RNA–Protein interactions for RNA: ENST00000316448.9

CALR-201, Transcript of calreticulin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALR, Length 1,903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-201ENST00000316448 VAMP7P51809 220 aa17.13■□□□□ 0.33
CALR-201ENST00000316448 MTHFD1LQ6UB35 978 aa17.13■□□□□ 0.33
CALR-201ENST00000316448 TSC1Q92574 1164 aa17.13■□□□□ 0.33
CALR-201ENST00000316448 MINDY3Q9H8M7 445 aa17.13■□□□□ 0.33
CALR-201ENST00000316448 NHEJ1Q9H9Q4 299 aaPredicted RBP17.13■□□□□ 0.33
CALR-201ENST00000316448 CEP72Q9P209 647 aa17.13■□□□□ 0.33
CALR-201ENST00000316448 MYADML2A6NDP7 307 aa17.13■□□□□ 0.33
CALR-201ENST00000316448 MAPK13O15264 365 aa17.13■□□□□ 0.33
CALR-201ENST00000316448 TRPA1O75762 1119 aa17.13■□□□□ 0.33
CALR-201ENST00000316448 GARTP22102 1010 aa17.13■□□□□ 0.33
CALR-201ENST00000316448 LIG4P49917 911 aa17.13■□□□□ 0.33
CALR-201ENST00000316448 WNT7BP56706 349 aa17.13■□□□□ 0.33
CALR-201ENST00000316448 POLR2FP61218 127 aaKnown RBP17.13■□□□□ 0.33
CALR-201ENST00000316448 STRN3Q13033 797 aa17.13■□□□□ 0.33
CALR-201ENST00000316448 MXD4Q14582 209 aaPredicted RBP17.13■□□□□ 0.33
CALR-201ENST00000316448 GRIK4Q16099 956 aa17.13■□□□□ 0.33
CALR-201ENST00000316448 SNRNP35Q16560 246 aaKnown RBP17.13■□□□□ 0.33
CALR-201ENST00000316448 EXOC3L4Q17RC7 722 aa17.13■□□□□ 0.33
CALR-201ENST00000316448 ZBTB41Q5SVQ8 909 aa17.13■□□□□ 0.33
CALR-201ENST00000316448 PDXDC1Q6P996 788 aa17.13■□□□□ 0.33
CALR-201ENST00000316448 GJB7Q6PEY0 223 aa17.13■□□□□ 0.33
CALR-201ENST00000316448 ZNF662Q6ZS27 426 aa17.13■□□□□ 0.33
CALR-201ENST00000316448 RRAGAQ7L523 313 aa17.13■□□□□ 0.33
CALR-201ENST00000316448 FAM84AQ96KN4 292 aa17.13■□□□□ 0.33
CALR-201ENST00000316448 MFSD14AQ96MC6 490 aa17.13■□□□□ 0.33
CALR-201ENST00000316448 POP1Q99575 1024 aaKnown RBP17.13■□□□□ 0.33
CALR-201ENST00000316448 SETD4Q9NVD3 440 aa17.13■□□□□ 0.33
CALR-201ENST00000316448 ZNF215Q9UL58 517 aaPredicted RBP17.13■□□□□ 0.33
CALR-201ENST00000316448 LRRC53A6NM62 1247 aa17.12■□□□□ 0.33
CALR-201ENST00000316448 EIF3CLB5ME19 914 aaKnown RBP17.12■□□□□ 0.33
CALR-201ENST00000316448 IQCF3P0C7M6 154 aa17.12■□□□□ 0.33
CALR-201ENST00000316448 CYBAP13498 195 aa17.12■□□□□ 0.33
CALR-201ENST00000316448 CYLC1P35663 651 aaPredicted RBP17.12■□□□□ 0.33
CALR-201ENST00000316448 VEGFBP49765 207 aa17.12■□□□□ 0.33
CALR-201ENST00000316448 SP3Q02447 781 aa17.12■□□□□ 0.33
CALR-201ENST00000316448 PPFIA1Q13136 1202 aa17.12■□□□□ 0.33
CALR-201ENST00000316448 ARHGAP29Q52LW3 1261 aa17.12■□□□□ 0.33
CALR-201ENST00000316448 KLHDC7AQ5VTJ3 777 aa17.12■□□□□ 0.33
CALR-201ENST00000316448 CRELD2Q6UXH1 353 aaPredicted RBP17.12■□□□□ 0.33
CALR-201ENST00000316448 INTS8Q75QN2 995 aaKnown RBP17.12■□□□□ 0.33
CALR-201ENST00000316448 EXOC8Q8IYI6 725 aa17.12■□□□□ 0.33
CALR-201ENST00000316448 LMO3Q8TAP4 145 aa17.12■□□□□ 0.33
CALR-201ENST00000316448 NLRP4Q96MN2 994 aa17.12■□□□□ 0.33
CALR-201ENST00000316448 PPP1R16BQ96T49 567 aa17.12■□□□□ 0.33
CALR-201ENST00000316448 EIF3CQ99613 913 aaKnown RBP17.12■□□□□ 0.33
CALR-201ENST00000316448 JPH2Q9BR39 696 aaPredicted RBP17.12■□□□□ 0.33
CALR-201ENST00000316448 IRX2Q9BZI1 471 aaPredicted RBP17.12■□□□□ 0.33
CALR-201ENST00000316448 COL1A2P08123 1366 aa17.12■□□□□ 0.33
CALR-201ENST00000316448 GTPBP10A4D1E9 387 aaKnown RBP17.11■□□□□ 0.33
CALR-201ENST00000316448 KIF5CO60282 957 aa17.11■□□□□ 0.33
CALR-201ENST00000316448 SLU7O95391 586 aaKnown RBP17.11■□□□□ 0.33
CALR-201ENST00000316448 F2P00734 622 aa17.11■□□□□ 0.33
CALR-201ENST00000316448 PLEKP08567 350 aaPredicted RBP17.11■□□□□ 0.33
CALR-201ENST00000316448 GCLMP48507 274 aa17.11■□□□□ 0.33
CALR-201ENST00000316448 NLRP11P59045 1033 aaKnown RBP17.11■□□□□ 0.33
CALR-201ENST00000316448 CHMP4BP1P59074 171 aa17.11■□□□□ 0.33
CALR-201ENST00000316448 GBP6Q6ZN66 633 aa17.11■□□□□ 0.33
CALR-201ENST00000316448 SYN2Q92777 582 aaPredicted RBP17.11■□□□□ 0.33
CALR-201ENST00000316448 FAM213AQ9BRX8 229 aa17.11■□□□□ 0.33
CALR-201ENST00000316448 NUCKS1Q9H1E3 243 aaKnown RBP17.11■□□□□ 0.33
CALR-201ENST00000316448 IFT122Q9HBG6 1241 aa17.11■□□□□ 0.33
CALR-201ENST00000316448 PLCB1Q9NQ66 1216 aa17.11■□□□□ 0.33
CALR-201ENST00000316448 TOPORSQ9NS56 1045 aaPredicted RBP17.11■□□□□ 0.33
CALR-201ENST00000316448 ARHGAP20Q9P2F6 1191 aa17.11■□□□□ 0.33
CALR-201ENST00000316448 MYO1AQ9UBC5 1043 aa17.11■□□□□ 0.33
CALR-201ENST00000316448 ABLIM1O14639 778 aa17.11■□□□□ 0.33
CALR-201ENST00000316448 MAGEB2O15479 319 aa17.11■□□□□ 0.33
CALR-201ENST00000316448 CSDE1O75534 798 aaKnown RBP17.11■□□□□ 0.33
CALR-201ENST00000316448 VTNP04004 478 aa17.11■□□□□ 0.33
CALR-201ENST00000316448 KRT13P13646 458 aa17.11■□□□□ 0.33
CALR-201ENST00000316448 YY1P25490 414 aa17.11■□□□□ 0.33
CALR-201ENST00000316448 CASQ1P31415 396 aa17.11■□□□□ 0.33
CALR-201ENST00000316448 PTENP60484 403 aa17.11■□□□□ 0.33
CALR-201ENST00000316448 CYP24A1Q07973 514 aa17.11■□□□□ 0.33
CALR-201ENST00000316448 KIAA0753Q2KHM9 967 aa17.11■□□□□ 0.33
CALR-201ENST00000316448 SEZ6Q53EL9 994 aa17.11■□□□□ 0.33
CALR-201ENST00000316448 ZNF710Q8N1W2 664 aa17.11■□□□□ 0.33
CALR-201ENST00000316448 GPD1LQ8N335 351 aa17.11■□□□□ 0.33
CALR-201ENST00000316448 PARD3BQ8TEW8 1205 aa17.11■□□□□ 0.33
CALR-201ENST00000316448 CCDC127Q96BQ5 260 aa17.11■□□□□ 0.33
CALR-201ENST00000316448 GCNT4Q9P109 453 aa17.11■□□□□ 0.33
CALR-201ENST00000316448 Q9Y3F1 56 aa17.11■□□□□ 0.33
CALR-201ENST00000316448 FHOD1Q9Y613 1164 aa17.11■□□□□ 0.33
CALR-201ENST00000316448 A0A0B4J269 797 aa17.1■□□□□ 0.33
CALR-201ENST00000316448 LRRIQ3A6PVS8 624 aaPredicted RBP17.1■□□□□ 0.33
CALR-201ENST00000316448 HAS3O00219 553 aa17.1■□□□□ 0.33
CALR-201ENST00000316448 B4GALT5O43286 388 aa17.1■□□□□ 0.33
CALR-201ENST00000316448 ABL1P00519 1130 aa17.1■□□□□ 0.33
CALR-201ENST00000316448 PRKCBP05771 671 aa17.1■□□□□ 0.33
CALR-201ENST00000316448 ABCD1P33897 745 aa17.1■□□□□ 0.33
CALR-201ENST00000316448 ACOT2P49753 483 aa17.1■□□□□ 0.33
CALR-201ENST00000316448 KRT83P78385 493 aa17.1■□□□□ 0.33
CALR-201ENST00000316448 NCBP1Q09161 790 aaKnown RBP17.1■□□□□ 0.33
CALR-201ENST00000316448 CACNA2D4Q7Z3S7 1137 aa17.1■□□□□ 0.33
CALR-201ENST00000316448 KIAA0319LQ8IZA0 1049 aa17.1■□□□□ 0.33
CALR-201ENST00000316448 LMBR1Q8WVP7 490 aa17.1■□□□□ 0.33
CALR-201ENST00000316448 ERO1AQ96HE7 468 aa17.1■□□□□ 0.33
CALR-201ENST00000316448 ACO2Q99798 780 aaKnown RBP17.1■□□□□ 0.33
CALR-201ENST00000316448 TMEM117Q9H0C3 514 aa17.1■□□□□ 0.33
CALR-201ENST00000316448 FZD8Q9H461 694 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms