RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 SLC39A6Q13433 755 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 PTK2BQ14289 1009 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 SLC45A4Q5BKX6 768 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 ESCO1Q5FWF5 840 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 PATL1Q86TB9 770 aaKnown RBP4.79□□□□□ -1.64
CNOT1-201ENST00000317147 PYROXD1Q8WU10 500 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 CCT6BQ92526 530 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 CNKSR1Q969H4 720 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 CYTH2Q99418 400 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 NYXQ9GZU5 481 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 MOV10Q9HCE1 1003 aaKnown RBP4.79□□□□□ -1.64
CNOT1-201ENST00000317147 C1orf112Q9NSG2 853 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 DDX56Q9NY93 547 aaKnown RBP4.79□□□□□ -1.64
CNOT1-201ENST00000317147 PTPRUQ92729 1446 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 PNPLA7Q6ZV29 1317 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 CFAP69A5D8W1 941 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 MT-ND3P03897 115 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 SRGNP10124 158 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 MX2P20592 715 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 CNTFP26441 200 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 ADD1P35611 737 aaKnown RBP4.79□□□□□ -1.64
CNOT1-201ENST00000317147 PPARGP37231 505 aaPredicted RBP4.79□□□□□ -1.64
CNOT1-201ENST00000317147 NAA20P61599 178 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 C2orf54Q08AI8 447 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 TFCP2Q12800 502 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 NAB2Q15742 525 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 ZNF572Q7Z3I7 529 aaPredicted RBP4.79□□□□□ -1.64
CNOT1-201ENST00000317147 ZNF804AQ7Z570 1209 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 RASSF3Q86WH2 238 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 REXO1L1PQ8IX06 675 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 SMYD4Q8IYR2 804 aaPredicted RBP4.79□□□□□ -1.64
CNOT1-201ENST00000317147 CLIC6Q96NY7 704 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 RPS6KC1Q96S38 1066 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.79□□□□□ -1.64
CNOT1-201ENST00000317147 IGSF1Q8N6C5 1336 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 SERPINB9P50453 376 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 TUBA1BP68363 451 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 BLMHQ13867 455 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 RSBN1LQ6PCB5 846 aaPredicted RBP4.79□□□□□ -1.64
CNOT1-201ENST00000317147 B3GNT6Q6ZMB0 384 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 ACAD11Q709F0 780 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 TUBA1AQ71U36 451 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 TMEM126BQ8IUX1 230 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 SPDYE1Q8NFV5 336 aaPredicted RBP4.79□□□□□ -1.64
CNOT1-201ENST00000317147 THAP11Q96EK4 314 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 C1orf50Q9BV19 199 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 TIPINQ9BVW5 301 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 KLHL4Q9C0H6 718 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 DBNLQ9UJU6 430 aaKnown RBP4.79□□□□□ -1.64
CNOT1-201ENST00000317147 CCPG1Q9ULG6 757 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 PIK3C2BO00750 1634 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 PNMA8CA0A1B0GUJ8 204 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 SAGE2PA6NJ88 616 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 CCNT1O60563 726 aaKnown RBP4.79□□□□□ -1.64
CNOT1-201ENST00000317147 PDE5AO76074 875 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 ZNF18P17022 549 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 HADHAP40939 763 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 PSMC1P62191 440 aaKnown RBP4.79□□□□□ -1.64
CNOT1-201ENST00000317147 INPP5AQ14642 412 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 CEP55Q53EZ4 464 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 ZBTB41Q5SVQ8 909 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 TPH2Q8IWU9 490 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 ACRBPQ8NEB7 543 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 PAGE5Q96GU1 130 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 NDEL1Q9GZM8 345 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 DDX25Q9UHL0 483 aaKnown RBP4.79□□□□□ -1.64
CNOT1-201ENST00000317147 PCDHA4Q9UN74 947 aa4.79□□□□□ -1.64
CNOT1-201ENST00000317147 SMIM23A6NLE4 172 aa4.78□□□□□ -1.64
CNOT1-201ENST00000317147 NUDT17P0C025 328 aa4.78□□□□□ -1.64
CNOT1-201ENST00000317147 RARGP13631 454 aa4.78□□□□□ -1.64
CNOT1-201ENST00000317147 ATP4AP20648 1035 aa4.78□□□□□ -1.64
CNOT1-201ENST00000317147 SP100P23497 879 aaPredicted RBP4.78□□□□□ -1.64
CNOT1-201ENST00000317147 SMARCA1P28370 1054 aa4.78□□□□□ -1.64
CNOT1-201ENST00000317147 S100A5P33763 92 aa4.78□□□□□ -1.64
CNOT1-201ENST00000317147 ARFIP2P53365 341 aa4.78□□□□□ -1.64
CNOT1-201ENST00000317147 GRAMD1BQ3KR37 738 aa4.78□□□□□ -1.64
CNOT1-201ENST00000317147 DCAF17Q5H9S7 520 aaPredicted RBP4.78□□□□□ -1.64
CNOT1-201ENST00000317147 GPATCH4Q5T3I0 446 aaKnown RBP4.78□□□□□ -1.64
CNOT1-201ENST00000317147 NAIF1Q69YI7 327 aaPredicted RBP4.78□□□□□ -1.64
CNOT1-201ENST00000317147 C11orf63Q6NUN7 778 aa4.78□□□□□ -1.64
CNOT1-201ENST00000317147 ALKBH5Q6P6C2 394 aaKnown RBP4.78□□□□□ -1.64
CNOT1-201ENST00000317147 TMEM154Q6P9G4 183 aa4.78□□□□□ -1.64
CNOT1-201ENST00000317147 NFATC2IPQ8NCF5 419 aa4.78□□□□□ -1.64
CNOT1-201ENST00000317147 LRRN4CLQ8ND94 238 aa4.78□□□□□ -1.64
CNOT1-201ENST00000317147 XAGE3Q8WTP9 111 aa4.78□□□□□ -1.64
CNOT1-201ENST00000317147 PPWD1Q96BP3 646 aaKnown RBP4.78□□□□□ -1.64
CNOT1-201ENST00000317147 SH3GL2Q99962 352 aa4.78□□□□□ -1.64
CNOT1-201ENST00000317147 TMBIM4Q9HC24 238 aa4.78□□□□□ -1.64
CNOT1-201ENST00000317147 CNGB3Q9NQW8 809 aa4.78□□□□□ -1.64
CNOT1-201ENST00000317147 TMOD3Q9NYL9 352 aa4.78□□□□□ -1.64
CNOT1-201ENST00000317147 COL3A1P02461 1466 aaPredicted RBP4.78□□□□□ -1.64
CNOT1-201ENST00000317147 CYP21A2P08686 494 aa4.78□□□□□ -1.64
CNOT1-201ENST00000317147 PSMC2P35998 433 aaKnown RBP4.78□□□□□ -1.64
CNOT1-201ENST00000317147 GJA8P48165 433 aa4.78□□□□□ -1.64
CNOT1-201ENST00000317147 USP11P51784 963 aa4.78□□□□□ -1.64
CNOT1-201ENST00000317147 RAP1GDS1P52306 607 aa4.78□□□□□ -1.64
CNOT1-201ENST00000317147 PLTPP55058 493 aa4.78□□□□□ -1.64
CNOT1-201ENST00000317147 ATP2C1P98194 919 aaPredicted RBP4.78□□□□□ -1.64
CNOT1-201ENST00000317147 PTGDRQ13258 359 aa4.78□□□□□ -1.64
CNOT1-201ENST00000317147 CYTH1Q15438 398 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms