENST00000317610 ABCF3Q9NUQ8 709 aa20.51■□□□□ 0.87
RTN4-201ENST00000317610 DONSONQ9NYP3 566 aa20.51■□□□□ 0.87
RTN4-201ENST00000317610 WHRNQ9P202 907 aa20.51■□□□□ 0.87
RTN4-201ENST00000317610 TP73O15350 636 aa20.5■□□□□ 0.87
RTN4-201ENST00000317610 CACNB3P54284 484 aa20.5■□□□□ 0.87
RTN4-201ENST00000317610 GALNTL6Q49A17 601 aa20.5■□□□□ 0.87
RTN4-201ENST00000317610 ZNF746Q6NUN9 644 aaPredicted RBP20.5■□□□□ 0.87
RTN4-201ENST00000317610 MIGA2Q7L4E1 593 aa20.5■□□□□ 0.87
RTN4-201ENST00000317610 SERPINB12Q96P63 405 aa20.5■□□□□ 0.87
RTN4-201ENST00000317610 UNC45AQ9H3U1 944 aa20.5■□□□□ 0.87
RTN4-201ENST00000317610 AAASQ9NRG9 546 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms